Gene
RNA
| Item | Value |
|---|---|
| gene id | nrbp1 |
| gene name | LOC106571192 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 12414867 ~ 12431334 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nuclear receptor-binding protein-like |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| id | description |
|---|---|
| K08875 | NRBP; nuclear receptor-binding protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036984791.1 | False | 3873 | mRNA | 0.46 | 18 | 12414867 | 12431334 |
| XM_036984792.1 | True | 3870 | mRNA | 0.46 | 18 | 12414867 | 12431334 |
12,408,000
12,410,000
12,412,000
12,414,000
12,416,000
12,418,000
12,420,000
12,422,000
12,424,000
12,426,000
12,426,000
12,428,000
12,430,000
12,432,000
12,434,000
12,436,000
12,438,000
12,440,000
12,442,000
12,444,000
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| znf106b | LOC106571191 | coding | upstream | 41532 | 12348710 ~ 12373335 (+) |
| LOC110529396 | LOC106571190 | coding | upstream | 70020 | 12331195 ~ 12344847 (+) |
| LOC110529393 | LOC106571186 | coding | upstream | 141310 | 12267095 ~ 12273557 (+) |
| LOC110529392 | LOC106571236 | coding | upstream | 172053 | 12236880 ~ 12242814 (+) |
| ttc32 | ttc32 | coding | upstream | 183626 | 12229382 ~ 12231241 (+) |
| rhag | LOC106571195 | coding | downstream | 90061 | 12521395 ~ 12537133 (+) |
| si:ch211-22i13.2 | LOC106571196 | coding | downstream | 106262 | 12537596 ~ 12542040 (+) |
| dtl | LOC106571202 | coding | downstream | 276055 | 12707389 ~ 12716018 (+) |
| ppp2r5a | LOC106571204 | coding | downstream | 284960 | 12716294 ~ 12793228 (+) |
| opn8c | LOC106571230 | coding | downstream | 368016 | 12799350 ~ 12813450 (+) |
| G674060 | NA | non-coding | upstream | 67366 | 12345959 ~ 12347501 (+) |
| G674057 | NA | non-coding | upstream | 91745 | 12322774 ~ 12323122 (+) |
| G674056 | NA | non-coding | upstream | 92217 | 12321655 ~ 12322650 (+) |
| G674053 | NA | non-coding | upstream | 99204 | 12315014 ~ 12315663 (+) |
| G674052 | NA | non-coding | upstream | 101214 | 12313429 ~ 12313653 (+) |
| G674098 | NA | non-coding | downstream | 1114 | 12432448 ~ 12432783 (+) |
| G674188 | NA | non-coding | downstream | 142750 | 12574084 ~ 12574309 (+) |
| G674189 | NA | non-coding | downstream | 143171 | 12574505 ~ 12574737 (+) |
| G674192 | NA | non-coding | downstream | 146489 | 12577823 ~ 12578284 (+) |
| G674356 | NA | non-coding | downstream | 171588 | 12602922 ~ 12603131 (+) |
| matn3a | LOC106571183 | other | upstream | 191661 | 12214214 ~ 12224367 (+) |
| LOC118965493 | LOC106607564 | other | upstream | 384529 | 12028902 ~ 12035474 (+) |
| G673590 | NA | other | upstream | 475715 | 11933681 ~ 11939152 (+) |
| LOC110529360 | eva1a | other | upstream | 1287444 | 10936067 ~ 11128126 (+) |
| G674668 | NA | other | downstream | 753879 | 13185213 ~ 13185592 (+) |
| G674669 | LOC105902936 | other | downstream | 754773 | 13186107 ~ 13186497 (+) |
| G675212 | hsp90ab1 | other | downstream | 1120866 | 13552200 ~ 13554063 (+) |
| G675607 | NA | other | downstream | 1343338 | 13774672 ~ 13775272 (+) |
| G675705 | NA | other | downstream | 1424326 | 13855660 ~ 13856282 (+) |
