LOC110529479 (nt5e)


Basic Information

Item Value
gene id LOC110529479
gene name nt5e
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 16235767 ~ 16246138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984879.1
TTCTTTATATGCTGTATACACCTCTGTGGTAAAAGCTAAGACACTACAATTTTATAACTATAGAATGTGTACATGGGAAGGCACAATATTTTACCcaaattactctctctctctcttaaatgCTACGATTGGAGATGAACAGAGTCCACGCCTTCTGGTGCAGTCACTGAAAGTAGGGGGATAACTTCAGTGTTCTAATACACTGCGCGGGCAACGAGCAGATAAAATGGGAGTGCGTGAGCAGGTGAAGAGCATTTTATTATACCTCTGCGTCTGTAGTCATGTTTGTACTGAAGAGTGGGAACTCACGCTGCTTCATACCAACGATGTCCACGCACGGGTTGAGGAGACAAGCAAGGACTCCGGCAAATGCACCAAGCCTCCGTGTTTTGCCGGGGTGGCACGGAGATTTACGAAAATAAAGGAGATCCGGAACCGAGAGAAAAATGTGATGCTGCTGGACGCAGGCGATCAATTTCAAGGAACCGTTTGGTTTAATGTATATAAGGGAGCAGAGGCTGCACATTTTATGAACAAACTTGGCTACGATGCAATGGCTCTGGGGAATCATGAGTTTGACAATAAAGTGGAGGGACTTATCAAGCCGTTTCTCCAGGAGGTGAAGTGCACAGTCCTCAGTGCTAACATCAAAGCAGACGACACACTAGCACCTCGCATCAGTGGCCTTTATTTCCCTTATAAGGTATTTGATGTGGACTCTAAGAAAGTGGGCGTGGTGGGATACACATCAAAGGAGACGCCTGCTCTGTCACAAACAGGACCTAACTTAGTGTTTGAGGATGAGATTGATGCCCTCCAGCTCCAGGTTGACAAACTAATCACTTTGGGGGTCAACAAGATTATCGCCCTTGGTCACTCTGGCTTCGTTACAGACAAAGAAATAGCCAGAAGGGTAAAGGGTGTGGATGTGGTCATCGGAGGACATAGTAACACCTTTCTGTACACAGGAAAACAGCCTTCCTCTGAGGTCCCGGCAGGTCCCTACCCGGTCATAGTAAGGTCAGAGGGTGGGCGTGACGTCCCTGTGGTGCAGGCCTTTGCCTTTGGGAAATATCTGGGTTACCTCAAGGTAACGTTTGACGAAGCTGGCAACGTGCTCCAGTCCACAGGCAACCCCATCCTTCTGGACAGCTCTGTACCAGAGGACCCCAGTATTCTGGCTGAAGTCAACGAGTGGAAAAAGGCCCTGGCAAATTACTCCTCCCAGTATGTGGGGGAGACCCTGGTGTATCTCAATGGAACGTTTGAAGAGTGCAGGTTCCGAGAGTGCAACCTGGGAAACCTAATCTGTGACGCTATGGTACACCACAACATTAAATATGCAGATGAGCTTCAGTGGAACCATGTTAGCTCCTGCATCCTCCAAGGGGGATCGATACGGTCATCCATAGATGAGCGGAGTCGAAACGGTTCCATCACGATGGAGGACCTCATTGCTGTGTTGCCGTTTGGAGGCACCTATGATCTGGTTCAGCTGAAGGGATCTACTCTGAGGAAGACTTTTGAGCACTCCGTCAGGAGATATGGAGGGAACACAGGGGAATTCCTTCAAGTATCAGaacagcctcattcGTCTGGGAATAGACTACAAAtggtcgaaagcattccacagggatgctggccaatgttgactccaacaactgatgctactgagccagatgtctatgtgtcagggcagaagctccaggtggtatctgattttaagtaccttggcatcatacttaattccaacctctcttttaaaaagcaggtgaaaaaggtaattcaaataaccaaattcaatcTAGCTAATTTTTGATTTATACAATTTTTTttactacagaggtagcaaaactgtacttcaaatctatgatactcccccacttaacatactgcttgactagttggccccgagcttgctgtacaacattaaaacccattcagtctgtctacaaacaggctctcaaagtgcttgataggaagcccaatagccatcatcactatTACAttctcagaaagcatgagctcctgagttggaaaaatcttgtgcaataTACTGATGCATGTCTTGTATTTAAGATCCTAAATgacctggctccccctccactccactgGACCTGGctccaaacatatggcagcaggtccacaaggtctgccatgagaggtgactgtatagttcccttaaggaaaatcACCTTTAGTTAATCtgttttctctgtgagagcttcccatgtctggaatacactgccatcagacacacgtaactgcaccacctatcacactttcacaaaaaacatgaagacatggctaaaggtcaatcagatttgtgaacattaTCCCTAGTTGTGTATTGCTGCgttccatgttgtctgtagcttatgaggtgtggaaacactttgttgcttttatggatTTTGTCTTGTTGCTTTTTGTGCTATTTTGCTCTGTCTacatcttgcttgtcctatgttgctctgcgtgtgctcattGATTGTCTGTATTATTgtaattgtaattgtttttaataacctgcccagggactgcggttgaaaatttgccggctggctaaaaccgtcacttttactgaaacgttgattaatgtgcactgtccctgtaaaaataaactcaactcaatg
>XM_021611663.2
TATGCTGTATACACCTCTGTGGTAAAAGCTAAGACACTACAATTTTATAACTATAGAATGTGTACATGGGAAGGCACAATATTTTACCcaaattactctctctctctcttaaatgCTACGATTGGAGATGAACAGAGTCCACGCCTTCTGGTGCAGTCACTGAAAGTAGGGGGATAACTTCAGTGTTCTAATACACTGCGCGGGCAACGAGCAGATAAAATGGGAGTGCGTGAGCAGGTGAAGAGCATTTTATTATACCTCTGCGTCTGTAGTCATGTTTGTACTGAAGAGTGGGAACTCACGCTGCTTCATACCAACGATGTCCACGCACGGGTTGAGGAGACAAGCAAGGACTCCGGCAAATGCACCAAGCCTCCGTGTTTTGCCGGGGTGGCACGGAGATTTACGAAAATAAAGGAGATCCGGAACCGAGAGAAAAATGTGATGCTGCTGGACGCAGGCGATCAATTTCAAGGAACCGTTTGGTTTAATGTATATAAGGGAGCAGAGGCTGCACATTTTATGAACAAACTTGGCTACGATGCAATGGCTCTGGGGAATCATGAGTTTGACAATAAAGTGGAGGGACTTATCAAGCCGTTTCTCCAGGAGGTGAAGTGCACAGTCCTCAGTGCTAACATCAAAGCAGACGACACACTAGCACCTCGCATCAGTGGCCTTTATTTCCCTTATAAGGTATTTGATGTGGACTCTAAGAAAGTGGGCGTGGTGGGATACACATCAAAGGAGACGCCTGCTCTGTCACAAACAGGACCTAACTTAGTGTTTGAGGATGAGATTGATGCCCTCCAGCTCCAGGTTGACAAACTAATCACTTTGGGGGTCAACAAGATTATCGCCCTTGGTCACTCTGGCTTCGTTACAGACAAAGAAATAGCCAGAAGGGTAAAGGGTGTGGATGTGGTCATCGGAGGACATAGTAACACCTTTCTGTACACAGGAAAACAGCCTTCCTCTGAGGTCCCGGCAGGTCCCTACCCGGTCATAGTAAGGTCAGAGGGTGGGCGTGACGTCCCTGTGGTGCAGGCCTTTGCCTTTGGGAAATATCTGGGTTACCTCAAGGTAACGTTTGACGAAGCTGGCAACGTGCTCCAGTCCACAGGCAACCCCATCCTTCTGGACAGCTCTGTACCAGAGGACCCCAGTATTCTGGCTGAAGTCAACGAGTGGAAAAAGGCCCTGGCAAATTACTCCTCCCAGTATGTGGGGGAGACCCTGGTGTATCTCAATGGAACGTTTGAAGAGTGCAGGTTCCGAGAGTGCAACCTGGGAAACCTAATCTGTGACGCTATGGTACACCACAACATTAAATATGCAGATGAGCTTCAGTGGAACCATGTTAGCTCCTGCATCCTCCAAGGGGGATCGATACGGTCATCCATAGATGAGCGGAGTCGAAACGGTTCCATCACGATGGAGGACCTCATTGCTGTGTTGCCGTTTGGAGGCACCTATGATCTGGTTCAGCTGAAGGGATCTACTCTGAGGAAGACTTTTGAGCACTCCGTCAGGAGATATGGAGGGAACACAGGGGAATTCCTTCAAGTATCAGGATTTCATGTAGAGTATGATATGTCGAGGCCCCCTGGGGAGCGCGCTAGGAGTATTAGTGTGCTCTGTACGGACTGCCGGGTGCCAGTCTATGAGCCTCTGGACGACAGAAGGCTATACAAGGTGGTCCTGCCCTCATACATGGTGGAAGGAGGAGACGGATTCTCCATGATTAAAGAGGAGAACCTGAAACATGACAGCGGTGACATGGACATATCGGTGGTGGCCAGCTACATTGCTGAGAGGAAGAAGGTGCACCCGGCTATAGAGGGACGTATCAAGATTTCCAACTCAGCTTCAGGGGGGCCTGGTCACATGGCTCTGTTAATCATGCTGGTGCTAGTGATGGCTCTGTTTGGGAGACTATGAGAGATCCCTGGCTGCAATCATGATGCAAAGCTCACCATTGGATATGTTCTTCTCACCAACAGCATTCAAGGGAAGAGCTCAACTCTAGTTAGTCTATTGAGTACAAATTGAACAGGGATATGGTGAATGGATATTTCACCAATGCTCTCAGATTTTTCTTTCTAAATACTGCAGTTTGATATGAAATTCGCTATTGAAACTTCAGGGAAAATACTGTAAATGTATTATCCTATGGCAAAAACTAGAAATGATGCACTGGTAAGTCTCATGTACAGTCGCTGCTGTCAAGCTCTTGGTCTGCGATCCAGTTTGAGCATAAACATACATTTGCTTATGTACTCTTAACAGATGGAAACAGATGACCGGTGCTTGTTTAAGTGTGTGCCCCTGGCAGAGCCTGCTTAACCAGCATTAGGACTGAAGCGTTTCAGGTTTTgggtcatttccgattgagccgacatatgcagtctccgctaacgggggacattgcctttaaatgtcaaTCACGCTGTAGCACCGAATGTCCATGATACGGATAGAATAGACTTTATGAGATAGGGTGTCCAAACACAGAGCTCCAGAATAGTTATGTCAATATTTTGAAGCTCTTTTAGACATGAAATATAATCTCTCAAAGTGGGATAAACAAGTAGTGATCAACCTTTTGTAAACATTTAGAGAACTCTATTTACAGGACATACCCACTCAAAGTAACGAGGTAGCAGGAAACTGATACACTTGGTATTCTTgattcacacaggaaactgttgagtgaaaaacccagcagcgtggcagttcttgacacaaactggtgcgcccagcaccctattaccataccccgttcaaaggcactgaaatattttgtctttatcattcagattgaagtggatttaacaagtgacatcaataagggatcctagctttcacctgatcatggaaagaacaggtgttcttaatgttttgtacaccaaAGAGGGAATGTTTTTCTCTGAGTTGTAATTTCTAAATAGCCTATGATAAATTGTGACCTAACATTTTAGATTTGGTGTTGTGATATTGCAACAAGGTTGGTAATAGTACAATATACTGATGATATGTACCTAAAGCCTGAAGGTTATACAGGTAAATAAACAAATTGTTCTCCTTACTGTTTTTTGAACATCTAGCAGCTATTTCTGCATATAAAAACGGGTCACCAACTGTAACAATTCAACAGTAAAAATACCAATAAATTGTCATgaccagaagaagaaaaaagagcTCATCTTAAACTTgttaaaaacaaagaaaaacacaTGAACTATGAAATGCCGCCCAGGCGTAATTCCATTGAATGTAGTATTTCTCAAAGGAAAGAATTACATAACTTCCCTCACAGTTACTCTTTAACTTGTGAGTGGTGTAACCTTGAGCTTTGCTGCTCTCACTATTCATCAGATCTCTGTCAGGGCCACGGGTGTAGAGTAGTATTCTGAGGACAAGGACCATTCTGTCTCTGGATTGCTCACAGAAACACAAGCTTTATTATTCACAGGGGCCAGCTATTAGTCTCCACTGATGGCTCTGACCCAGCTGGCTCTGACCAGTGGGAATGTACATGGTGTTGCCAATTACCACATCCACGGAACACTGCATGGAAAGTATCTCCTTTTCACAGTGGACTAAAACATTATCAGGGCAGAAATGAGACTCCAAGGAGGGAAGGGAGATGGAAATCACATTAGGTCATATGCAGGACACAACCTCATTTTAGAAAACAGAAGCTG

