LOC110529517 (nt5d1)


Basic Information

Item Value
gene id LOC110529517
gene name nt5d1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 17756253 ~ 17835551 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611761.2
CACTGAAACGCAacgctgcaaggcaaacgcagcgttccattggaaattaaAGCACTTCTGGTGTCCAAAACGCAAAAATACAGTCGGTGTGTTCGAAGCGTACTCATCGGCTTTCGCCTGCAGTCGGTTGCTTCAGCCTAACCACGCAAACGAGCCCATTGATTGACAGTAGTGTGCAGGAGTGCACAGGGCAACATCCTTGTTTTCCAGCATTTTCGTTAAAATGACCGAATATTTTTCCCTTtcagattgtgatgtcattgGTTTTGATTTGGACCACACACTCTGTCGGTACCATTTGAAAGAGACCTCCAGGCTGATCTATGAGAGCTTTACCAGGTATCTGGTGGAGCATAAAGACTATGACAAGGACCTTCTCACACTGACCCCTGCTACCTGGGATTTCTGTTTCAAGGGCTTAGTGGTAGACCTTGAGGATGGAAACTTGGTTAAATTGGCGGAAGATGGAACTGTCTTACGAGCAACCCATGGGACCAATAACCTCAGAACAGAAGAGATCATTAAACATTACGGTCCAAAAAGGGAATGGAACCACTTTAATAGCCTCAATACCACATTTACGAGATCTACAAAGTACTATTTTTATGACAACTATTTCGATCTACCTGGGGCTCTTCTCTGTGGAAGAGTTGTGGATATGTTGCGCAAGCGTGGGAGTGAGGTGAATTCAGACTTTTGGAAAGACATGGTCGCTGCCATCGACCACAATTACAACACATCAGCATTCAAAGAGGATGCTGGGTGGTACTTTCCCAGTGTGAAGAGGGACCCTGGTCGTTACCTGCAGCCCTGCTCTGAGTCTGTCAAGACCTGGCTGAGGAGCATGAAGAGTGCCGGGAAGGTCCTCCTGCTCATCACCAGCTCCCACAGCGACTACTGCAGGCTCATCTGTGACCAAATCCTGGGGAAGGACTGGGAGGAGCTGTttgacatcatcatcaccaacgcCTTGAAGCCTGGGTTCTTCTCACTGGTGCCCCAACAGAGGCCCTTCAGGACCCTGGTGAATGATGTGGAGGAGAGCGAAGGGCTGCCATCCCTGGACAAGCCTGGCTGGTACTCTCAAGGCAACTGGCCCCACCTCCACCAGCTGCTCAAGACCATGACTGGCAATCCTGAGCCCAAGGTGGTGTACTTTGGGGATAGCATGCGGTCGGACATGTTCCCTGCTAGCATGTTTGGGAAGTGGGAGACTGTGATGATCGTGgaggaaatggagggagagggcgTCCCGAGGAGCGACGCAGCAGAGACCAACGAGGCCCAAGTGGAGCCTCAGGAGAAGAAGGGAAAGTTTGAGGACCAGGGCATGAAGGCGCCCTCTGCTCCATCCGAACAGTGGGGATCCTACTTTGTGGACACACACAAGACTCctggaggggatgaggagagcCAGAAACTCACCTGGTGCTGCCATAGCATCCACAAATACAGCACAATGGCCATCCCCAGTGTGGAGTCTATTGCAGATCTCCCTCTGGACTACAAGTTCCCCAGGTTCTCTCCCAACAAACCCTGCACCACCGGCTACTACCCCAGACCCCCAGATTCCCTGCTGAAGAAATGCCAGAGTCAGTCGTCTTAAAGAGTCCTTCTTCCCAGAGTCACCCCCCCTCAACCTCCTCAGCCTAATGGGGAGGAATGTGCCTCCATCTCACCTGTAGTTCCACACCTGAACCATGCCAATCATCCCTAGAGCACAGGAAATCACGCTCACATTGATAGAAACCATGGGAATGTAAAAGCACAGTATCGCTCTGTAAGTATCTTGGCTACATTTGAACGTTGTTCTGTACGTGGATTATTGTACGTGTGTGTGGAAAATGTGACTTGCCAATTGTGTAGGTATCTGTCAGCATACAGTGCTGATTTAAAGCACATTCATATTGTTTTATGTGAAGACCACTATTTTTTTTATGTAGATATATAGGTATTGGTGTTCCAGTTGAACCCCCTATACTGTAAGTGCATCATTCAATGTAAGTTAATAACTCTTTAGAGTAGTAACAAACCTTTCAAACCCCACAAATAATGTCCtacattttgtttttgtgtgtcctTACCTCAAATCTGATCTGAAATGCAACGTTGAACAGTCCCAGCAGTGTTTGTCTCCCGAGAGAAATTCAGAATAATCCATTATGCCTGGTATTAGTGTGTGTATAATACATAATAAACAGACATTTTGGTTTTGTTTCGATGTATGCATTTGAATAACAGTAAATTTAGATGCCCTTAAAAGGTAAAGCATTTCCCCTGTATTGATTTTGTGTAAGGTGTGTAAGAGCATTGTTCTTGAAGAAATGGCACAATCTGTCCTTGGTGTTACCTTTCTGTGGGGAAAAATGTAATAATAAAGGAAAACTGTAATACTGGGTGGTTAATACTATGCTCTGTGTACTCTATGTATTATCTTGGTGCAGCAGTAAACTATAGTGCTGTTGGGGTGACTGTAAAAGTGTGGAATACTTAGGCTTCATAATGCAGTACCAATTTGAATATATGCTTTAACCAACTCCTGAATGGTTACATGTGTTGGTGGACTGCATATAGACTAGTTGTATTATATTGATAAGAAACAAAGTCTGAATATGCTTTTAAGAGTATTTTGATAGTAAGTACTGTATTAGTTgataagagaggacaggagacttTAATTGGGAAGCCAAAGTGGGTTATTATTTATGTTATAAATGTGTGTGTTGGCGTTAAACACAATGCAGCTTTAGTGATCCATTTACTTTTTTCATGTGATTTGCAAACTTTTATAAGCCCATTTGCCTTATGTTCAATTCATTAGTGCTCTTGTGTTCTAGAGAAGATACAGGGAAAGTGTTTAATGTACTGtctattaaataaaaaaaaatgttctaCAATTTTGTTACACTGCC

Function

NR:

description
5'-nucleotidase domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611761.2 True 2912 mRNA 0.45 12 17756253 17835551

Neighbor

gene id symbol gene type direction distance location
LOC110529514 LOC106571323 coding downstream 212 17728290 ~ 17756041 (-)
LOC110529513 LOC106571326 coding downstream 32380 17720967 ~ 17723873 (-)
LOC110529512 LOC106571327 coding downstream 36058 17706609 ~ 17720195 (-)
LOC110529510 LOC106571329 coding downstream 257269 17422766 ~ 17498984 (-)
LOC110529509 LOC106571331 coding downstream 674674 17056115 ~ 17081579 (-)
LOC110529520 marcs coding upstream 233601 18069152 ~ 18072594 (-)
LOC110529526 LOC106571316 coding upstream 746612 18582163 ~ 18587994 (-)
LOC110529198 LOC106571314 coding upstream 753267 18588818 ~ 18674196 (-)
LOC110529527 LOC106571313 coding upstream 841057 18676608 ~ 18687665 (-)
LOC110529528 LOC106571312 coding upstream 854900 18690451 ~ 18714820 (-)
G680592 NA non-coding downstream 10725 17745325 ~ 17745528 (-)
G680586 NA non-coding downstream 24458 17731583 ~ 17731795 (-)
G680582 NA non-coding downstream 38702 17712733 ~ 17717551 (-)
G680581 NA non-coding downstream 40539 17710544 ~ 17715714 (-)
G680572 NA non-coding downstream 53008 17703015 ~ 17703245 (-)
G680654 LOC106567469 non-coding upstream 289 17835840 ~ 17836420 (-)
G680859 NA non-coding upstream 310797 18146348 ~ 18146565 (-)
G680882 NA non-coding upstream 331698 18167249 ~ 18167464 (-)
G680884 NA non-coding upstream 333198 18168749 ~ 18169039 (-)
G680892 NA non-coding upstream 342952 18178503 ~ 18178731 (-)
G679471 NA other downstream 641725 17113543 ~ 17114528 (-)
G679210 LOC106571290 other downstream 1125994 16625090 ~ 16630259 (-)
G679087 NA other downstream 1323239 16432621 ~ 16433014 (-)
G676635 LOC106571254 other downstream 3239725 14508329 ~ 14516528 (-)
G676178 NA other downstream 3467908 14287849 ~ 14288345 (-)
G681659 NA other upstream 955679 18791230 ~ 18792137 (-)
G684844 NA other upstream 3643215 21478766 ~ 21479203 (-)
LOC110529207 sprtn other upstream 4084876 21920427 ~ 21926307 (-)
G685953 NA other upstream 4323479 22159030 ~ 22161042 (-)
LOC110529643 LOC106571435 other upstream 5781356 23614938 ~ 23659111 (-)

Expression


Co-expression Network