mrpl19 (mrpl19)


Basic Information

Item Value
gene id mrpl19
gene name mrpl19
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 10921591 ~ 10932463 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611497.2
TGCATGTCGCGTCTCTCTTGAGACACATCCCTTTTCGGCTTCCGTAACAATTCACATGGACAGCGAAGGTCAGCTTCCAATATGGCTGCTAGCACAAGAAAGCTTGACAAAGTTATGTTTTCAATAAAGCTGTTACGGAATATACAACAGCAAAATGAACGTTTCTTGTCCACGTCTATGCGTCGCCTCGCCGAGGGGAGTGACGGTGGCAAGCCAACAAAATTCACCCCTCCACCAAAACCTGTCATAATTGACAAAACACAGTCCGAGGCTTCACTGCGAAAGTTCCTGAGTCCAGAATTCATCCCTCCCCGACAGAGAATAAACCCACTGAAGTTCGCAATTGAGCGCAAAGacatgatccagaggaggaaagTGCTGAACATTCCGGAGTTTTATGTTGGGAGTGTCTTAGCTGTGACCATGGCGGACCCTCATGCCAGCGGCAAAACCAACCGCTTTATGGGCATCTGCATCCAGAGAGGTGGCCATGGACTGGGAGCCACATTTGTCCTTAGGAATATTATCGACGGCCAAGgagTTGAGATCTGCTATGAAATGTATAGCCCACGGCTGCAGCAGCTGGAGGTGCTGAAGCTGGAGAAAAGGCTGGACAACAATCTGATGTACCTGAGAGACGCCCTGCCCGAGTACAGCACCGTGAACTTGGACATGAAGCCTGTGCCCCACTCTGTCACCGGGGACGTGCCCGTCAATAAAACCAGAGTGCGGATGCGTCCTAAGCCGTGGTCCAAGCGCTGGGAGCGGCCCAAGTACAACGTGCAGGGCATCCGCTTCGACCTGTGTCTGTCGCCCGAGAAGCTGGAGCACGCCCAGAAGTGGGCGGAGCCCTGGCGGGAGTATGACATGCTGAAAGAGTACGACACCACGGCCCTGGAGGAGCGCTTCCTTAAGGAGGTGCAGACAGAGATGAGCAAGTCAACATCCCCCTAACCCTCTTAACCAGGGGTGGGTACTTCCAGTAAGAGGGTGGGTAGTTCAATAAGAGGGTGGGTAGTTCAATAAGAGGGAGGGTAGCTCCAGTAAGAGGGTGGGTAGTTCAATAAGCGGGTGGGTAGCTCCAGTAAGAGGGTGGGTAGTTCAATAAGCGGGTGGGTAGCTCCAGTAAGAGGGTGGGTAGTTCAATAAGCGGGTGGGTAGCTCCAGTAAGAGGGTGGGTAGTTCAATAAGTGGGTGGGTAGCTCCAGTAAGAGGGTGGGTAGTTCAATAAGCGGGTGGGTAGCTCCAGTAAGAGGGTGGGTAGTTCAATAAGCGGGTGGGTAGCTCCAGTGAGCGGGTGGGTAGCCCCAGTAAGCAGGTGGGTAGCTCCAGTGAGCGGGTGGGTAGTTCAATAAGCGGGTGGGCAGCCCCAGTAAGCGGGTGGGTAGTTCAATAAGCGGGTGGGTAGTTCAATAAGCGGGTGGGCAGCCCCAGTAAGCGGGTGGGTAGTTCAATAAGCGGGTGGGTAGTTCAATAAGCGGGTGGGCAGCCCCAGTAAGCGGGTGGGTAGTTCAATAAGCGGGTGGGTAGTTCAATAAGCGGGTGGGCAGCCCCAGTAAGCGGGTGGGTAGTTCAATAAGCGGGTGGGCAGCCCCAGTAAGCGGGTGGGCAGTTCAATAAGCGGGTGGGCAGCTCCAGTGAGCGGGTGGGTAGTTCAATAAGCGGGTGGGCAGCTCCAGTGAGAGGGTGGGCAGCTCCAGTGAGAGGGTGGGCAGCTCCAGTGAGAGGGTGGGCAGCTCCAGTGAGCGGGTGGGCAGCTCCAGTGAGAGGGTGGGCAGCCCCAGTGAGAGGGTGGGCAGCTCCAGTGAGAGGGTGGGCAGCTCCAGTGAGCGGGTGGGCAGCTCCAGTGAGCGGGTGGGCAGCTCCAGTGAGAGGGTGGGCAGCTCCAGTGAGAGGGTGGGCAGCTCCAGTGAGAGGGTGGGCAGCTCCAGTGAGCGGGTGGGCAGCTCCAGTGAGAGGGTGGGCAGCCCCGGCTGCAGTGTGCTGGTTTTACTGTCAAATCAATACATTACATAAAGTTGTGGAAAACAAATCTCGTTTATTCACTCAATGAGCAATTAGTGACATGAATAGATGGATGAAGTGGCTGGGAGATGAAAAGCCCTTGACAGTACTGCCTCTGAGGAACAGTGTTCAGCCATCCCTGTTAAGCTCTTTCAACACTCGATGGCCCTCGGTCTTCCACCCGTCTCCATGTACATGATGTCtggtgagaggtggagaggaacatTTAGGAGTCAATCACCCAGGGACGATGGTGGAACCGTCTGCATAGCTGTGGTTACCTGCTTGCTTCATCGTATCTTGTATTGTATGTCTGGAAAAGTGTTTATGCATatcaatgtgcagttgcaagtaTCCATTTCTAAATTAAAAAGCTGTTAAACATG

