XLOC_025742 (si:ch211-191c10.3)


Basic Information

Item Value
gene id XLOC_025742
gene name si:ch211-191c10.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 52473670 ~ 52474770 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050607
GACACCAATGAATGTGTGAATACCAGCATTAATTGTGGGGGAAATGCAGAATGTGTCAATAGTCAAGGAGGTTATGCCTGCAAATGTAAATCTGGCTACGTTTCCAGCAGTGGAAAGGAGACATTTACTGTAGGACAAGGAGTTCAGTGTGTTGagtTTAATTatgagatatttaaaaagaagatcACTGCATTTGAGGCTGCTAATCCAGAGCTGGCAGAACTTGTCTTCTTGATGAACAGCAGCTGTGAGGCactaaaacagaataaaattcaaaatggAGAAAAGCTTTTAGAGGAATTTCTCAGTGCTCTAGACGGTCTGCTTCAGAATAATGATCAGTTGGATAACAA

Function

symbol description
si:ch211-191c10.3 Predicted to enable calcium ion binding activity.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097138

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050607 True 353 mRNA 0.39 4 52473670 52474770

Neighbor

gene id symbol gene type direction distance location
XLOC_025741 adgre5a coding upstream 1909 52467879 ~ 52471761 (+)
XLOC_025740 si:ch211-191c10.1 coding upstream 8074 52442102 ~ 52465596 (+)
XLOC_025739 NA coding upstream 81465 52390252 ~ 52392205 (+)
XLOC_025738 NA coding upstream 84631 52377578 ~ 52389039 (+)
XLOC_025737 BX511132.1 coding upstream 94198 52367302 ~ 52379472 (+)
XLOC_025743 si:ch211-241f5.3 coding downstream 288 52475058 ~ 52496765 (+)
XLOC_025744 ptger1c coding downstream 53836 52528606 ~ 52539663 (+)
XLOC_025745 slc27a1a coding downstream 70244 52545014 ~ 52603683 (+)
XLOC_025746 BX511096.1 coding downstream 145288 52620058 ~ 52620175 (+)
XLOC_025747 pgls coding downstream 209786 52684556 ~ 52700610 (+)
XLOC_025429 BX649540.1 misc upstream 22224634 30248739 ~ 30249036 (+)
XLOC_025735 NA non-coding upstream 209524 52224103 ~ 52264146 (+)
XLOC_025731 NA non-coding upstream 572771 51895324 ~ 51900899 (+)
XLOC_025750 NA non-coding downstream 331502 52806272 ~ 52883424 (+)
XLOC_025751 CT573476.2 non-coding downstream 354142 52828912 ~ 52829006 (+)
XLOC_025761 NA non-coding downstream 1052195 53526965 ~ 53652401 (+)
XLOC_025764 CU633748.1 non-coding downstream 1592753 54067523 ~ 54067639 (+)

Expression


Co-expression Network