LOC110529457 (LOC106571244)


Basic Information

Item Value
gene id LOC110529457
gene name LOC106571244
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 14984532 ~ 15020390 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984846.1
ctggGCAGAGCTTTATGTTCTCGGGGATATCTCCTGGTGCTCAGGAAACAGATGTGACCCCACCCCCCACCTGTAATACACACATCCCGCTCGGGAAAAGCCCTTACACCATTGTTACTGTGGTTTCCGTCTGGTGATTGGTTCTTCCCCTGCCTCTCCTTTCTCCGACTGTGCCCCATACATCATAACTGCTGTAGATCTCAGAGTCAACActtccccctttcctccctctgtcacatgctctcttcctctctttcttcactTTCCCTTTCCCCTCTTCAGCGTCTGAACAGGAATAGGCATTCCATTGGCTTCAGAAGTTTCCATTGCTTCTATGCTTCAGGATAGGAACGATCGCGCTGAACagctgttgtgtgtgtctgtgtgcgtatctgtgtgtgtatgtatgtgtgttcatAGTGATCAAGGTAATAATTAAAGAGATTTTATTTGATCTCAATCAGACCTTGTTGGACTTTCCCATCTCACTATCCTTTGCACTTAATTAAGGCCTTTTTGCCTCTGTCTACCATAGCTGTGTTACAGTGCTAGTGATCCACAGGTGTTACAGGACCAGTGATCCACAGGTGTTACAGGACCAGTGATCCACAGGTGTTACAGGACCAGTGATCCACGGGTGTTACAGGATCAGGGATCCACAGGTGTTACAGGGCCAGGGATCCACAGGTGTTACAGGACCAGTGATCCACAGGTGTTACAGGACCAGGGATCCACAGGTGTTACAGGATCAGGGATCCACAGGTGTTACAGGACCAGGGATCCACAGGTATTACAGGACCAGTGATCCACAGGTGTTACAGGACCAGTGATCCACAGGTGTTACAGGACCAGTGATCCACAGGTGTTACAGGACCAGTGATCCACAGGTATTACAGGGCCAGTGATCCACAGGTGTTACAGAGCCAGGGATCCACAGGTATTACAGGGCCAGGGATCCACAGGTGTTACAGGGCCAGGGATCCACAGGTGTTACAGGGCCAGGGATCCACAGGTGTTACAGGGCCAGGGATCCACAGGTATTACAGAGCCAGGGGTCCACAGGTGTTACAGAGCCAGGGATCCACAGGTATTACAGGGCCAGGGATCCACAGGTGTTACAGGGCCAGGGATCCACAGGTGTTACAGGGCCAGGGATCCACAGGTGTTACAGGGCCAGGGATCCACAGGTATTACAGAGCCAGGGGTCCACAGGTGTTACAGAGCCAGGGATCCACAGGTATTACAGAGCCAGTGATCCACAGGTATTACAGAGCCAGTGATCCACAGGTATTACAGAGCACAGGTGTTAGCCTGCTATTAAACCCCTAGAGCTGTGTAGATATGAAAGGGTTGATTGTTCTCCCTTGccatcttcctccctcccttgttcACACACTTACGTTTACACTCAGCACaaacaaagacaaacacacacacacacttagaattTGATATAATTCAGGTAGACATGGAGGAGAATATGTTTTAATCAGAGGATGGGCCATGCAGGTTGCCATTGTGACTGGTCCTGAGTGTAGGGGGACTTGAGAACTTGGTCAGAGGGACTTGGTCATGAGAAAGACCCTGGAGTCATTAATCCTCTGTCACTCTACATTACAACAGAAAGGTaatggctgtgtctgaaatggcacccttttcactctgtagtgtactacttttggccagagccaaTGAGGGCCCATGAGACTggccaaaggtagtgcactatagatggaatagggtgacatttgggacgtaGGCAATGTTTGCTGAACCCAATCCAGTTGGTTTTGAATGGAATTGATtactttattttaattttatttatttaacctttatttatttatttaggcaagtcagttaagaacaaattcttatttacaatgacggcctaccccagccaaacccggacgacgctgggccaattgtgcggcgcccTATGGGACAATTACGTCTGGacgtgatgcagcctggaatgcaGCACACATGCTAATCACACTAATCAAAGCTCTGATAGCTGCATGTATGAACTATGGGGTGGAGACAGACAACCTGAAGACTCTGGTAGGTCGTATGAGAGCGGCATCCAACAACCTCCACAACTCAGCGTCGGAGCGCAGAAAGAACCTGTCATACGAGGGCAAGAAGTCCCACAAACCCCCCAATGACTTTCTCACTGCTGTCGTGGAGCTCATTGGAGCAGCCAAGAGTCTACTGGCCTGGTTGAACAGGACTTCTCTGACGGGGATCAGTGACTTCACCTGCACTAAGAACAGGATCATTCAGCTGTGTCTGGAGCTCACCTCCACCGTTCAGAAGGACTGCACAGTTTATGACATGGAGGAGAAGATTCTGGAAGTGtctgtggCTCTGAACGTGATCAGTGAGCAGACGATGAGGACGACCTCTGACCCCCAGAAGAGTCAGATGGCCTGTCTGGAGGAGGTCCATATCACGAACATCAGACCTAGGGATGGACTGGGGTTGTATATCAAATCTACCTACGACGGGCTTCACATCATCACTGGCACCACAGAACATTCTCCAGCAGACAGAACACACAGGATCCACGCAGGAGACGAGGTCGTCCAGGTCAACAAGCAGACAGTGGTGGGCTGGCAGCTGGACAACCTGGTAGGTAAGCTGAAGGCGGACCCAGCAGGCGTTACTCTGGTGGTGAAGAAGAGGCCCTCGGGTACCTTTAGCTTCACCCCGGCCCCCCTGAAAAACATGCGCTGGAGGCCCCTTCTGGTGCAGAGCGCCCTGAGTATGCCTAAGATCCAGGCCCCAAAACATGCCAGTGAAGCCCGCATGAAAAAAGAAAAGCCAGCCATTCTGGACCTATTTAttcctcctccccctactgtaccCTATACCCCACGAGATGAGAAGCCTACAGCCAGTGTCAAACTGAGACCGAAGGGTTCACAGTCTCCAAACTCCTTCCTGGATGAGGGCAGACGGCGCTTCACCATTGCAGACTATGACAACAAGATCAGAGTCTGCCCCCCTCCTGAGCCCAACCTCCAACCAGCCCAACCAGCCCCAGTAGCCCGCCTGAGACAACAGACATCCAGACGGGGTAAACCACGGCCCCTGTCCATGCCTGTAGACTCGTGTTTGGGCATGTCTGATTCATCCTCCAGACCCTGGCCCCAAGGGAGAAAAGGAGAGGACATCCTGCACAGATACCTGAGTAACGAGCGCATCGCCACCATCTCTGAGGAGGCCTCGTTCTTCCCCCTACCCTACAGACCCCTGGAGGGTCGATCTGGCCAGCTGGTCCGTGGCGTCGACCACATCCGGGGCTCCCAGTGCTTCATAAATGCTGACCTGCACAACAGCGCCACCATCCCCTACCAGGAGGCATCGTCGAAAAAGGTCCCGGCTACAATTATGACCCCTAGTGCTGCTGCTACTCCCAAACGCCCTCCGTCTGAACCCTCTTCGATCCTGGGGGGCTGGCTAGCCCGCCTCAGGCTGTTGAGTCATTGACGAGTGCCTCGACCTTGTGGACAGTGGAACGTGTGTCGCCCCCACTGCCTTTACCTTGCTATAATCTAACAGTGGTATGGTTTCTCCACTCAGTATTCTGACTAACACCTACCATACCTGGAACGTTCTGTTGGAACTTGGAACACTAAAACAGCTTTTGGAAGCTTCGCTTAATTTCAACGCCACATCGCCTAGGGGTAGACCATTTGGTTGGATCTCTCGCTTCATTTCAACGCCACATAGCCTAGGGGTAGACCATTTGGTTGGATCTCTCGCTTCATTTCAACGCCACATAGCCTAGGGGTAGACCATTTGGTTGGATCTCTCGCTTCATTTCAACTCCTTGGCGTGACAGACCTGGTTTAGATTCAATATGCTGACAGATTCAGAATGTTTCGTGGAGGAGTTTCTGTCTCTGCTCATTTTCCTAACCAAGAGAAGGACTATCATTCAGGTTTAGGGAACATTAGCCTTGCTTCTGTAGGTGAACTGTCCTATGTGTAAATTGTTAAGTTATTTAGTTTGTGTCTGTACAGATTTATTGTACATACGTTTAAAATCATTTTAAGAAGTTGATTTGATTTTTGTACcgttttattttgtatttcatttcATGAGTTGATATATAGACATAATTAAAGCCTATCGTTTTATTTGAGA
>XM_036984845.1
