XLOC_025730



Basic Information


Item Value
gene id XLOC_025730
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 51758345 ~ 51758711 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052377
ACTACTGGTCTCTACTCTCAtaagtagcgatattagtttacttgGTGCAGAcgcgtttgcgatggtgtacgtggtgttaaattttacatatagctgccacttgcatggCAGACAGCATCTGGTGATtcaatgaaggattaaacagaagctcttgtgctagatgtggcaaacagttacctgaaaattccatcccacagacttttcatagcgaaCGTGAAGCCAATGGAaatcttttatccactcttcgaaaagtgtagatggtggaataacatttagcacatgatcactactaggatatgtcattatttgtaactttagatgtcatggtttctaaaacagaaaatatgtCAGTGTAattttcattctc

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052377 True 367 lncRNA 0.38 1 51758345 51758711

Neighbor


gene id symbol gene type direction distance location
XLOC_025728 chmp6a coding upstream 80763 51660158 ~ 51677582 (+)
XLOC_025727 ttyh2l coding upstream 100623 51563695 ~ 51657722 (+)
XLOC_025726 NA coding upstream 311349 51417422 ~ 51446996 (+)
XLOC_025725 NA coding upstream 735288 51011289 ~ 51023057 (+)
XLOC_025724 NA coding upstream 949152 50808637 ~ 50809193 (+)
XLOC_025731 NA coding downstream 136613 51895324 ~ 51900899 (+)
XLOC_025732 FUT9 coding downstream 320087 52078798 ~ 52089800 (+)
XLOC_025733 FUT9 coding downstream 333888 52092599 ~ 52110809 (+)
XLOC_025734 adgre14 coding downstream 386800 52145511 ~ 52166846 (+)
XLOC_025735 NA coding downstream 465392 52224103 ~ 52264146 (+)
XLOC_025429 BX649540.1 misc upstream 21509309 30248739 ~ 30249036 (+)
XLOC_025723 NA non-coding upstream 962128 50795321 ~ 50796217 (+)
XLOC_025721 BX649397.1 non-coding upstream 1205597 50537127 ~ 50552748 (+)
XLOC_025737 BX511132.1 non-coding downstream 608591 52367302 ~ 52379472 (+)
XLOC_025738 NA non-coding downstream 618867 52377578 ~ 52389039 (+)
XLOC_025739 NA non-coding downstream 631541 52390252 ~ 52392205 (+)

Expression



Co-expression Network