LOC101268947 (il20r1b)


Basic Information

Item Value
gene id LOC101268947
gene name il20r1b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 19932433 ~ 19937792 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984975.1
TTAACAGACGCGTGTTCACTAAATTCCTCCTTGCTTACTGTAAATAACTCCGCCCATTTCACGTGAGTATTGACTCCTACGCTACCTGACCAAGTTGTCTCACATGGGTCCAGTGTAGGATGTCCTGAAGGAGTTCATTTTAACTCTGTGAACCTGAGGAACATTGCAAAGTGGCATCCTGGGAAAGACACACCAAATGACACACATTACACAGTGGAGTATGCAATTTATGGTGACAGAATGGATAGTGGGGCGACACAGGTGCGCTGGAGGGTGAAGAACCAGTGCAGAGACATCCCTCAGACCCAGTGTGATCTATCCAATGAGACCACTGACCTGGATGAAGGCTACTTTGCCAGAGTCAAGGCTGTGGGCACAAACCTATCCTCCAAATGGGCATTCACGGAAAAGAGGTTTGACCCCAAAGCTGACACAACCTTTGGACCTCCACTTGTAAAACTTGTGCTGAAGGAGAATAGTGTTACTGTCAAGCTGAAGGGTCCAATGAGATGGAAGACTGGAAACATGACAAAAGAGTACTCCTTGTTGAAAATATACCCTCAGATGACATACAACCTCTCTGTGTACGACAACAGAAGCAACAAAACGCATCACTTCACTGTGGAAAACAGATCCTTTGAATATGGGTTGCTTTCCTATGAAACCCAGTATTGTTTCTCTGCTAATTCCCAGGTCCTGTCACTTCCTATACCTTGGCATGCCTCTGAATGGCAGTGCCTAACAACCCCAAAGGATCCCTTCTACGATCAGCTGCTACTGATGCTGATGGGAGCCATTGTACCATCAGTTATCTGCCTTTTCATGCTGATCCTGGCCGGATGCCTTTTCTACTACTTTGTCTGTGGTAATAAACAGAAAAGTCCCCCTTTCCTGGAAATATTGGACGTTCAGAACCCACCGCAGACTTTCTGTCCTGAGCATACTGTGACAGTGAATGTGGTACTGGTCAACATTGCCAAGCCCATGGAGTTGATAGCCATAAAGCCTAACAACATCCCTACCCTGATCCACCAAACAGAGTGGGAGCTCGAACTACCCTACACTTCCCAGCAAGCCCCTGGCATAGAACCTCCAAAGGAGGGATCATGCGAAGATGAATTCGATGAGGCCCAACCAGAGCATCTAGACTACGGCTTCGTTGGAGCGGCCCCAGCGATGCCGGAAGTAAGAGAAAGTGAGGCATCTGACATTGAGAAAACCCGGCCCCTGCGTCTCAGCCAGGTCAACCCGTACATAGCACAGAGATGTGCACCAGGTTCACAGGAGCCTGTAGAGAATGTTTTGACTGGGATGTGTTTAGACATGGACCCCAAGACAGGGCTCTTTAGAATGCCACTGCTGTCTGATATAAAGCTGGGGGTGGAGAGCACAAGTTACAAAGAGCCTGATCAAATGGGTCCCTACGCACCACAGCACGTCTCTGTCAGAGAGACCACTGAGGGGGACCTGTGGGGAGACAAAGCTGAAGAGCCCCAAAGTTACCCCTCAGACTACGGCTTCGTGGGAGCAGCCCCAAAGCAGCAGATGGTGCCAACAAAGTACCAGACGCGGTCTAACAGGAGGGATAATCAGCCCCTGCTGCTAGCCCAGGTCAACCTGTACAGAAGCCAGAGGCAAGCTCTGTTTCCACAggagtctgaggaagaggatggaTTAGGTGGTGGTAACTGTGTTGACTGGAGCCCTACAACAGGGATCCTCCAGATGCCTTTGCTCTCCAAGCCTATTCCAGAAGTGGAGGGAGCAAGGAAGGACAGGGAGTCAGAGCAGTTGGAGATCTTACCCAGTGTGTTAGTGAGACAATCCTCAGaggagagtgagggtgagagtgACCTGACTAAACTACAGAATGTCTGGAGTCTACAGATCAACATGGAGGACTAACCtatcagacagttaacctattGGACACTTAACCtatcagacagttaacctattGGACACACATTATTACAGCAAAAAAGTTTGTTTACCGTATGTGGAAGAATAATTCAGATTGCTGTTTGTACCATTTGATTCAGTTGCCAAATCAAATGAAGGACATCTTTTTAACTAATCCAAAATGCTTTGTAAATGCTTCAGCAATGTGATTGCAACTAATTTATTTTTGAGGTTTTGTTTACTTTGTACCTTTTATCCATACTTTTCTACTAACTTATCACGATTGATGTATTGCCAgatagcttttttttttacaattgaaTTCAAAATTTATATGAAGGCACATGCAATGCCACTTTACCTCATGATGATTAACAAGCAGGGGGAGTGTTGCCGTAAAGGTTTATAACCACACACTAAACTATGAAGACAATGCAAATAaaggatatatacagtacctgtca
