XLOC_025740 (si:ch211-191c10.1)


Basic Information

Item Value
gene id XLOC_025740
gene name si:ch211-191c10.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 52442102 ~ 52465596 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050605
CTCAAGTTTGATAAACATTTTCACCTACAATAGATAAAGTGAGGAGTGACTCTAATCTATTTGTATCGACACAGAATACATCTGGAGACGTGTCTGAAGAAAGACAACTTCTGGAAACCCACAACTACTTTTTTTGTATGGGAATGCTCTGGATCAAAACATAAGCTGTCTTCATTGTTTACTTTTTAATCCGCAAGTCTCCTTCACTCTGACCATGAGGCGCATGTATCTGCTGATTCTGGGTCTTCTGTTTGTACTGATAGAGGACATCATCATGCAGGACTGCTCGGttggctataaaaaaaaaaaaaggaaagtgtATGAAGATGACTGTGAGCAGGAACTCATTTGTGGGGAAAATGCAAACTGCTTCAACACTGTTGGCAGCTACTACTGTCAGTGTGACATAGGATTCATACCAGAGGGCACTAAACCAACTGTTAATTTCACACAAGCAGATGGGATTCAGTGCAAAGACtttaatgaatgtgtgaatacCAGCATTAATTGTGGTCCAAATGCAGAATGTGTCAATAATCAAGGAGGTTATGCCTGCATATGTAGAACTGGCTACACTCCCAGCAATGGAAAGGAAACATTTCTTGTTGGACAAGGAGTTCAGTGTGTTGGTAAGAGCACATTAGAGTTTAGTTATGTTTGGCAGTTTACTGTGTAACATTGCTTGCGATTTAGCACAATCATTTTCTCtttacattttgtattattatctATCTGTGATTTAAAGACAGAAATAAATGTAATGATCCCAGTTTTTGtg

Function

symbol description
si:ch211-191c10.1 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to be integral component of plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097993

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050605 True 778 mRNA 0.38 4 52442102 52465596

Neighbor

gene id symbol gene type direction distance location
XLOC_025739 NA coding upstream 49897 52390252 ~ 52392205 (+)
XLOC_025738 NA coding upstream 53063 52377578 ~ 52389039 (+)
XLOC_025737 BX511132.1 coding upstream 62630 52367302 ~ 52379472 (+)
XLOC_025736 BX511132.2 coding upstream 147594 52275691 ~ 52294508 (+)
XLOC_025735 NA coding upstream 177956 52224103 ~ 52264146 (+)
XLOC_025741 adgre5a coding downstream 2283 52467879 ~ 52471761 (+)
XLOC_025742 si:ch211-191c10.3 coding downstream 8074 52473670 ~ 52474770 (+)
XLOC_025743 si:ch211-241f5.3 coding downstream 9462 52475058 ~ 52496765 (+)
XLOC_025744 ptger1c coding downstream 63010 52528606 ~ 52539663 (+)
XLOC_025745 slc27a1a coding downstream 79418 52545014 ~ 52603683 (+)
XLOC_025429 BX649540.1 misc upstream 22193066 30248739 ~ 30249036 (+)
XLOC_025731 NA non-coding upstream 541203 51895324 ~ 51900899 (+)
XLOC_025746 BX511096.1 non-coding downstream 154462 52620058 ~ 52620175 (+)
XLOC_025750 NA non-coding downstream 340676 52806272 ~ 52883424 (+)
XLOC_025751 CT573476.2 non-coding downstream 363316 52828912 ~ 52829006 (+)
XLOC_025761 NA non-coding downstream 1061369 53526965 ~ 53652401 (+)
XLOC_025764 CU633748.1 non-coding downstream 1601927 54067523 ~ 54067639 (+)

Expression


Co-expression Network