cfap206 (cfap206)


Basic Information

Item Value
gene id cfap206
gene name cfap206
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 16406235 ~ 16411381 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611728.2
ACCATGGCAACCGACGGGGAACTCGGACGCGGTGGGGAATTTACATGATCTCCGTAGCTTGAAACATGTCTCGTGCTCAAGCAGAAAGTGTGATAAAAAACATAATTCGAGAAATCGCCCAAGAATGTACCGGAAAAGGGCATGCTGTGTCAGAAACATTAGTGGCTTTCATGGTAAAAGCTGTTGTGTTGGACCCACGAAATCTATTTAACGTTGATCGGACTCTTACCAAGCAAGATGTTAGGAAACTTGTGGAATTGTGTGTGGACAAACTCCTGGACCAGGGGAGCCCTTCCGTTGACACAATCAAGATGCAAGTCTACTTCGACATGAATTACACATCTCGACGTGAGTTCATTGAGGAGCACCAGCGGGTACTACAGTCAAGGCTAGTCCCAGTGAGTCGAGAAATCACTGACAGCAGAGTGAAAACACGTGAGGATCTGGAGGGCCTTTACCGTAAGATCGTCAGCTATGTTCTGCTGCGCTCGGGCCTGGGTTCTTCCACAGACATCACTACAGTGCGAGAGGCTACAGCTGCCTTACAGAGCGTCTTTCCCCAGTCAGAGCTGGGGACCTTCATGTCCCTCATCAAGAAGGACAAGGAGCAACAGCTCAACGACCTCAGCATGATTGTGACTGGCATCCGTCTCTTCAACAAAGACagcaggaaaggaggagagggcaTAGACGACTTGCCAGCTATTCTGAATGAAGCCATTCCATCCACCAGTAAAGACATTGAATGGGAGCTGGAGCTTTCTCAGAGTTTGGCCTGGCAGTACACATCCTGTCTGGAGAGGCTCCTGGACCCTGAGGTTGAGACCAGAGAATGTATTGTTCCCCTGGACATGCTTAAACAGGCTCTCTATAATGTACGACAACATGAAGCCTTTCTCAAAGTTATTTTGGCAGATGTCATTCTATGTGCAAAGCAAGTTGAAACCCTACAGACTGAACTAGCGACACGTATGAAGCTTTTGAGGGTCACCGTACATTCAAAGACTGCAGTACCCACTGCACAGGTTTTTCCCCATTTCACAGCTCTGGCAAAGTTCTGGTCAGGTCTTCAAGATGAGATGGTGCTGTTGAGCATCCTGAGTAACATAATGGAGAACCTGCAGCCCTTCCTGGCTGCTCAGTCCCAGCTCTTCCCTGATGGTCAGTTGGAGGACATACTGGGGTTGGAGATCAAGAAGTACGAGCAGAGAATGAAGGAGTCTTCAGAAAACCGTATTGACCCCTATGAGATCAAAACACAAGAGTGGCTCTTGCCTGAGACAACAGCCAACTTTGACAAATTACCACTGCAGTACAATGGAATTTGTGGTTATACACTTGTGAAGAAGGATGGGCTTTTACTGCCAGGCAACCCAAGCATAGGAGTCCTGAAACATAGGGAGAAATACTATGTTTTCAGCTCCAAGGAGGCAGCTTTAAGATTTGGATCCAAGCCAGATGAGTACATTGCCCATGTGGCAGAGAAAGCAAAGCAGTCCCCTGAGCTTATCCAGCTCCTCCAACTCCACCAACAGTTTGCCTGTGTCACTCCATATcctgagATGCAGTCAGGGGAGAGATTGTTGGTAAAACCCATTACAAAGTGTGACAGCAGCACTCAGACAGACACTCATTTGTTGGAGACCAACATTGTGAAATCATATGAGTGGAATGAGTGGGAGCTGAggagaaaagcaatcaaattgGCCAATCTTCGTAGTAAAGTGACCCACTCAATGCAGACTAATCTAAGTCACATGAGGAGGGATAACGTCACCCAAACCTACCACCTCAAAGATGTTGCATGCCAGAGCAAGAGGGATGGCAGTAGCAATGTCCCCAAGCCTCAGGTTTACCTGGCTGGTCTTCGAGGAGGGAAAACCAAGACTACACATATGATAAAAACAAACTTGACCAGATCAGTAAGTGAATAACTGTCTATATTCAAGCAATAAAGATAACTTTGATGGAA

Function

symbol description
cfap206 Predicted to be involved in regulation of cilium beat frequency; regulation of flagellated sperm motility; and sperm axoneme assembly. Predicted to act upstream of or within cell projection organization. Located in motile cilium. Orthologous to human CFAP206 (cilia and flagella associated protein 206).

NR:

description
cilia- and flagella-associated protein 206-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611728.2 True 1972 mRNA 0.47 12 16406235 16411381

Neighbor

gene id symbol gene type direction distance location
LOC110529491 LOC106571281 coding upstream 138 16391231 ~ 16406097 (+)
LOC110529493 LOC106571284 coding upstream 15366 16387411 ~ 16390869 (+)
znf292b LOC106571280 coding upstream 23059 16357378 ~ 16383176 (+)
LOC110529488 htr1e coding upstream 49377 16355380 ~ 16356858 (+)
bub1 LOC100306849 coding upstream 104649 16293321 ~ 16301586 (+)
LOC110529494 slc35a1 coding downstream 2394 16413775 ~ 16423971 (+)
LOC118965606 NA coding downstream 17176 16428557 ~ 16432253 (+)
LOC110529497 LOC106571290 coding downstream 213462 16624843 ~ 16630268 (+)
LOC110529502 LOC106571295 coding downstream 382337 16793718 ~ 16826016 (+)
LOC110529505 LOC106571335 coding downstream 481721 16893102 ~ 16921697 (+)
G678326 NA non-coding upstream 125804 16221352 ~ 16280431 (+)
G678333 NA non-coding upstream 240109 16165906 ~ 16166126 (+)
G678332 NA non-coding upstream 240807 16165198 ~ 16165428 (+)
G678309 NA non-coding upstream 249562 16156304 ~ 16156673 (+)
G678305 NA non-coding upstream 251451 16154550 ~ 16154784 (+)
G678449 NA non-coding downstream 20949 16432330 ~ 16432671 (+)
G678451 NA non-coding downstream 23128 16434509 ~ 16434734 (+)
G678453 NA non-coding downstream 25578 16436959 ~ 16437366 (+)
G678455 NA non-coding downstream 26690 16438071 ~ 16438380 (+)
G678417 LOC106571283 other upstream 20290 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 1146245 15258311 ~ 15260331 (+)
G676919 NA other upstream 1299092 15105603 ~ 15107143 (+)
LOC110529454 LOC106571249 other upstream 1647311 14749575 ~ 14758924 (+)
G681909 NA other downstream 2752555 19163936 ~ 19165640 (+)
G682611 NA other downstream 3317452 19728833 ~ 19729671 (+)
G683669 NA other downstream 4151494 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 4215569 20626950 ~ 20632899 (+)

Expression


Co-expression Network