CTGTAAACTTGTTGTTTCCCCACATGCGATCGGTCTGTCATCCGGGCTGTAGCGGGAGAGGCGTGCGTGATAGGACTATGTTCATGTCATTTCGTTGTAGTTACATGTCTATTATGCCTTCTATGTGGAATTACTGATTTTTCATCTAGGCTAACCTAAAAGACAAAGGAAAAAAAGCCGGTTCAATTTTAGAGAGCACCATTTCAAAGATGGATCCCATAACAAAGTGGACTTCTAAACAAGTTGTAGATTGGATAAGAGGCCTGGACGACAGCCTACAGCAGTATGTCCCGTACTTTGAGCGTGAGAAGATTGACGGGGAGCAGCTGTTGAAGATCTCCCACCAGGACCTGCTAGAACTGGGTGTGACCAGGATTGGACACCAGGAACTGGTGCTGGAGGCAGTCGACCTGCTCTGTGCTCTGAACTATGGGGTGGAGACAGACAACCTGAAGACTCTGGTAGGTCGTATGAGAGCGGCATCCAACAACCTCCACAACTCAGCGTCGGAGCGCAGAAAGAACCTGTCATACGAGGGCAAGAAGTCCCACAAACCCCCCAATGACTTTCTCACTGCTGTCGTGGAGCTCATTGGAGCAGCCAAGAGTCTACTGGCCTGGTTGAACAGGACTTCTCTGACGGGGATCAGTGACTTCACCTGCACTAAGAACAGGATCATTCAGCTGTGTCTGGAGCTCACCTCCACCGTTCAGAAGGACTGCACAGTTTATGACATGGAGGAGAAGATTCTGGAAGTGtctgtggCTCTGAACGTGATCAGTGAGCAGACGATGAGGACGACCTCTGACCCCCAGAAGAGTCAGATGGCCTGTCTGGAGGAGGTCCATATCACGAACATCAGACCTAGGGATGGACTGGGGTTGTATATCAAATCTACCTACGACGGGCTTCACATCATCACTGGCACCACAGAACATTCTCCAGCAGACAGAACACACAGGATCCACGCAGGAGACGAGGTCGTCCAGGTCAACAAGCAGACAGTGGTGGGCTGGCAGCTGGACAACCTGGTAGGTAAGCTGAAGGCGGACCCAGCAGGCGTTACTCTGGTGGTGAAGAAGAGGCCCTCGGGTACCTTTAGCTTCACCCCGGCCCCCCTGAAAAACATGCGCTGGAGGCCCCTTCTGGTGCAGAGCGCCCTGAGTATGCCTAAGATCCAGGCCCCAAAACATGCCAGTGAAGCCCGCATGAAAAAAGAAAAGCCAGCCATTCTGGACCTATTTAttcctcctccccctactgtaccCTATACCCCACGAGATGAGAAGCCTACAGCCAGTGTCAAACTGAGACCGAAGGGTTCACAGTCTCCAAACTCCTTCCTGGATGAGGGCAGACGGCGCTTCACCATTGCAGACTATGACAACAAGATCAGAGTCTGCCCCCCTCCTGAGCCCAACCTCCAACCAGCCCAACCAGCCCCAGTAGCCCGCCTGAGACAACAGACATCCAGACGGGGTAAACCACGGCCCCTGTCCATGCCTGTAGACTCGTGTTTGGGCATGTCTGATTCATCCTCCAGACCCTGGCCCCAAGGGAGAAAAGGAGAGGACATCCTGCACAGATACCTGAGTAACGAGCGCATCGCCACCATCTCTGAGGAGGCCTCGTTCTTCCCCCTACCCTACAGACCCCTGGAGGGTCGATCTGGCCAGCTGGTCCGTGGCGTCGACCACATCCGGGGCTCCCAGTGCTTCATAAATGCTGACCTGCACAACAGCGCCACCATCCCCTACCAGGAGGCATCGTCGAAAAAGGTCCCGGCTACAATTATGACCCCTAGTGCTGCTGCTACTCCCAAACGCCCTCCGTCTGAACCCTCTTCGATCCTGGGGGGCTGGCTAGCCCGCCTCAGGCTGTTGAGTCATTGACGAGTGCCTCGACCTTGTGGACAGTGGAACGTGTGTCGCCCCCACTGCCTTTACCTTGCTATAATCTAACAGTGGTATGGTTTCTCCACTCAGTATTCTGACTAACACCTACCATACCTGGAACGTTCTGTTGGAACTTGGAACACTAAAACAGCTTTTGGAAGCTTCGCTTAATTTCAACGCCACATCGCCTAGGGGTAGACCATTTGGTTGGATCTCTCGCTTCATTTCAACGCCACATAGCCTAGGGGTAGACCATTTGGTTGGATCTCTCGCTTCATTTCAACGCCACATAGCCTAGGGGTAGACCATTTGGTTGGATCTCTCGCTTCATTTCAACTCCTTGGCGTGACAGACCTGGTTTAGATTCAATATGCTGACAGATTCAGAATGTTTCGTGGAGGAGTTTCTGTCTCTGCTCATTTTCCTAACCAAGAGAAGGACTATCATTCAGGTTTAGGGAACATTAGCCTTGCTTCTGTAGGTGAACTGTCCTATGTGTAAATTGTTAAGTTATTTAGTTTGTGTCTGTACAGATTTATTGTACATACGTTTAAAATCATTTTAAGAAGTTGATTTGATTTTTGTACcgttttattttgtatttcatttcATGAGTTGATATATAGACATAATTAAAGCCTATCGTTTTATTTGAGA