>XM_021611838.2
TAAAGCAAATAGCAACATAAAAGACACTGAAGGAGATCCTCGAACGGAATAATTTACTGTAGCCGATTGGTTGAAATGTCCATGAGCTTAAGAGTATATATTTGTTTTACCAATACTACGGGAAAGAATGATCAAATATCTCTTGATTATTTATCTATGGACGCCAGTTGTCTCACATGGGTCCAGTGTAGGATGTCCTGAAGGAGTTCATTTTAACTCTGTGAACCTGAGGAACATTGCAAAGTGGCATCCTGGGAAAGACACACCAAATGACACACATTACACAGTGGAGTATGCAATTTATGGTGACAGAATGGATAGTGGGGCGACACAGGTGCGCTGGAGGGTGAAGAACCAGTGCAGAGACATCCCTCAGACCCAGTGTGATCTATCCAATGAGACCACTGACCTGGATGAAGGCTACTTTGCCAGAGTCAAGGCTGTGGGCACAAACCTATCCTCCAAATGGGCATTCACGGAAAAGAGGTTTGACCCCAAAGCTGACACAACCTTTGGACCTCCACTTGTAAAACTTGTGCTGAAGGAGAATAGTGTTACTGTCAAGCTGAAGGGTCCAATGAGATGGAAGACTGGAAACATGACAAAAGAGTACTCCTTGTTGAAAATATACCCTCAGATGACATACAACCTCTCTGTGTACGACAACAGAAGCAACAAAACGCATCACTTCACTGTGGAAAACAGATCCTTTGAATATGGGTTGCTTTCCTATGAAACCCAGTATTGTTTCTCTGCTAATTCCCAGGTCCTGTCACTTCCTATACCTTGGCATGCCTCTGAATGGCAGTGCCTAACAACCCCAAAGGATCCCTTCTACGATCAGCTGCTACTGATGCTGATGGGAGCCATTGTACCATCAGTTATCTGCCTTTTCATGCTGATCCTGGCCGGATGCCTTTTCTACTACTTTGTCTGTGGTAATAAACAGAAAAGTCCCCCTTTCCTGGAAATATTGGACGTTCAGAACCCACCGCAGACTTTCTGTCCTGAGCATACTGTGACAGTGAATGTGGTACTGGTCAACATTGCCAAGCCCATGGAGTTGATAGCCATAAAGCCTAACAACATCCCTACCCTGATCCACCAAACAGAGTGGGAGCTCGAACTACCCTACACTTCCCAGCAAGCCCCTGGCATAGAACCTCCAAAGGAGGGATCATGCGAAGATGAATTCGATGAGGCCCAACCAGAGCATCTAGACTACGGCTTCGTTGGAGCGGCCCCAGCGATGCCGGAAGTAAGAGAAAGTGAGGCATCTGACATTGAGAAAACCCGGCCCCTGCGTCTCAGCCAGGTCAACCCGTACATAGCACAGAGATGTGCACCAGGTTCACAGGAGCCTGTAGAGAATGTTTTGACTGGGATGTGTTTAGACATGGACCCCAAGACAGGGCTCTTTAGAATGCCACTGCTGTCTGATATAAAGCTGGGGGTGGAGAGCACAAGTTACAAAGAGCCTGATCAAATGGGTCCCTACGCACCACAGCACGTCTCTGTCAGAGAGACCACTGAGGGGGACCTGTGGGGAGACAAAGCTGAAGAGCCCCAAAGTTACCCCTCAGACTACGGCTTCGTGGGAGCAGCCCCAAAGCAGCAGATGGTGCCAACAAAGTACCAGACGCGGTCTAACAGGAGGGATAATCAGCCCCTGCTGCTAGCCCAGGTCAACCTGTACAGAAGCCAGAGGCAAGCTCTGTTTCCACAggagtctgaggaagaggatggaTTAGGTGGTGGTAACTGTGTTGACTGGAGCCCTACAACAGGGATCCTCCAGATGCCTTTGCTCTCCAAGCCTATTCCAGAAGTGGAGGGAGCAAGGAAGGACAGGGAGTCAGAGCAGTTGGAGATCTTACCCAGTGTGTTAGTGAGACAATCCTCAGaggagagtgagggtgagagtgACCTGACTAAACTACAGAATGTCTGGAGTCTACAGATCAACATGGAGGACTAACCtatcagacagttaacctattGGACACTTAACCtatcagacagttaacctattGGACACACATTATTACAGCAAAAAAGTTTGTTTACCGTATGTGGAAGAATAATTCAGATTGCTGTTTGTACCATTTGATTCAGTTGCCAAATCAAATGAAGGACATCTTTTTAACTAATCCAAAATGCTTTGTAAATGCTTCAGCAATGTGATTGCAACTAATTTATTTTTGAGGTTTTGTTTACTTTGTACCTTTTATCCATACTTTTCTACTAACTTATCACGATTGATGTATTGCCAgatagcttttttttttacaattgaaTTCAAAATTTATATGAAGGCACATGCAATGCCACTTTACCTCATGATGATTAACAAGCAGGGGGAGTGTTGCCGTAAAGGTTTATAACCACACACTAAACTATGAAGACAATGCAAATAaaggatatatacagtacctgtca
