mcm9 (LOC106571380)


Basic Information

Item Value
gene id mcm9
gene name LOC106571380
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21117379 ~ 21136825 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611923.2
TAGGGGGTTCCTTCCATAAAAGCCTTTTCACATTTTGTGAAAGACACCCACGTGTTTTCCATTCTAttattgttgattttttttttaattcgtTGTATTTAATTCATGGTGACTATTTTAAGACATTGCTATGATGTTTATTTAATATTATAGTTTGAACACCCCCTGTGGAAGTAGTGTATGAATCCAGCGGGAAGTACCAAAGTGCTTAGTGTGTCCGTGGGACTTGTGTTGATATCGCTAGCTGTAGAGAAACCCTAACACTCAATAAAATAGGATCCAGGATGTTGATAAGCCCAGAGCAGGTAGCTCTGATAGGGCAGGTGTTTGAGGCGTATGTGACAGAGCACCACAGGAGTGACATCCTGCAGATCCTTCAGGAGCCTGATGAGGATGCCCACTACCCGGTGGTTATCAACGCCATGACACTGTTTGAAGCCAACATGGAGGTGGGCGACTACTTCAACGCCTACCCCAGCGAAGTCATCAACATCCTTGACAACACCCTTCACCGAGCTGCTAAGACAGTGTTAGAGAACTCTACACAGCAAAGGTGGCACAAGGTCAAACACCACCTGCATGCCCGAATCACAGgtcttcctgtgtgtcctgagcTCACCAGGGAGAACATCCCCAAGTCTCGGGACGCTGGTCACTTCCTGTCCGTCACGGGCACGGTCATCCGCACCAGTGTGGCCAAGGTTCTGGAGTACGAGAGGGACTACATGTGCTCTAAGTGCCGTCACGTGTTCTCCCTGCAGGCTGACTTTGAGCAGTACTATAGCTTCGTTCCCCCTACCAGCTGCCCCAACCAGGACCTCTGTAACTCCAACAAGTTCACCTGCCTGTCAGCCAGCTCCACCCCGGCAGCATGCAGGGACTACCAGGAAATTAAGATCCAGGAGCAGGCCCAGAGGTTGTCTGTGGGCAGTATTCCTCGCTCCATGGTGGTCATTTTGGAGGATGATCTGGTAGACAGCTGTAAATCAGGTGATGATGTTACAGTGTATGGAGTAGTTCGTCAGCGATGGAAGCCCCTGTACGAGGACGCACGCTGTGAATTGGATCTGGTGTTGAAAGCCAATTTCATTGAAGTGAACAATGAGCAGACCATGGCAGCTCTGGTCCTAGAGGACATGCAGCAGGAGTTTGAGGAGTTCTGGGACAATTACAAACATGACCCTATAACTGGCAGGAACCAGATTCTCATGAGCCTGTGCCCACAAGTGTTTGGAATGTATGTAGTTAAGTTAGCTGTTGCCATGGTGTTAGCAGGTGGGGTGCAAAGAATAGATCCTTCTGGAACGAAAGTAAGAGGCGAGTCTCATCTTCTGCTGGTGGGAGACCCAGGCACAGGGAAGTCTCAGTTTCTGAAGTACGCTGCTAAGATCACTCCCCGGTCAGTCCTCACTGCTGGGATCGGCTCCACTACCGCAGGGTTGACGGTGGCAGCAGTGAAGGACTCCGGGGAGTGGCATCTAGAGGCAGGAGCACTGGTGCTGTCTGACGGAGGCCTGTGTTGTATCGACGAGTTCAACAGCATCAAAGAGCACGACCGCACCAGCATCCACGAAGCCATGGAGCAGCAAACCATCAGTGTGGCCAAGGCAGGCATGGTGTGTAAACTGAACACCAGGACCACCATCTTGGCTGCCACCAACCCTAAGGGCCAGTACGACCCAAACGTGCCTGTGTCGGTCAACGTGGCCCTGGCCAGCCCCCTGCTCAGCCGCTTTGACCTGGTCCTGGTCCTACTGGACACCAAGAACCCTGAGTGGGACCGCATCATCTCCTCCTTCATACTGCACAACAAAGGAGCTCCCTGCCAGTCGGAGGATTCTTTGTGGAGCATGGAGAAGATGAAGGCCTACTTCTGCCTGATCAAGGGGCTGCAGCCGCATGTGTCTGAGGAGGCCAACTCCATCCTGTCCCGCTACTACCAGCTGCAGAGGCAGAGCGACAGCAGGAACGCAGCCCGCACCACTATCCGCATGCTGGAGAGCCTCAGCCGCCTTGCTGAGGCACACGCCAGGTTGATGTTTCGAGACACTGTCACTGTGGAggatgctgttgttgttgtctctgtcatgGAGTGCTCTATGCAGggGGGCGCTCTCCTGGGAGATGTGAATGCTCTTCACACGTCATTCCCTGACAACCCCAGTCAGCAGTACCAGACACAGTGTCAAATTGTTCTTGAGGGCCTCCAGATGCCTCACCTCCTCTACAAGGAGATGGACAGGCTCTCAAGACTGCAGAATAATGGGCCAGGCTCCCCTAAAGGAACAGAAAAAGGTTCTCCTCTGCCTGCAAAGCAGCACAGTGATCTGAGAAGCAGTTATCATCACAAGAGTTCTCCATTCCAGACAAGCGGTCCAGGGCACTCTGACATCCCCACAGACTCAGAGAGTGGACTGGACTGGTTCCACTCACTGGCTGGCCCAGTGGGGGGAGGACATGCCAACTCGCCGATCATCACTTCACCCATcacaacatccacacaacacaaccacaactccTTCTCAAAGCAGGCCCGAACCCTGCCAAAACACCCCGCTGTGTCGTTGCTGGGCAACAGCGGTGCTGCACACAAGGAGAGTGGGAGAGCGCCTGTGTGCGATAAGACACCCAGTATAactgcggaggaggaggaggtggtagagagcTGTAAGGAGAGCAGTAAAAGCACAGCGTCAGCAGCAGCAGAAGACGGATCCTGTTCTGTTGTACAGAAGGTGTCCAAGAAATTGCGAGACAAACGGCTCAGAGCGATGACTCATGTTCCCCTTCAGGGAGACAAAGCTGTGGGAGGAGGCAACATCAGCACCAGCAGAGACCTCATAGACCATCTAGATGTGGAGCAGGCCTTCTCCACAGACTCACTGCCCTCCCACAGCACACCTGTAGCAGGGAAGAAACGCAACTCAAAAAAGAACAATGTCCCTTGTAACCTCCCGTCTGGAGACCAGGAGCTCTCTGGTACTGTGGGGGCAGGGGGAGAAGAACTGCACTCTAAGTTCACAGGGTTCACATTTAAACACAGAGAGAAGATGACCCACACGGAACCGCTCTGTCCAGATACTGACAGCTCAGACTTTCACACAGAGAATAGAGGTCCACCTAGCAAAGCAAAGACGCATAACAGAGAGAACCATAACACAGTTTCTtcagctagagagaaagagaaaacagaAAAGAAAAAGAGTGAGAAACAGTGTTACAAAGACAAGCCAGCAGATGGCAGCAGTTCTGCCCTGAGGCTGAGGGTTCAGTCTAAGGAGAAAGAGTTTCCCATTGAGGTGTCACGTGACCTGAACCCAGAGGTCAGTGGTCCCACGGCAGAGGGAGGTGATCGTGGGGATCATGGGACAGAGCAGAAACGCCAGCAGTTGCTGAGCAGAATTGCTCCAGGTGAGAACAGAACTACATTCACAACCTCCACAGACCTTCCACCACTACAGCCAGACCACCCAAAGCCCACTGTGGTGGCCTCTACCCTGGCCAaactctccaggttctccttcaCAACTACAAAGGACAAGGAAGTTACAAACCTAATAACAACTCTTACATCAGGTGCTCAGGTTACCTCGTCCATAGAGCTTAAAGCAGGGCAGCAGGACACATGGACACAAGCTATCACCAGCATACAGCAGAGGACAGGGGTGCAAGCTAAAGCCTCTACAGAGGATAGGACTGAGGCAAGAGTTAGTGGAGACAAAGACTTCCAGACATTTAACAGTAAGGGCCAAAACCCTGCTATAGATTCTGCTGTCAACCCTAAAAAGAGAAAGTGTTTTGAGCTGGGCTCTAAAGGCCTCTTCTCTGGCCTGTCCATGTTCAGCACCTCCAACTTTGATGAAGATGATCTGAGTGTAGACTGGGATGAGGAGTCGGGGAAAAAAACTAAAATGTAACAGTGAAATGATGTTTGAAATGATGTAATGTACTGAATATTATTTGTGACTTCTcaccgtgtgtgtgca

