LOC110529592 (LOC106571389)


Basic Information

Item Value
gene id LOC110529592
gene name LOC106571389
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21425619 ~ 21469294 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611935.2
GGGGTGTGCAGTTGAACTCAACAACAATTATTTTGATCAAGTGTTGCCTCTTGCCTGTCTTGGCTGCTCAACAAATATACTCCTCTTCCCAACGGACACCGTGGCTGTCAGACTGGTTGGTCGACCTGAGCACTGGGTGCCGCCTGTGGATGAAACACGGAAGAGTTCATTCAAGGAATCTACTGTGGAGATACAGGCAGGATAGAAGCACACGGAGCGCATCGGGATCCTTTGATTTACAGCAAACCTTCCTGAAGAAAATTATCCCATGAAGACGAGACAAATGTGTCTCCATATGCAATTTCGTTGCGTAACTTTGGATAGAATCTGAGATGTTGGGAAAGGAGAAACTTAATGGATTCTTTGTCGTTTGGACTATACTTTCCGCGTTTGGCGAAAAACTCGATGACGGTTGTGGCCACTCCATGCTGGGCCCAGAGAGCGGTGTCCTCTCCTCTAAGAACTACCCGGGAACCTACCCCAACAACACCTGGTGCGAATGGAAGATCCGCGTGCCAGAGGGCAACAGCCTGGTCCTCAGGTTCGGAGACCTGGACGTGGAGGCACGGGACTGCCAGTCGGACTACGTCAAGGTCCTCAAGGGTGTCTACGGAGGCGAGCATGTGTATGGGACGTTCTGTGGCAGCCTGAAGTCCTACCCAAGAGAGGTACACACGGACTCCAATGAGGTCATGGTCCAGTTCCGCAGCGGGCGCCACATCTCAGGCCGAGGGTTCCTGTTCTCCTACTCCTCAGGGGACCACAGAGATCTGCTCACATGTTTGGATAAAGGCAGCCATTTCTCAGATTTAAAATACAGGAAGTACTGTCCGGCAGGATGCAAAGCAGTGGCAGGTGACATATCCGGGGACATTTCCCAGGGTTACAGGCATACGTCTGTGCTGTGTAAGGCTGCCGTCCATGCAGGGGTTATCCTGGATGAGTTAGGAGGCTGGGTATCCGTGGAGACCCACAAAGGCCTGAGTCACTACCACGCCACCAGAGCCAATGGGATCCAATCCAAAGACGGCTCTTTGTCCGAAGCGCTCTTCACGTTCCTCATTAATGACTGTAAGAACCAGTCAGTGTTGCAGCATGTGTCTGTTAGTGCCAGTTCGTGGGGAGAAGCGACGGGTTGTCAGTCTGATTGGGCGCCCAACAGCTCCCAGGCTGACCCAGGATCAAGGGGCTGCACCTGGGCTGCAGATCAGAACGACAGCCTGCAGTGGCTCCAGCTGGACCTGGGGGAGAAGAAAAGGATCACAGGGATTATCACGACTGGCTCTACTATGTTGGGCTATCACTACTATGTAAGGAGCTTCAAGATAGTTCACAAGGAGAGGAGTCGGTGGAGGACTTacacacagaacaacagcacACAATACATGATATTTGAGGGGAACCAGGACAGTCTGCATCAGACCAGGAACACCTTCCACAATCCAATCATAGCCCGCTACCTGCGGATCATCCCTCAAACCTGGCACCAGAGGATTGTCATGAGGGTAGAGCTGCTGGGCTGCACGAATCTCAGAGTGAACATGTCGTCCCAGGTCACATTACCCACCAAACCCAAGCCTCCGGTGGGGGACGAAGAGATCACTGAGCCAGTGCCCTCCCAGGCAGACCGCGGGAAGCTGGCCATCATCATCGTACCCATAGTCTTATCTGTGGTGCTCCTGCTGGTTGGGATTTGTGTATTCAAGATGCTGCAGAAGAAGAAGACAAAGGAGAACTCATACGGATCCTCTGATACCCAGAAAACAGGTTGCTGGAAGCAGATCAAGCAGCCGTTTGCCAGGCACCAGTCCACAGAGTTCACCATCAGCTACAGTTCAGAGAAAGACCCAATACAGAAACTAGACCTGGTCACCAGCACCATGGCAGAGTACCAGCAGCCTCTGATGATTGGGACGGGCACAGTGACCAGGAAGGGCTCTACGTTCAGGCCCATGGACACCGAGACCAAGGAGGACCCTAGCGACCCGTCCACCCACTACAACTACCTGCACACAGCCAACCAGTACGCCCTGCCCCTCACCAACCAGGAGCCAGAGTACGCCACACCCATCATCGAGCGCCACACCTTCCACAAGGATGGCTTCCTGCCAGACCCGGCCAACTACTGCGTTCCAGGTGTTGTCCTCAGCAAGACCCCCTCCTTTAAAACCATGGACAGGAAAGCAGGGGTGGGCTCCTCCGGGGGCTACCAAACCCCCCAGGTCAAAACAGGCCGGGGACACAGTAACTCTGAGGGGGTCTACGACAGCCCCAAGGTGAACAAGCCTGTGGCCCAGAGCAAGAGCTGTGGCTGCTCAGACTACCAGAGACCCCAGGCCAAGCCAGCAGCGCTGGAGAGCTACTCCACCCCCAGGGACTGTGTGAGGGTGGCCCCCGCCATTGGCCACAGGCCGGACCATCGACCAGACCCTGAGGGCAGCTCTGGAGGAAGCTGATGATGGAACATCTATGGGACTACAGGACAAACTGTCAAACTAATTTCTATCAGTTCACGGCCGTTTTAGATGGACCTCACTGTAGTAAACACAACCAATCTCATCTAAATGGTCAATTATTTCTCAACTGACTTCCGGCATGCGGGAGACGACTGTGTTTGCTGTGTGAAACGGAGCTACAGGATGAACTGGGTGCATCTGAGGCTGTGCAAGCAGACATCAAAATACAGATGGTTACTTTTATTTTCCTCTTTATGAGGTGATTTATTAAAAAGAAAATAGTTATGAGACAGGACATGTCCCTAAAAATGGGAAAATACCTCCCCTCATTCtcaactgtgactgatgtttgTGACTGTAACATAAGATTGAGATAATGTGACTCGGTTCCTtgactgtacagtatattattatggTGAAGCTGTTTTCAGCAGGAAGACATAGAGGAAGCAGAGTGCTTGTTAAGTAAAGCAGCACCCAGTTTAAAGTGGCAGATTTGTGTGTCCCCAGCGGGTCCTACTATAGAGAGATTTATGCAGTCAGTGGAGTTGGCTCTTAACAGAGAACTGTAAGGACACACTGTGACTGAAAGGACTGGTGTCACAGCATGGGGTCCCCCACAATGGGGGTTCTGTTACCATGTTGCAGGTGGCTCTATGCTCTAAAGCCGAGTGGCTGCATCGCTGCTCTGTATCAAAGTCTGGAGGCAGATCTGGCCAGTGTGGGCAGAGAGCCCATGAATAGGCAATGGGAGAGAGTGTACAGTTAGTCTGGCATATTTAGAAACACCCAGCTGGGGATTTAGGGGAGTACAACTGGACTACAACACATCACAGAGCTGTTTTTATAtgatctgttaaactgaactagATCAAGAACTACTGTAAAGGCCTGTTCTTTTTTAAATGGATGTTGATCACAAAGCCATGTTAAATGGTGCCATTCCTACAGTGTATACATACATGTGCATAGTTTGAACATGTTTATTGTCAAgagtaaagaaaaaaaaatagaattgCTGTCTTGTGCTGTCGACTATATTAAAAGCACCAGTGAGTGTGGTGTTGCTGCTGTGTACGAAGGACCTTAGGATGTAACTAAGAACTCTTTAATTTCTGTGAAATATTTTGTGGAGATCTTTCGAGCGGGGTTGTATGTAAGTGCAGTACTCCGTCTGATCGCTGCAAAAAGTTTGTCACTCTCATTCAAAGTGTGTCTACTGACTGTTGGCTGTAAACTGAGCCCTGAATAAAAACACGAGCAGTTGACCT