Function

symbol description
nt5e Predicted to enable 5'-nucleotidase activity. Acts upstream of or within response to copper ion. Predicted to be located in membrane. Predicted to be anchored component of membrane. Predicted to be active in plasma membrane. Is expressed in brain and intestinal bulb. Human ortholog(s) of this gene implicated in hereditary arterial and articular multiple calcification syndrome. Orthologous to human NT5E (5'-nucleotidase ecto).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0046688 response to copper ion biological_process
GO:0009166 nucleotide catabolic process biological_process
GO:0046872 metal ion binding molecular_function
GO:0016788 hydrolase activity, acting on ester bonds molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K19970 NT5E, CD73; 5'-nucleotidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984879.1 False 2636 mRNA 0.45 8 16235767 16242921
XM_021611663.2 True 3707 mRNA 0.45 9 16235774 16246138

Neighbor

gene id symbol gene type direction distance location
LOC110529476 LOC106571274 coding upstream 212716 15892576 ~ 16023051 (+)
trnaa-ugc-22 NA coding upstream 272124 15963569 ~ 15963643 (+)
LOC110529475 LOC106571272 coding upstream 347245 15854622 ~ 15888522 (+)
crnkl1 LOC106571265 coding upstream 752146 15476954 ~ 15483621 (+)
nkx2.1b nkx2.1b coding upstream 958836 15274628 ~ 15276931 (+)
bub1 LOC100306849 coding downstream 47183 16293321 ~ 16301586 (+)
LOC110529488 htr1e coding downstream 109242 16355380 ~ 16356858 (+)
znf292b LOC106571280 coding downstream 111240 16357378 ~ 16383176 (+)
LOC110529493 LOC106571284 coding downstream 141273 16387411 ~ 16390869 (+)
LOC110529491 LOC106571281 coding downstream 145093 16391231 ~ 16406097 (+)
G678333 NA non-coding upstream 69641 16165906 ~ 16166126 (+)
G678332 NA non-coding upstream 70339 16165198 ~ 16165428 (+)
G678309 NA non-coding upstream 79094 16156304 ~ 16156673 (+)
G678305 NA non-coding upstream 80983 16154550 ~ 16154784 (+)
G677648 NA non-coding upstream 551053 15629598 ~ 15684714 (+)
LOC118965606 NA non-coding downstream 182601 16428557 ~ 16432253 (+)
G678449 NA non-coding downstream 186192 16432330 ~ 16432671 (+)
G678451 NA non-coding downstream 188371 16434509 ~ 16434734 (+)
G678453 NA non-coding downstream 190821 16436959 ~ 16437366 (+)
G678455 NA non-coding downstream 191933 16438071 ~ 16438380 (+)
LOC110529464 LOC106571299 other upstream 975777 15258311 ~ 15260331 (+)
G676919 NA other upstream 1128624 15105603 ~ 15107143 (+)
LOC110529454 LOC106571249 other upstream 1476843 14749575 ~ 14758924 (+)
G676226 NA other upstream 1872796 14360577 ~ 14362971 (+)
G675705 NA other upstream 2379485 13855660 ~ 13856282 (+)
G678417 LOC106571283 other downstream 138664 16384802 ~ 16385945 (+)
LOC110529505 LOC106571335 other downstream 647021 16893102 ~ 16921697 (+)
G681909 NA other downstream 2917798 19163936 ~ 19165640 (+)
G682611 NA other downstream 3482695 19728833 ~ 19729671 (+)

Expression


Co-expression Network