XLOC_025751 (CT573476.2)



Basic Information


Item Value
gene id XLOC_025751
gene name CT573476.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 52828912 ~ 52829006 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00050620
aaaagaagatattttgaaaaatgttggaaaactgtaaccattgacctccatagtatttgttttttctgctatggaagtaaatggttacaggtttt

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000108067

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00050620 True 95 miRNA 0.29 1 52828912 52829006

Neighbor


gene id symbol gene type direction distance location
XLOC_025749 gmip coding upstream 27610 52737565 ~ 52801302 (+)
XLOC_025748 colgalt1 coding upstream 96878 52702700 ~ 52732034 (+)
XLOC_025747 pgls coding upstream 128302 52684556 ~ 52700610 (+)
XLOC_025746 BX511096.1 coding upstream 208737 52620058 ~ 52620175 (+)
XLOC_025745 slc27a1a coding upstream 225229 52545014 ~ 52603683 (+)
XLOC_025752 atp13a1 coding downstream 70795 52899801 ~ 52952026 (+)
XLOC_025753 dsn1 coding downstream 124483 52953489 ~ 52980049 (+)
XLOC_025754 pbx4 coding downstream 170956 52999962 ~ 53076469 (+)
XLOC_025755 brd4 coding downstream 287166 53116172 ~ 53224280 (+)
XLOC_025756 pet100 coding downstream 399678 53228684 ~ 53231344 (+)
XLOC_025429 BX649540.1 misc upstream 22579876 30248739 ~ 30249036 (+)
XLOC_025739 NA non-coding upstream 436707 52390252 ~ 52392205 (+)
XLOC_025738 NA non-coding upstream 439873 52377578 ~ 52389039 (+)
XLOC_025737 BX511132.1 non-coding upstream 449440 52367302 ~ 52379472 (+)
XLOC_025735 NA non-coding upstream 564766 52224103 ~ 52264146 (+)
XLOC_025761 NA non-coding downstream 697959 53526965 ~ 53652401 (+)
XLOC_025764 CU633748.1 non-coding downstream 1238517 54067523 ~ 54067639 (+)
XLOC_025765 NA non-coding downstream 1282383 54111389 ~ 54111972 (+)
XLOC_025766 NA non-coding downstream 1441697 54270703 ~ 54271345 (+)
XLOC_025767 NA non-coding downstream 1454761 54283767 ~ 54284185 (+)

Expression



Co-expression Network