XLOC_025741 (adgre5a)


Basic Information

Item Value
gene id XLOC_025741
gene name adgre5a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 52467879 ~ 52471761 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050606
CTCTTTTCAGACCTTGATGAATGTGTAAATGCCAGCAATAATTGTGGTCCAAATGCAGAATGTGCCAATAATCAAGGAGGTTATGTGTGCAGCTGTAGAACTGGCTACACTCCCAACAATGGAAAGAAGACATTTACTGCAGAACAAGGAGTTGAGTGTAATGagtTTAATTatgagatatttaaaaagaagatcACTGCATTTGAGGCTGCTAATCCAGAGCTGGCAGAACTTGTCTTCTTGATGAACAGCAGCTGTGAGGCactaaaacagaataaaattcaaaatggAGAAAAGCTTTTAGAGGAATTTCTCAGTGCTCTAGACGGTCTGCTTCAGAATAATGATCAGTTGGATAACAAGAAAGCCTCAGCGGTGTTTAGTATTGTGGAAAGCATGCTTAAACTGATAGGACTTATGCTGCCAAGCAGCCAAACCAAGAGGTCAACCACTAGATCTGGTAAAAAagcaaaccaaacaaaaacacttCAACAACAAATATCACACTTCATATGCTTCACAGAAACAATTTTTACACTCATAatgtgtttttcttcttctttttcctcttctttttcttcttcttatttcATTTTCAGATGTGGAGCTGTTGGTTA

Function

symbol description
adgre5a Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to be integral component of plasma membrane. Is expressed in several structures, including eye; heart; integument; liver; and pleuroperitoneal region.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000026313

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050606 True 617 mRNA 0.38 4 52467879 52471761

Neighbor

gene id symbol gene type direction distance location
XLOC_025740 si:ch211-191c10.1 coding upstream 2283 52442102 ~ 52465596 (+)
XLOC_025739 NA coding upstream 75674 52390252 ~ 52392205 (+)
XLOC_025738 NA coding upstream 78840 52377578 ~ 52389039 (+)
XLOC_025737 BX511132.1 coding upstream 88407 52367302 ~ 52379472 (+)
XLOC_025736 BX511132.2 coding upstream 173371 52275691 ~ 52294508 (+)
XLOC_025742 si:ch211-191c10.3 coding downstream 1909 52473670 ~ 52474770 (+)
XLOC_025743 si:ch211-241f5.3 coding downstream 3297 52475058 ~ 52496765 (+)
XLOC_025744 ptger1c coding downstream 56845 52528606 ~ 52539663 (+)
XLOC_025745 slc27a1a coding downstream 73253 52545014 ~ 52603683 (+)
XLOC_025746 BX511096.1 coding downstream 148297 52620058 ~ 52620175 (+)
XLOC_025429 BX649540.1 misc upstream 22218843 30248739 ~ 30249036 (+)
XLOC_025735 NA non-coding upstream 203733 52224103 ~ 52264146 (+)
XLOC_025731 NA non-coding upstream 566980 51895324 ~ 51900899 (+)
XLOC_025750 NA non-coding downstream 334511 52806272 ~ 52883424 (+)
XLOC_025751 CT573476.2 non-coding downstream 357151 52828912 ~ 52829006 (+)
XLOC_025761 NA non-coding downstream 1055204 53526965 ~ 53652401 (+)
XLOC_025764 CU633748.1 non-coding downstream 1595762 54067523 ~ 54067639 (+)

Expression


Co-expression Network