Function

NR:

description
connector enhancer of kinase suppressor of ras 3-like

GO:

id name namespace
GO:0009966 regulation of signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984846.1 False 4155 mRNA 0.50 13 14984532 15006222
XM_036984845.1 True 2552 mRNA 0.51 13 14984532 15020390

Neighbor

gene id symbol gene type direction distance location
LOC110529456 LOC106571246 coding downstream 3678 14971614 ~ 14980854 (-)
LOC110529190 LOC106571247 coding downstream 19219 14908875 ~ 14965313 (-)
LOC110529455 LOC106571248 coding downstream 82925 14888797 ~ 14901607 (-)
LOC110529452 LOC106571249 coding downstream 134089 14755991 ~ 14850443 (-)
LOC110529453 LOC105017813 coding downstream 235963 14723772 ~ 14748569 (-)
si:ch73-111k22.3 NA coding upstream 13525 15033915 ~ 15039013 (-)
ndufaf7 ndufaf7 coding upstream 85564 15105954 ~ 15118998 (-)
LOC110529461 NA coding upstream 101551 15121941 ~ 15124458 (-)
LOC110529463 LOC106571240 coding upstream 204985 15225375 ~ 15230012 (-)
LOC118965496 NA coding upstream 214409 15234799 ~ 15251367 (-)
G676822 NA non-coding downstream 97067 14884362 ~ 14887465 (-)
G676771 NA non-coding downstream 209980 14774026 ~ 14774552 (-)
G676753 NA non-coding downstream 258597 14725676 ~ 14725935 (-)
G676722 tieg3 non-coding downstream 288697 14693866 ~ 14695835 (-)
G676717 NA non-coding downstream 300447 14676954 ~ 14684085 (-)
G677114 NA non-coding upstream 12870 15033260 ~ 15033545 (-)
G677117 NA non-coding upstream 18813 15039203 ~ 15039434 (-)
G676635 LOC106571254 other downstream 468004 14508329 ~ 14516528 (-)
G676178 NA other downstream 696187 14287849 ~ 14288345 (-)
G676077 NA other downstream 776907 14206987 ~ 14207625 (-)
G675834 LOC106571238 other downstream 998424 13983626 ~ 13986108 (-)
G675415 NA other downstream 1498395 13485679 ~ 13486137 (-)
G679087 NA other upstream 1412231 16432621 ~ 16433014 (-)
G679210 LOC106571290 other upstream 1604700 16625090 ~ 16630259 (-)
G679471 NA other upstream 2093153 17113543 ~ 17114528 (-)
G681659 NA other upstream 3770840 18791230 ~ 18792137 (-)
G684844 NA other upstream 6458376 21478766 ~ 21479203 (-)

Expression


Co-expression Network