>XM_021611839.2
TAAAGCAAATAGCAACATAAAAGACACTGAAGGAGATCCTCGAACGGAATAATTTACTGTAGCCGATTGGTTGAAATGTCCATGAGCTTAAGAGTATATATTTGTTTTACCAATACTACGGGAAAGAATGATCAAATATCTCTTGATTATTTATCTATGGACGCCAGTTGTCTCACATGGGTCCAGTGTAGGATGTCCTGAAGGAGTTCATTTTAACTCTGTGAACCTGAGGAACATTGCAAAGTGGCATCCTGGGAAAGACACACCAAATGACACACATTACACAGTGGAGTATGCAATTTATGGTGACAGAATGGATAGTGGGGCGACACAGGTGCGCTGGAGGGTGAAGAACCAGTGCAGAGACATCCCTCAGACCCAGTGTGATCTATCCAATGAGACCACTGACCTGGATGAAGGCTACTTTGCCAGAGTCAAGGCTGTGGGCACAAACCTATCCTCCAAATGGGCATTCACGGAAAAGAGGTTTGACCCCAAAGCTGACACAACCTTTGGACCTCCACTTGTAAAACTTGTGCTGAAGGAGAATAGTGTTACTGTCAAGCTGAAGGGTCCAATGAGATGGAAGACTGGAAACATGACAAAAGAGTACTCCTTGTTGAAAATATACCCTCAGATGACATACAACCTCTCTGTGTACGACAACAGAAGCAACAAAACGGTCCTGTCACTTCCTATACCTTGGCATGCCTCTGAATGGCAGTGCCTAACAACCCCAAAGGATCCCTTCTACGATCAGCTGCTACTGATGCTGATGGGAGCCATTGTACCATCAGTTATCTGCCTTTTCATGCTGATCCTGGCCGGATGCCTTTTCTACTACTTTGTCTGTGGTAATAAACAGAAAAGTCCCCCTTTCCTGGAAATATTGGACGTTCAGAACCCACCGCAGACTTTCTGTCCTGAGCATACTGTGACAGTGAATGTGGTACTGGTCAACATTGCCAAGCCCATGGAGTTGATAGCCATAAAGCCTAACAACATCCCTACCCTGATCCACCAAACAGAGTGGGAGCTCGAACTACCCTACACTTCCCAGCAAGCCCCTGGCATAGAACCTCCAAAGGAGGGATCATGCGAAGATGAATTCGATGAGGCCCAACCAGAGCATCTAGACTACGGCTTCGTTGGAGCGGCCCCAGCGATGCCGGAAGTAAGAGAAAGTGAGGCATCTGACATTGAGAAAACCCGGCCCCTGCGTCTCAGCCAGGTCAACCCGTACATAGCACAGAGATGTGCACCAGGTTCACAGGAGCCTGTAGAGAATGTTTTGACTGGGATGTGTTTAGACATGGACCCCAAGACAGGGCTCTTTAGAATGCCACTGCTGTCTGATATAAAGCTGGGGGTGGAGAGCACAAGTTACAAAGAGCCTGATCAAATGGGTCCCTACGCACCACAGCACGTCTCTGTCAGAGAGACCACTGAGGGGGACCTGTGGGGAGACAAAGCTGAAGAGCCCCAAAGTTACCCCTCAGACTACGGCTTCGTGGGAGCAGCCCCAAAGCAGCAGATGGTGCCAACAAAGTACCAGACGCGGTCTAACAGGAGGGATAATCAGCCCCTGCTGCTAGCCCAGGTCAACCTGTACAGAAGCCAGAGGCAAGCTCTGTTTCCACAggagtctgaggaagaggatggaTTAGGTGGTGGTAACTGTGTTGACTGGAGCCCTACAACAGGGATCCTCCAGATGCCTTTGCTCTCCAAGCCTATTCCAGAAGTGGAGGGAGCAAGGAAGGACAGGGAGTCAGAGCAGTTGGAGATCTTACCCAGTGTGTTAGTGAGACAATCCTCAGaggagagtgagggtgagagtgACCTGACTAAACTACAGAATGTCTGGAGTCTACAGATCAACATGGAGGACTAACCtatcagacagttaacctattGGACACTTAACCtatcagacagttaacctattGGACACACATTATTACAGCAAAAAAGTTTGTTTACCGTATGTGGAAGAATAATTCAGATTGCTGTTTGTACCATTTGATTCAGTTGCCAAATCAAATGAAGGACATCTTTTTAACTAATCCAAAATGCTTTGTAAATGCTTCAGCAATGTGATTGCAACTAATTTATTTTTGAGGTTTTGTTTACTTTGTACCTTTTATCCATACTTTTCTACTAACTTATCACGATTGATGTATTGCCAgatagcttttttttttacaattgaaTTCAAAATTTATATGAAGGCACATGCAATGCCACTTTACCTCATGATGATTAACAAGCAGGGGGAGTGTTGCCGTAAAGGTTTATAACCACACACTAAACTATGAAGACAATGCAAATAaaggatatatacagtacctgtca