Function

NR:

description
DNA helicase MCM9-like

GO: NA

KEGG:

id description
K10738 MCM9; DNA helicase MCM9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611923.2 True 3986 mRNA 0.52 13 21117379 21136825

Neighbor

gene id symbol gene type direction distance location
LOC110529583 LOC106571378 coding upstream 1082 21010321 ~ 21116297 (+)
LOC110529582 LOC106571376 coding upstream 125021 20825514 ~ 20992358 (+)
LOC110529580 tbc1d32 coding upstream 434380 20652867 ~ 20682999 (+)
LOC110529577 LOC106571536 coding upstream 479586 20635405 ~ 20637793 (+)
LOC110529573 serc1 coding upstream 639932 20471157 ~ 20477447 (+)
LOC110529585 LOC106571383 coding downstream 6244 21143069 ~ 21230110 (+)
LOC110529590 LOC106571388 coding downstream 269367 21406192 ~ 21424564 (+)
LOC110531076 LOC106571392 coding downstream 576335 21713160 ~ 21722182 (+)
LOC110529595 LOC106571393 coding downstream 635238 21772063 ~ 21774545 (+)
LOC110529596 LOC106571393 coding downstream 643045 21779870 ~ 21782714 (+)
G684314 NA non-coding upstream 39506 21077070 ~ 21078871 (+)
G684269 NA non-coding upstream 108062 21008957 ~ 21009317 (+)
G684267 NA non-coding upstream 108529 21008585 ~ 21008850 (+)
G684254 NA non-coding upstream 122718 20994448 ~ 20994661 (+)
G684021 NA non-coding upstream 292788 20824370 ~ 20824591 (+)
G684413 NA non-coding downstream 50357 21187182 ~ 21190169 (+)
G684547 NA non-coding downstream 251178 21388003 ~ 21388217 (+)
G684548 NA non-coding downstream 253046 21389871 ~ 21392904 (+)
G684554 LOC106571387 non-coding downstream 266125 21402950 ~ 21403576 (+)
G683845 NA other upstream 410008 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 484480 20626950 ~ 20632899 (+)
G683669 NA other upstream 553945 20562875 ~ 20563434 (+)
G682611 NA other upstream 1387708 19728833 ~ 19729671 (+)
G685215 NA other downstream 788292 21925117 ~ 21926356 (+)
G685311 NA other downstream 947049 22083874 ~ 22084224 (+)
LOC110529616 LOC106586086 other downstream 1286233 22419790 ~ 22433035 (+)
G685469 NA other downstream 1309946 22446771 ~ 22448073 (+)

Expression


Co-expression Network