Function

symbol description
mrpl19 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL19 (mitochondrial ribosomal protein L19).

NR:

description
39S ribosomal protein L19, mitochondrial

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02884 RP-L19, MRPL19, rplS; large subunit ribosomal protein L19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611497.2 True 2390 mRNA 0.54 6 10921591 10932463

Neighbor

gene id symbol gene type direction distance location
mycn LOC106571147 coding downstream 128724 10786206 ~ 10792867 (-)
LOC110529351 LOC106571138 coding downstream 688628 10218620 ~ 10232963 (-)
LOC110529349 NA coding downstream 709047 10194850 ~ 10212544 (-)
LOC110529348 LOC106571135 coding downstream 730479 10152795 ~ 10191112 (-)
myh6 LOC102786665 coding downstream 773008 10140669 ~ 10148583 (-)
LOC110529363 tram2 coding upstream 215645 11148108 ~ 11162069 (-)
LOC110529362 LOC106571157 coding upstream 229971 11162434 ~ 11184353 (-)
LOC110529181 LOC106571156 coding upstream 253274 11185737 ~ 11210434 (-)
LOC110529367 LOC105021682 coding upstream 422882 11355345 ~ 11520698 (-)
LOC118965492 LOC106560407 coding upstream 814592 11747055 ~ 11764400 (-)
G672660 NA non-coding downstream 123110 10797693 ~ 10798481 (-)
G672639 NA non-coding downstream 174909 10746412 ~ 10746682 (-)
G672429 NA non-coding downstream 191990 10729386 ~ 10729601 (-)
G672426 NA non-coding downstream 192925 10728464 ~ 10728666 (-)
G672423 NA non-coding downstream 194957 10726114 ~ 10726634 (-)
G672745 NA non-coding upstream 18952 10951415 ~ 11003315 (-)
G672754 NA non-coding upstream 36100 10968563 ~ 10972832 (-)
G672755 NA non-coding upstream 36229 10968692 ~ 10972011 (-)
G672810 NA non-coding upstream 140931 11073394 ~ 11074025 (-)
G672832 eva1a non-coding upstream 194779 11127242 ~ 11129081 (-)
G672436 LOC107575789 other downstream 182905 10738224 ~ 10738686 (-)
G671820 NA other downstream 799618 10034772 ~ 10121973 (-)
kif26aa LOC106571127 other downstream 948779 9825982 ~ 10013023 (-)
G671122 NA other downstream 1573712 9346384 ~ 9347879 (-)
G670905 NA other downstream 1656498 9263850 ~ 9265093 (-)
G673053 NA other upstream 412010 11344473 ~ 11344782 (-)
LOC110529377 LOC106571175 other upstream 1052371 11984834 ~ 11997491 (-)
G673863 NA other upstream 1086153 12018616 ~ 12025742 (-)
G673867 NA other upstream 1207907 12140370 ~ 12141994 (-)
G674015 NA other upstream 1351374 12283837 ~ 12284220 (-)

Expression


Co-expression Network