LOC110529351 (LOC106571138)


Basic Information

Item Value
gene id LOC110529351
gene name LOC106571138
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 10218620 ~ 10232963 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611487.2
agggggaaggGTGGAGTCAAAGAGGGAGCCCCGGAGAAAGTAGGAGGAAAtgacagagagaagggaaagcagggcagagggagaaagagaggaggccatagagatagagagagatacagagggggtTTGGAAGTAGGAATACACAGATGAGAGAGCATAAGAGGAAGCCAAACAGACAgcagtgcagacagacagacagacatcattgcagacagacagacatcattgcagacagacagacatcattgcagacagacagacagacagacagccagacagacagacagacagacagacagaggcatgtCCACCCAACCGGGTCCCCAGCACAGGGTCTTGTTCCAAACCCCAGGTGAGGAGAAGGCGGAAGAGGAGCCTCCTCAACGCAGACTGGGAAAACTCACGGTCAAGTACAACCGCAAGGACCTGCAAAAGAGGCTGGACATCGAGGAGTGGATTGACGGGCAGCTGCATCTCCTGTTCGACTGTGAGGAGGAGGATATTCCAGAGTTAGAAATTGACATGGATGAGTTGCTGGATCTATCAGACGCAGAACAGAGAGCAAAGCTACATGACCTTCTTCAAGACTGTGACAAGCCCAAAGAGGACTTCATCGACGGCTTGCTGTATCGTATGAAGGGACTTCGCAAGATGTCCCTGAAAAAATGAACAAAAGTTGGACCATGTGAAATGAGACACCATTGTCTCTCACCTGTAGCTGTGGATGTGTGTACAGTGACAGTCCTCATGTATCTAGATATATCCTTATGTATCCACAATCTGCACTATCAGTGTCTATATTAGTGGTTGGCAGCACTTGTCAAAGAGGGTCCCCATGGCCAGTCCGTCCTGACCTTATATTATTAGGACCATTTGATACCATATATGTCTTACTCACATAAGCCTGGTGGGTCTTCCAATGGGGCATCtgtgtaaaactgagtttaaatatgaCGTAATATAGCATAGAGATGTCCTACTAGATTCAAACACCTCTTGGTATCAGTTGCCTCTGAAGTAGAATGAGAGATCCAGTCTAGTGTTGATGGATTATCCAGTCTATCGTTTATGTAGATGTTTTTCACTGTTATGTTACAGAATGGTTCACCAATTCACCATGGCCTGGTTTGTTATGTTCTTCGGTGTTAATGGACACTTCTGGCATTTTGAATAATCAGATCACAGCTTATGTTGacattcttttttattttttctgaattttttctgaaatgttttctctgatgaatcccctgcTATGACTAGCCCAAGAATGTACTGTCGTgactttggctatgccggattaagtaaTATGATATGCTATTCTATATTAATATcgcctgattgagctaatcatgtaaatgtaattaactagagagtcaggcaccacaaaataatatttatagagctgttatcttccgaataaactcttaaagacctagtaatattttacatcaatagcagtcaacattaatcatcaccttaattcagtctcatctgaaagttgtagaTTCTTagttatctgcatgaaccctggctaacaatttgaatcagcaatacaaaattgggtttaattatttatttactaaatacctaactaatcacacagaattacacatacacacaattaatcataacttgattacaaattacgtcataaaggaaaacgtccctagcgggcggaacagtcTTTATATAGAAAGGGAGAAAAGggttgtgtttcatagtttacaacctctgtctcttcacgtgggcaggcagaatctctatgttaaccaagagttttgcaaatgtaacctcagtagggtagagagaggaaaaagggttGGACTGTCATAAACCAATcccccaggccaatgtcatgacagtACTGTAAATATGGTTACTAACACTTTTGTTTATCTTAAAGTATTGTTTTAAAAGAGGCAGTGCTCTCATTAACTGTTACATCGGAATTTCAAATGTGATCTCCAATTGAAAATATGTGTACTGTGATGTTACCTATGATATTCTGGAAAATATCACCTAAAACAAATTCACTTCAATCCATAAAAGGGCAGTTAGGCATCACAGAATGTCGACGAGCCTTGGATCCGCTAAAGATCCCAATGGGGGGGGATCGAAACTTTTTCTCTTTGTGAATTTCAATAAATCAATGGAAGCATA

Function

NR:

description
protein phosphatase 1 regulatory subunit 14B-like isoform X1

GO:

id name namespace
GO:0042325 regulation of phosphorylation biological_process
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611487.2 True 2163 mRNA 0.41 4 10218620 10232963

Neighbor

gene id symbol gene type direction distance location
LOC110529349 NA coding downstream 6076 10194850 ~ 10212544 (-)
LOC110529348 LOC106571135 coding downstream 27508 10152795 ~ 10191112 (-)
myh6 LOC102786665 coding downstream 70037 10140669 ~ 10148583 (-)
LOC110529344 LOC106571131 coding downstream 132210 10080837 ~ 10086410 (-)
kif26aa LOC106571127 coding downstream 225168 9825982 ~ 10013023 (-)
mycn LOC106571147 coding upstream 553243 10786206 ~ 10792867 (-)
mrpl19 mrpl19 coding upstream 688628 10921591 ~ 10932463 (-)
LOC110529363 tram2 coding upstream 915145 11148108 ~ 11162069 (-)
LOC110529362 LOC106571157 coding upstream 929471 11162434 ~ 11184353 (-)
LOC110529181 LOC106571156 coding upstream 952774 11185737 ~ 11210434 (-)
G671879 NA non-coding downstream 66641 10151257 ~ 10151979 (-)
G671874 NA non-coding downstream 81098 10137298 ~ 10137522 (-)
G671873 NA non-coding downstream 81460 10136710 ~ 10137160 (-)
G671872 NA non-coding downstream 83325 10134788 ~ 10135295 (-)
G671871 NA non-coding downstream 84836 10133374 ~ 10133784 (-)
G671925 NA non-coding upstream 13217 10246180 ~ 10246388 (-)
G671927 NA non-coding upstream 21740 10254703 ~ 10254927 (-)
G671938 NA non-coding upstream 33636 10266599 ~ 10267809 (-)
G672120 NA non-coding upstream 57298 10290261 ~ 10290472 (-)
G672122 NA non-coding upstream 61550 10294513 ~ 10294712 (-)
G671820 NA other downstream 96647 10034772 ~ 10121973 (-)
G671122 NA other downstream 870741 9346384 ~ 9347879 (-)
G670905 NA other downstream 953527 9263850 ~ 9265093 (-)
G670733 LOC107575789 other downstream 1256889 8949694 ~ 8961731 (-)
G672436 LOC107575789 other upstream 505261 10738224 ~ 10738686 (-)
G673053 NA other upstream 1111510 11344473 ~ 11344782 (-)
LOC110529377 LOC106571175 other upstream 1751871 11984834 ~ 11997491 (-)
G673863 NA other upstream 1785653 12018616 ~ 12025742 (-)
G673867 NA other upstream 1907407 12140370 ~ 12141994 (-)

Expression


Co-expression Network