Gene
RNA
| Item | Value |
|---|---|
| gene id | ppp2r5a |
| gene name | LOC106571204 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 12716294 ~ 12793228 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform-like |
| id | description |
|---|---|
| K11584 | PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036984800.1 | True | 4747 | mRNA | 0.44 | 13 | 12716294 | 12793228 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dtl | LOC106571202 | coding | upstream | 276 | 12707389 ~ 12716018 (+) |
| si:ch211-22i13.2 | LOC106571196 | coding | upstream | 174254 | 12537596 ~ 12542040 (+) |
| rhag | LOC106571195 | coding | upstream | 179161 | 12521395 ~ 12537133 (+) |
| nrbp1 | LOC106571192 | coding | upstream | 284960 | 12414867 ~ 12431334 (+) |
| znf106b | LOC106571191 | coding | upstream | 342959 | 12348710 ~ 12373335 (+) |
| opn8c | LOC106571230 | coding | downstream | 6122 | 12799350 ~ 12813450 (+) |
| LOC100136248 | LOC100136248 | coding | downstream | 57577 | 12850805 ~ 12857368 (+) |
| rsph3 | rsph3 | coding | downstream | 72339 | 12865567 ~ 12871765 (+) |
| ezrb | ezr | coding | downstream | 79611 | 12872839 ~ 12928556 (+) |
| kcnk3a | LOC106571210 | coding | downstream | 317731 | 13110959 ~ 13117525 (+) |
| G674435 | NA | non-coding | upstream | 16141 | 12699871 ~ 12700153 (+) |
| G674434 | NA | non-coding | upstream | 16647 | 12699441 ~ 12699647 (+) |
| G674433 | NA | non-coding | upstream | 17095 | 12698605 ~ 12699199 (+) |
| G674432 | NA | non-coding | upstream | 18211 | 12697812 ~ 12698083 (+) |
| G674390 | NA | non-coding | upstream | 63039 | 12651562 ~ 12653255 (+) |
| G674541 | NA | non-coding | downstream | 157965 | 12951193 ~ 12952851 (+) |
| G674567 | NA | non-coding | downstream | 178591 | 12971819 ~ 12972564 (+) |
| G674542 | NA | non-coding | downstream | 325583 | 13118811 ~ 13120316 (+) |
| G674629 | NA | non-coding | downstream | 334623 | 13127851 ~ 13128401 (+) |
| G674666 | NA | non-coding | downstream | 390772 | 13184000 ~ 13184328 (+) |
| matn3a | LOC106571183 | other | upstream | 493088 | 12214214 ~ 12224367 (+) |
| LOC118965493 | LOC106607564 | other | upstream | 685956 | 12028902 ~ 12035474 (+) |
| G673590 | NA | other | upstream | 777142 | 11933681 ~ 11939152 (+) |
| LOC110529360 | eva1a | other | upstream | 1588871 | 10936067 ~ 11128126 (+) |
| G674668 | NA | other | downstream | 391985 | 13185213 ~ 13185592 (+) |
| G674669 | LOC105902936 | other | downstream | 392879 | 13186107 ~ 13186497 (+) |
| G675212 | hsp90ab1 | other | downstream | 758972 | 13552200 ~ 13554063 (+) |
| G675607 | NA | other | downstream | 981444 | 13774672 ~ 13775272 (+) |
| G675705 | NA | other | downstream | 1062432 | 13855660 ~ 13856282 (+) |
