Gene
RNA
| Item | Value |
|---|---|
| gene id | trnaa-ugc-22 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 15963569 ~ 15963643 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Deoxyribonuclease gamma precursor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnaa-ugc-22 | True | 75 | mRNA | 0.54 | 1 | 15963569 | 15963643 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529475 | LOC106571272 | coding | upstream | 75047 | 15854622 ~ 15888522 (+) |
| crnkl1 | LOC106571265 | coding | upstream | 479948 | 15476954 ~ 15483621 (+) |
| nkx2.1b | nkx2.1b | coding | upstream | 686638 | 15274628 ~ 15276931 (+) |
| LOC110529464 | LOC106571299 | coding | upstream | 703238 | 15258311 ~ 15260331 (+) |
| LOC110529462 | LOC106571241 | coding | upstream | 825384 | 15135212 ~ 15138185 (+) |
| LOC110529479 | nt5e | coding | downstream | 272124 | 16235767 ~ 16246138 (+) |
| bub1 | LOC100306849 | coding | downstream | 329678 | 16293321 ~ 16301586 (+) |
| LOC110529488 | htr1e | coding | downstream | 391737 | 16355380 ~ 16356858 (+) |
| znf292b | LOC106571280 | coding | downstream | 393735 | 16357378 ~ 16383176 (+) |
| LOC110529493 | LOC106571284 | coding | downstream | 423768 | 16387411 ~ 16390869 (+) |
| G677648 | NA | non-coding | upstream | 278855 | 15629598 ~ 15684714 (+) |
| G677539 | NA | non-coding | upstream | 374721 | 15588355 ~ 15588848 (+) |
| G677488 | NA | non-coding | upstream | 379303 | 15503599 ~ 15584266 (+) |
| G677485 | NA | non-coding | upstream | 463361 | 15499982 ~ 15500208 (+) |
| G677483 | NA | non-coding | upstream | 468100 | 15495229 ~ 15495469 (+) |
| G678305 | NA | non-coding | downstream | 190907 | 16154550 ~ 16154784 (+) |
| G678309 | NA | non-coding | downstream | 192661 | 16156304 ~ 16156673 (+) |
| G678332 | NA | non-coding | downstream | 201555 | 16165198 ~ 16165428 (+) |
| G678333 | NA | non-coding | downstream | 202263 | 16165906 ~ 16166126 (+) |
| G678326 | NA | non-coding | downstream | 257709 | 16221352 ~ 16280431 (+) |
| G676919 | NA | other | upstream | 856426 | 15105603 ~ 15107143 (+) |
| LOC110529454 | LOC106571249 | other | upstream | 1204645 | 14749575 ~ 14758924 (+) |
| G676226 | NA | other | upstream | 1600598 | 14360577 ~ 14362971 (+) |
| G675705 | NA | other | upstream | 2107287 | 13855660 ~ 13856282 (+) |
| G678417 | LOC106571283 | other | downstream | 421159 | 16384802 ~ 16385945 (+) |
| LOC110529505 | LOC106571335 | other | downstream | 929516 | 16893102 ~ 16921697 (+) |
| G681909 | NA | other | downstream | 3200293 | 19163936 ~ 19165640 (+) |
| G682611 | NA | other | downstream | 3765190 | 19728833 ~ 19729671 (+) |
