si:dkeyp-114g9.1 (fbos)


Basic Information

Item Value
gene id si:dkeyp-114g9.1
gene name fbos
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21231292 ~ 21241150 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001197208.2
CAGGTGGCAAATATGGCACTTCGTGAGGATAGTTCGGAGGATGAGTTGCAGGGACAGTTCTCGCTTTTATCCGCGACTTCATTCGAGGTCACAGATGAAAGTGAGGACACACATGGACGCTCCGAAACGGGGATACTAGACTTAAGTGACGAAGTCTTTATTCTCATCCTACGACGGCTGGATCCCACGTCTCTCTTGAGAGTTGGGAGCACCTGCCGAACCCTGTTTCGAGTTTGTTCCTGCAACTCACTGTGGACAAAACACTTCCAGACCTCATTTGGAGTCCCGTTTGCCACCGCCGCCTGCTCCATCTCTGCCAAGAGTGCCTTCCGTTTGGTCTTCATGTGGCGAACTCTCTTTAGAAACCTGCATTGTAACCGGTCTCTTCAGGAGAAGCTCTTTGCAGAGATCCCATTCCCACCACACAAGTACTGGGTCCAGTGGCTGGTTCTGGAAGAGACTGTTCCTCTGCCCTCCGTGAGACTGCCTTGCACCGACATAGAGAGCTTATGGGGAATTGAGAAGGAAGTGTTGGAAGGTAAAGTCCAAGAGAAAGATGAGGATGAGGGCAGAATGCTGAAGTTCGAATGGAAGGAGCTGTATGCCTTGGCCCTTGAGCACCATGGAAGCATTGCCAAGGTTTTCCAGCATGTTCTCAACCAACAGAGCAATGACCACTGTGAGCTGGAGGCCATGTTCAGTCAGTACAGCCAGTGTCGGTTCCAGTGGCTCTTCACCTACTGGTTGTTCCGCCAGCCAGCGCCCTTCGACAGGCAGCTCAGGGCCATCTACCTGCAGTGGCAGAAGCACAGCAAGAGGAAGGTGGTGTCCTGGGGAGGCACGTTGTGTGACATCAGATACCTGGCCTCATTACATCACATCACTTCCGACTACTGGCGGGGCAAGCTGGCCCAGGGTGACGAGACTGTGGGAATTCAGACAGTGGAAAACTATTTCTCCATGTGCAAATCCCTGGTGGCCTGGATTTTAGGGCGTGACTGGGGCAGATTGAAAAGCAAAAAGGTGTACGAGGACACGCTGGAGGGTGTGTACCTGCTGCTGAGGAGGGAGATGCAGGAGACCCTGGTGGAGCACGAGAGGTTCTGGCAGGTGGCCAAGGTCCAGATGACCCGAGTGTGTACCCTGGAGGAGACTGCTGTAAACTATGTCAACTGGAAGATGATTGAAACACTGCCCTACTACAAGCTGTACTTGGTGTCAGGCAACATGGTTTACCTAGACCACGTGCAGGGCTTCCTCCACAGGAAGAGGCTGGTCCATGACTGGTTCTTCATGAAGGAGAACACCTGGGTCAGACAGCTGCTGCCTGGGGACCTCTACCCTCTGCTGGAGTTTGACACCAAGATCTCCCAAGACAGCCTGCATGGAGACTCCATGCCAGCCCAGCTGAGCAGGGTGATGTGGCTGTACCTCCACTCTGGACAGACACTCTACCTGGAGGCAGTGAAAGGCCTGGTGCTGCAGTGTGCTCAGGCCAGTCTGGGACACTTCTGCAGCCTCTCCCCTGGTGCCTCTATTCAGCCCCATgtcagctagctggctaacgcaGATTGATCACTCTGTTTTAGAGCCTCTACGAGATGTACAGTACCACGTTGTTGTTCTTTACTGGATCCAGTGTCCAGTGCTTTTATCACTTTTTACTGTATTTTAGCTGGCGAGCTGGAATTAATAGATTTTAAATGAATTTTTAAACTTGAATCTTTATCAATAGTTAATGAAATGTAGGCTATTGATGTACATTGTAGAAACCGTGTTTGCTGTcatgtaattactctacagccaACATTTGGGGCAAGCTATTGAAGTGATGACATTGCTCAATCATTCTCAAATGGTAAATGTGTCATATTCAAAGCCTAACAATTCTTGGCCAATTAACAGGCTAGAAACTTAACAGTGCTGGGTTGCTGTATAATGAATAAACAACTCTGACAAACTTA

Function

NR:

description
oocyte-specific F-box protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001197208.2 True 1964 mRNA 0.50 8 21231292 21241150

Neighbor

gene id symbol gene type direction distance location
LOC110529586 NA coding downstream 34094 21187530 ~ 21197198 (-)
LOC118965500 NA coding downstream 578748 20650227 ~ 20652544 (-)
LOC118965600 NA coding downstream 583763 20644656 ~ 20647529 (-)
LOC110529578 cx32 coding downstream 587094 20642316 ~ 20644198 (-)
LOC110529576 LOC106571374 coding downstream 589877 20637866 ~ 20641415 (-)
LOC110529587 LOC106571386 coding upstream 6002 21247152 ~ 21385603 (-)
LOC110529588 ngbr coding upstream 151188 21392338 ~ 21401110 (-)
LOC110529589 LOC106571387 coding upstream 160793 21401943 ~ 21406071 (-)
LOC110529592 LOC106571389 coding upstream 184469 21425619 ~ 21469294 (-)
LOC110529593 LOC106571390 coding upstream 258315 21499465 ~ 21504647 (-)
G684268 NA non-coding downstream 222667 21008334 ~ 21008625 (-)
G684258 NA non-coding downstream 232495 20998486 ~ 20998797 (-)
G684247 NA non-coding downstream 239003 20990098 ~ 20992289 (-)
G684015 NA non-coding downstream 409905 20821152 ~ 20821387 (-)
G684714 NA non-coding upstream 35026 21276176 ~ 21276701 (-)
G684690 NA non-coding upstream 46602 21287752 ~ 21291905 (-)
G684789 NA non-coding upstream 142768 21383918 ~ 21384286 (-)
G684791 NA non-coding upstream 145980 21387130 ~ 21387516 (-)
G684792 NA non-coding upstream 146666 21387816 ~ 21388049 (-)
G681659 NA other downstream 2439155 18791230 ~ 18792137 (-)
G679471 NA other downstream 4116764 17113543 ~ 17114528 (-)
G679210 LOC106571290 other downstream 4601033 16625090 ~ 16630259 (-)
G679087 NA other downstream 4798278 16432621 ~ 16433014 (-)
G676635 LOC106571254 other downstream 6714764 14508329 ~ 14516528 (-)
G684844 NA other upstream 237616 21478766 ~ 21479203 (-)
LOC110529207 sprtn other upstream 679277 21920427 ~ 21926307 (-)
G685953 NA other upstream 917880 22159030 ~ 22161042 (-)
LOC110529643 LOC106571435 other upstream 2375757 23614938 ~ 23659111 (-)
G687890 NA other upstream 2394159 23635309 ~ 23637408 (-)

Expression


Co-expression Network