ppp2r5a (LOC106571204)


Basic Information

Item Value
gene id ppp2r5a
gene name LOC106571204
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 12716294 ~ 12793228 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984800.1
ATGTCTGCACAAGTTTGAATTCCAGTCTTGGTTCCCCATTCTGAATAATTAGCTGTGTCACTACCATATCACACTATAAGTCATGAGTATTCACAAAGGCCATGAGACTAAAATTACCATTAGTAAAGTCTGTCAGATTACCCTACAACATATTTAGATGATAATGCAGCAAGCAAGTCCCTAGACATGACAATACTTACAAAAGTACATTAAAACCAAACTTTGGGTGAGTTAGTAGTGTTGTTAGTACTACATTATAACAGTTCACAGCCCATGCAATGCTGTTCAAAGGTTTCTGACACTGGTCTCCAACCTGTTTTTCCAGTATACTTTCCACTTCTGTTGTTGTAACTTGACATGTGTTTGCACTGTGTTAATCCTGtcttcacatacacacatttttaCTGAAAGGAGACTAAGAATGCATGATAGTTTGTAGTCCTGTCAACCTGCAACATTCTTTTGTGTCTGTCTGAAACATGGATGTCTGGTGTCTGAGCTAGTGCCTCCATGAGAACATTTTCTTCTGCTCTCTGCATGTGATCACATGTGCAAAGGTTAGCATGCTACTAGTGCTGGGGGCTTACAGAGGATCACATGATTGTGGGGTCAAACAATCTTTTTAACCTCACACCACACTGTTGGATCTCTGCTGCAAATATAGGTGACATTAATTGGATGTTAATGGATAAATATAGTAAGTGATGTAATTGCCTGGCCTCAAAAGAAGCACTCGTCTGAAATGACAATGTTGACATGTTTTGTTTATATGGACACCGTATCCTGCCTATTTATAAACGTTTCCAGTTGCCAATTTACTGGTATTTGTTTTCTGATCATATTGTCACATGGTTTAGAGCCCAGTCTTcaattggtttaaaaaaaaaggcATGAGCATGCCTGTTTCAACATTTTGGTTGGACACTGCAGTTGTCTGTCAAAGACGTAAACTTTTGTCACTAAATGCAACCCGACAACGATGTACTCATAAAGCTGTTAATGGTTGCACTGAGTTTGCAGTGTGGCGGATTTTTACATGGAATTGTGTAATCTAATAAATCGAAAAAGTTATTGACGTCCGAGCACAAGTAAAAAGTGATTATCGGTGTGTTCAGTGCAACTCGATATTTCCGACTAAATGGACACGGGAAAGTACTGAACATGACTCCATTGGCGCCGTGGTTCTTCCGATATACGAACGTTGCTGAGTAGTTCGAGGTTGCCAGACTTCATTCGTCCAGACTGTTTTTTCATTTTGACAAAGCCAACTGCTGCTAGAAGACACGGAATACAATATTTATTTTTCTTGTGGGAAATAGTATGAATTTCATCATGACAGTTCGCTTTAAATTGTAAATGTTCATATTATCTAGTTAACGGTACGTTTTAACGAAgcagctagccagatagctaacgttagccaagcAGCCAGCTGGCTAGCATTAGCATTTTTTGTCTGTCATTTAAAAAGCTAGCACTGACAGCTAGTCTTATGCTAGTTAGCATAGGTGTTCTCTCtgaagtagctaacgttagccggtTAGCTATACAAATGACAATTATAGCAACAGGTTGCTATATTGCAGAAATTACAATTTAAATATACCCAGCAATTTAGTTAAGCAGTGTTTCTGCTGTCAGTCTATTAGCTAACGTCTACCTAGATACGTTTTCTCAAATCTGTCATGAGTTGGCTGGCTTGTTGATACGCGTAGCgttagctaacgctagctagttTTCTAAACAGCTCGCTGGACTCAACAAGCGGGACGAAAATGCGGGCTTTACATGGAAACTGATTAACTAGCAAGCTTCAGTGGATCAAACAAGCAGAAGGTGTTTTTCAAAGTTTGATGCTTACGCCATTTCAAGTTGCAGAAGATTTTGATGCTCCTGAACTGGGAGACATAGACCACTTGTGGGAAACCCTAAATCTATCGTTGGTGCACATGTCCAAAAATACTTTTACGATACAGTTGATGCTTCAAAATGTCGGCTATCTCTGCGTCTGAGAAAGTGGACGGGTTCACGCGAAAATCAATGAGGAAGGCCCAGAAACAGAAGAAATCTCAAGGGTCGTCCCAGTTCCGAACTCAAACTTTTACCGAGCTTTCACCCTTGCCGCAGCTCAAagATGCACCCTCCACAGAGCAGCAGGAGCTGTTCACCCAGAAGCTCCAGCAGTGCTGCATGCTGTTTGACTTCATGGACTCTGTCACCGACCTGAAGAGCAAGGAGATCAAGCGGGCCACGCTCAACGAGCTGGTGGACTACGTCTCCACCAACAGGGGCATCCTGGTAGAGGCAGCCTATCCGGAGATCTCAAATATGATCTGCACCAACATATTCCGGACTCTTCCGCCGAGTGAGAACCCTGATTTTGACCCAGAGGAGGACGAGCCTACTCTCGAGGCCTCATGGCCACACATACAGCTTGTCTACGAGTTCCTCCTGCGATTCTTGGAGAACCCAGACTTTCAGCCCAGCATCGCCAAGCGCTACATTGATCAGAAGTTTGTGCTGCAGCTCCTGGAACTGTTTGACAGCGAGGACCCCCGGGAGAGGGACTTCCTGAAGACAGTCCTGCATCGGATCTACGGGAAGTTCCTGGGGTTGCGGGCTTTCATCAGGAAGCAGATCAACAACATCTTCTTGCGGTTCATCTACGAGACTGATCACTTCAACGGAGTGGCCGAACTCCTGGAGATACTGGGGAGCATCATCAATGGCTTTGCACTGCCATTGAAGGCGGAACACAAGCAGTTCCTGATGAAGGTGCTCATCCCCATGCATACCGCCAAAGGACTGGCCCTGTTCCACGCACAGCTGGCCTACTGTGTCGTCCAGTTCCTGGAGAAGGACCCCACCCTCACAGAGCCGGTGATTCGGGGGCTGTTGAAGTTTTGGCCCAAAACCTGTAGCCAGAAGgagGTGATGTACCTGGGGGAAATGGAGGAGATCCTGGATGTCATTGAGCCCACCCAGTTCAAGAAGATCCAAGAGCCCCTGTTCAAGCAGATCTCCAGATGTGTGGCCAACCCCCACTTCCAGGTAGCGGAGAGAGCCCTCTACTTCTGGAACAACGAGTACATCCTGAGCCTGATTGAGGAGAACATCGACAAGATTCTGCCTATCATGTTTGGTAGCCTGTACAGAATCTCCAAAGAACACTGGAACCCGACGATTGTAGCTCTGGTCTACAACGTGCTGAAGACCCTGATGGAGATGAACAGCACACTATTTGACGAGCTGACAGCCTCTTACAAATCAGACAGACAGCGggagaagaagaaggagcaggagagggaggagctgTGGAAGAAGCTGGATGAGCTGAAGCTGAGCGACGCTGCGGCTCTGGTGCAGAACAACAGCCACGGGCTCcagaacaacaacagcaacaacaacaatcacCAAGAAAACCAGGAGAAGGGCACCGCTGTCATTGCAACGGACCATGAAGACCCTGTCGTCGCCATGGATACCGCAGAGAATGTCAAGGGCGTCAAGACTGCCAAATGACACAGGACTCCATTTTGTACTCTGTAACGGTTTCCAGGCCGTCTGAGAACTGTCAGGGAGGGGCTTGGGGGTGATGGGGAGGAGGGGCTTGGGGGTGACGCGGAGGAGGGGCTTGGGGGTGACAGGGAGGAGGGGCTTGAGAAACTagccacacaaaaaaaaaagagataaACCTCATCAGTATGTTAAATCTATATACAGTAAAACTACTTCAAATGCCAGAAATTCTCCTTTGGCAGAAAACGTATATTTCAACTTAAGACTATTTTGGGATGTTACAGTGTGACCACAGTATATTGGTAAACTTTTTTTGTCTGATCAAAGAATTTATCCTTTCACATTTAGTTTCTTAACTGAGAaaagtttttttttgggggggggggggtgatattcAATGTATGAAAATATAGGAGGGGGAGAAAATGACTTGAAAATAACCTTTCTGATTGTGCTGCACTTCGAGAAGCTAAATGGCTATTTTAAGATGTCTATTTTGTATGTGCTTTCATCACTGCTGCCAACATAGGGGTGCAAACTGTAAGGAAGAGGGGGTCGGGGGTGAGCTttggagggtgggtgggtgggtggggggctaTGGAGAGAGGACTGTGTTAATAGTCTCTACATAGGAGACCTGAGTGAATGTCACTATCATGAGGTCTTGTGTTTTCGGGTGTTTGGTATATGTATCTGAATACATGAAGCTTAATGTTATAGCCGTTATTATAGCACATTCAAGAACTGCAGCCATACAACCTATTTACAGTAAGTATTTGAAATGAGTTTAGTTTAGAGAAAAGAACGATGAAACGGGCACAGATTTAAGTAAGTATAACATATTTTTCCAGTCTGAATAGAGAATTGATTAATAGATAATGCCGATGTAGAAAAAGGTAATGAAATGAGCCATATATTTTTTTCCCAGAGTATTGTTAAAGGCAGAGATGTGGATTTTTGAAGCCAGATGGTGGCAGATTGCCGATAGTCTGGTTTCTGCAGATTTAAACGTGGCTGGATGAAGTGTGTGCGTATGTGGGTCAGGGGTGTTTGCTTTAACGTGTCTGTTCTCTATTGTAGGTCCAGTCTTTTCTGATGCCTTTTCTGTCAGAGTGTACCATTCCAATCTCTGTGACATGCAACTGTGTGGGGAACCTGTTTTGTAATAACTGACCTTATCTaggttttaaataaaaaataaagtctacCATATGTTTCTACTCTAAAA

