Gene
RNA
| Item | Value |
|---|---|
| gene id | crnkl1 |
| gene name | LOC106571265 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 15476954 ~ 15483621 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| crooked neck-like protein 1 |
| id | description |
|---|---|
| K12869 | CRN, CRNKL1, CLF1, SYF3; crooked neck |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021611651.2 | True | 2651 | mRNA | 0.49 | 14 | 15476954 | 15483621 |
15,471,000
15,472,000
15,473,000
15,474,000
15,475,000
15,476,000
15,477,000
15,478,000
15,479,000
15,480,000
15,481,000
15,482,000
15,483,000
15,484,000
15,485,000
15,486,000
15,487,000
15,488,000
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nkx2.1b | nkx2.1b | coding | upstream | 200023 | 15274628 ~ 15276931 (+) |
| LOC110529464 | LOC106571299 | coding | upstream | 216623 | 15258311 ~ 15260331 (+) |
| LOC110529462 | LOC106571241 | coding | upstream | 338769 | 15135212 ~ 15138185 (+) |
| LOC110529460 | NA | coding | upstream | 352904 | 15119099 ~ 15124050 (+) |
| LOC110529458 | LOC106571242 | coding | upstream | 371846 | 15039114 ~ 15105108 (+) |
| LOC110529475 | LOC106571272 | coding | downstream | 371001 | 15854622 ~ 15888522 (+) |
| LOC110529476 | LOC106571274 | coding | downstream | 408955 | 15892576 ~ 16023051 (+) |
| trnaa-ugc-22 | NA | coding | downstream | 479948 | 15963569 ~ 15963643 (+) |
| LOC110529479 | nt5e | coding | downstream | 752146 | 16235767 ~ 16246138 (+) |
| bub1 | LOC100306849 | coding | downstream | 809700 | 16293321 ~ 16301586 (+) |
| G677297 | NA | non-coding | upstream | 129445 | 15347278 ~ 15347509 (+) |
| G677288 | LOC100194703 | non-coding | upstream | 142787 | 15333945 ~ 15334167 (+) |
| G677286 | NA | non-coding | upstream | 144244 | 15332473 ~ 15332710 (+) |
| G677281 | NA | non-coding | upstream | 147329 | 15329387 ~ 15329625 (+) |
| G677280 | NA | non-coding | upstream | 148129 | 15328585 ~ 15328825 (+) |
| G677483 | NA | non-coding | downstream | 11608 | 15495229 ~ 15495469 (+) |
| G677485 | NA | non-coding | downstream | 16361 | 15499982 ~ 15500208 (+) |
| G677488 | NA | non-coding | downstream | 19978 | 15503599 ~ 15584266 (+) |
| G677539 | NA | non-coding | downstream | 104734 | 15588355 ~ 15588848 (+) |
| G677648 | NA | non-coding | downstream | 145977 | 15629598 ~ 15684714 (+) |
| G676919 | NA | other | upstream | 369811 | 15105603 ~ 15107143 (+) |
| LOC110529454 | LOC106571249 | other | upstream | 718030 | 14749575 ~ 14758924 (+) |
| G676226 | NA | other | upstream | 1113983 | 14360577 ~ 14362971 (+) |
| G675705 | NA | other | upstream | 1620672 | 13855660 ~ 13856282 (+) |
| G678417 | LOC106571283 | other | downstream | 901181 | 16384802 ~ 16385945 (+) |
| LOC110529493 | LOC106571284 | other | downstream | 903829 | 16387411 ~ 16390869 (+) |
| LOC110529505 | LOC106571335 | other | downstream | 1409538 | 16893102 ~ 16921697 (+) |
| G681909 | NA | other | downstream | 3680315 | 19163936 ~ 19165640 (+) |
| G682611 | NA | other | downstream | 4245212 | 19728833 ~ 19729671 (+) |
