LOC118965607


Basic Information

Item Value
gene id LOC118965607
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 18457768 ~ 18459295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053018.1
CCAGGGAatacacagctctgacacagatAGGTGTGTAAAGTTGAGTGGGGCTCAGGTTTAACTGTTAAACGTGACTGTAAATGGCACACTTTTCTGTAAGTTTGAACTTATTTTCATTGTTTGAAGTCGGGAGAATTTAGTACAAGACTTGTTTTTTTATTACTCATTCACAGACACCATGCAGGAAGGTTTACAGTAGTTGCTTGAAAGAATGAAAAAGTTCACTTTCTAGGAGCATCAGTTTGACTGGTTATAATCGTATGTATTATAGTGACTCTTTATCACCAAAGGACTGCTTTGAGTTCTGTATAGCGAAATGAATATCCCTCCTGAGAGAAGAATGGACTCTATCAAGATTCCTGTTGTCACAGAAGCATTCCTTTGGAGACAGATGAGTCTATGACATTATCAACCCTGGACCTACTGTGACCTGTGGGCCAAAGGAAGAGGGCTGGTTCACCCCTGAGGTGACTGTCAATGATGTAGGCCAGGTGGACGACCCCAAGGACCCCTGGAGAAGCCCAGTGGAGGACCCTCAGGGTCAGCCTCCACCCCCGCCCAGAGCCCCTTCCCTGCCTGAGCCACATCAGCAAGACATGTCCCCCCACACCCCTGATCGCCTGATGAAAGGCCCCTACCCTGACAATCTCAGGTTACACCCCTACAGAGAAAAGGCTCAGTGAACTGAGGATGAGGACTTCTCTTTATCTGGACTTCTCCAGTGGGAAGTGGTGGGCTTCGCTGGTCCTCCTAGCTGGCCACTACCTTGGGACTGTTGTCTTGAAAGGAGCAGAACACGTAGAAGCCCGTCTTCCTCTCACGTCTGACTTAAACAACATCCACTACTGTGTCCCTCCAAGTCACCAAGCACACATGCCTCCTCAGTGTAAGTAACatgatgtactgtatatgactacagtattcaTAGAATGAGACAGAACagatatacagtcgtggccaaaagttttgagaatgacacaaatattaattttcacaaagtctgctgcctcagtttatatgatgg

Function

NR:

description
PREDICTED: adapter protein CIKS-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053018.1 True 1024 mRNA 0.46 3 18457768 18459295

Neighbor

gene id symbol gene type direction distance location
LOC110529195 LOC106571338 coding upstream 1555 18454978 ~ 18456213 (+)
LOC110529523 LOC106571317 coding upstream 8284 18362788 ~ 18449484 (+)
LOC110529194 NA coding upstream 115660 18331547 ~ 18342108 (+)
LOC118965599 LOC106571319 coding upstream 140168 18310907 ~ 18317600 (+)
LOC110529521 LOC106571319 coding upstream 146704 18274367 ~ 18311064 (+)
LOC110529525 NA coding downstream 2335 18461630 ~ 18464743 (+)
LOC110529197 LOC106571315 coding downstream 10085 18469380 ~ 18582050 (+)
LOC110529529 cdk19 coding downstream 256764 18716059 ~ 18786106 (+)
trnaa-ugc-23 NA coding downstream 277715 18737010 ~ 18737083 (+)
LOC110529530 LOC106571309 coding downstream 347222 18806517 ~ 18876551 (+)
G681084 NA non-coding upstream 110417 18338445 ~ 18347351 (+)
G680957 NA non-coding upstream 138419 18319047 ~ 18319349 (+)
G680956 NA non-coding upstream 138825 18318163 ~ 18318943 (+)
G680959 NA non-coding upstream 147816 18309150 ~ 18309952 (+)
G681167 NA non-coding downstream 14474 18473769 ~ 18473996 (+)
G681171 NA non-coding downstream 17991 18477286 ~ 18478291 (+)
G681174 NA non-coding downstream 22190 18481485 ~ 18481710 (+)
G681175 NA non-coding downstream 23303 18482598 ~ 18483066 (+)
G681177 NA non-coding downstream 34933 18494228 ~ 18494436 (+)
LOC110529505 LOC106571335 other upstream 1562933 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 2069432 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 2071823 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 3197778 15258311 ~ 15260331 (+)
G676919 NA other upstream 3350625 15105603 ~ 15107143 (+)
G681909 NA other downstream 704641 19163936 ~ 19165640 (+)
G682611 NA other downstream 1269538 19728833 ~ 19729671 (+)
G683669 NA other downstream 2103580 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 2167655 20626950 ~ 20632899 (+)
G683845 NA other downstream 2247763 20707058 ~ 20707371 (+)

Expression


Co-expression Network