Function

NR:

description
interleukin-20 receptor subunit alpha isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984975.1 False 2366 mRNA 0.46 7 19932433 19937792
XM_021611838.2 False 2439 mRNA 0.46 7 19932533 19937792
XM_021611839.2 True 2355 mRNA 0.46 7 19932533 19937792

Neighbor

gene id symbol gene type direction distance location
LOC118965499 NA coding upstream 2186 19927752 ~ 19930247 (+)
LOC118965655 NA coding upstream 56445 19875933 ~ 19875988 (+)
akap7 LOC106571361 coding upstream 70407 19832891 ~ 19863963 (+)
LOC110529553 LOC106571358 coding upstream 259696 19664037 ~ 19672737 (+)
LOC110529552 LOC106571356 coding upstream 300362 19592584 ~ 19632071 (+)
LOC110529562 NA coding downstream 113748 20051540 ~ 20060435 (+)
LOC110529565 NA coding downstream 356847 20294639 ~ 20379353 (+)
LOC110529573 serc1 coding downstream 533365 20471157 ~ 20477447 (+)
LOC110529577 LOC106571536 coding downstream 697613 20635405 ~ 20637793 (+)
LOC110529580 tbc1d32 coding downstream 717367 20652867 ~ 20682999 (+)
G682605 NA non-coding upstream 64230 19867100 ~ 19868203 (+)
G682425 NA non-coding upstream 283938 19648203 ~ 19648495 (+)
G682424 NA non-coding upstream 284392 19647753 ~ 19648041 (+)
G682359 NA non-coding upstream 294061 19637014 ~ 19638372 (+)
G682735 NA non-coding downstream 173 19937965 ~ 19939193 (+)
G682734 NA non-coding downstream 1801 19939593 ~ 19940086 (+)
G682923 NA non-coding downstream 12755 19950547 ~ 19950908 (+)
G682925 NA non-coding downstream 14414 19952206 ~ 19952430 (+)
G682941 NA non-coding downstream 29989 19967781 ~ 19968082 (+)
G682611 NA other upstream 202762 19728833 ~ 19729671 (+)
G681909 NA other upstream 766793 19163936 ~ 19165640 (+)
LOC110529505 LOC106571335 other upstream 3037598 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 3544097 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 3546488 16384802 ~ 16385945 (+)
G683669 NA other downstream 625083 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 689158 20626950 ~ 20632899 (+)
G683845 NA other downstream 769266 20707058 ~ 20707371 (+)
G684314 NA other downstream 1139278 21077070 ~ 21078871 (+)
LOC110529590 LOC106571388 other downstream 1481556 21406192 ~ 21424564 (+)

Expression


Co-expression Network