Function

NR:

description
discoidin, CUB and LCCL domain-containing protein 1-like

GO: NA

KEGG:

id description
K24794 DCBLD; discoidin, CUB and LCCL domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611935.2 True 3727 mRNA 0.51 15 21425619 21469294

Neighbor

gene id symbol gene type direction distance location
LOC110529589 LOC106571387 coding downstream 19548 21401943 ~ 21406071 (-)
LOC110529588 ngbr coding downstream 24509 21392338 ~ 21401110 (-)
LOC110529587 LOC106571386 coding downstream 40016 21247152 ~ 21385603 (-)
si:dkeyp-114g9.1 fbos coding downstream 184469 21231292 ~ 21241150 (-)
LOC110529586 NA coding downstream 228421 21187530 ~ 21197198 (-)
LOC110529593 LOC106571390 coding upstream 30171 21499465 ~ 21504647 (-)
LOC110529205 LOC106571539 coding upstream 70588 21539882 ~ 21545761 (-)
trnal-cag-4 NA coding upstream 84764 21554058 ~ 21554140 (-)
afdna LOC106571391 coding upstream 89664 21558958 ~ 21688064 (-)
LOC110529598 s22a2 coding upstream 347418 21816712 ~ 21822446 (-)
G684767 NA non-coding downstream 1080 21421794 ~ 21424539 (-)
G684792 NA non-coding downstream 37570 21387816 ~ 21388049 (-)
G684791 NA non-coding downstream 38103 21387130 ~ 21387516 (-)
G684789 NA non-coding downstream 41333 21383918 ~ 21384286 (-)
G684837 NA non-coding upstream 2321 21471615 ~ 21471826 (-)
G684863 NA non-coding upstream 21996 21491290 ~ 21491572 (-)
G684864 NA non-coding upstream 22415 21491709 ~ 21491926 (-)
G685004 NA non-coding upstream 50829 21520123 ~ 21520354 (-)
G685006 NA non-coding upstream 52451 21521745 ~ 21522034 (-)
G681659 NA other downstream 2633482 18791230 ~ 18792137 (-)
G679471 NA other downstream 4311091 17113543 ~ 17114528 (-)
G679210 LOC106571290 other downstream 4795360 16625090 ~ 16630259 (-)
G679087 NA other downstream 4992605 16432621 ~ 16433014 (-)
G676635 LOC106571254 other downstream 6909091 14508329 ~ 14516528 (-)
G684844 NA other upstream 9472 21478766 ~ 21479203 (-)
LOC110529207 sprtn other upstream 451133 21920427 ~ 21926307 (-)
G685953 NA other upstream 689736 22159030 ~ 22161042 (-)
LOC110529643 LOC106571435 other upstream 2147613 23614938 ~ 23659111 (-)
G687890 NA other upstream 2166015 23635309 ~ 23637408 (-)

Expression


Co-expression Network