Function

NR:

description
serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform-like

GO: NA

KEGG:

id description
K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984800.1 True 4747 mRNA 0.44 13 12716294 12793228

Neighbor

gene id symbol gene type direction distance location
dtl LOC106571202 coding upstream 276 12707389 ~ 12716018 (+)
si:ch211-22i13.2 LOC106571196 coding upstream 174254 12537596 ~ 12542040 (+)
rhag LOC106571195 coding upstream 179161 12521395 ~ 12537133 (+)
nrbp1 LOC106571192 coding upstream 284960 12414867 ~ 12431334 (+)
znf106b LOC106571191 coding upstream 342959 12348710 ~ 12373335 (+)
opn8c LOC106571230 coding downstream 6122 12799350 ~ 12813450 (+)
LOC100136248 LOC100136248 coding downstream 57577 12850805 ~ 12857368 (+)
rsph3 rsph3 coding downstream 72339 12865567 ~ 12871765 (+)
ezrb ezr coding downstream 79611 12872839 ~ 12928556 (+)
kcnk3a LOC106571210 coding downstream 317731 13110959 ~ 13117525 (+)
G674435 NA non-coding upstream 16141 12699871 ~ 12700153 (+)
G674434 NA non-coding upstream 16647 12699441 ~ 12699647 (+)
G674433 NA non-coding upstream 17095 12698605 ~ 12699199 (+)
G674432 NA non-coding upstream 18211 12697812 ~ 12698083 (+)
G674390 NA non-coding upstream 63039 12651562 ~ 12653255 (+)
G674541 NA non-coding downstream 157965 12951193 ~ 12952851 (+)
G674567 NA non-coding downstream 178591 12971819 ~ 12972564 (+)
G674542 NA non-coding downstream 325583 13118811 ~ 13120316 (+)
G674629 NA non-coding downstream 334623 13127851 ~ 13128401 (+)
G674666 NA non-coding downstream 390772 13184000 ~ 13184328 (+)
matn3a LOC106571183 other upstream 493088 12214214 ~ 12224367 (+)
LOC118965493 LOC106607564 other upstream 685956 12028902 ~ 12035474 (+)
G673590 NA other upstream 777142 11933681 ~ 11939152 (+)
LOC110529360 eva1a other upstream 1588871 10936067 ~ 11128126 (+)
G674668 NA other downstream 391985 13185213 ~ 13185592 (+)
G674669 LOC105902936 other downstream 392879 13186107 ~ 13186497 (+)
G675212 hsp90ab1 other downstream 758972 13552200 ~ 13554063 (+)
G675607 NA other downstream 981444 13774672 ~ 13775272 (+)
G675705 NA other downstream 1062432 13855660 ~ 13856282 (+)

Expression


Co-expression Network