LOC110529606 (exoc8)


Basic Information

Item Value
gene id LOC110529606
gene name exoc8
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21927010 ~ 21929650 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611961.2
CTAGTCGCCGGACGTCTCGTGACGTTTTGGGTGTTAACCTATTTCCCTCTTCCTGACTGTTAGCACTGTGCAGCTAAAATTTAAAAAAGAACAAACTGGTCAGCAGTTGTTCTCACCTATTTCTGTATATTATTATTGTTCTAGCACATgtttgtaatctgaagaatatACCTTAAAACGTTGGAGATGACAGACCAGGCGAACAGACTGCGCAAGCAATTGGAATCAGCTAATTTCGACCCCCAAAATTATGTCAAGCATCTCTCACAACAGTCTGATGGCGACAGAGATTTGCAGGAACATCGTCAAAAAATACAGACCCTAGCAGATGAAACGGCTCAAAACCTGAAGAAAAATGTCTACAAGAATTACAGACAGTTCATCGAAACTGCCAAAGAGATTTCGTACCTGGAGAGTGAGATGTACCAACTGAGTCATATTTTGACAGAGCAGAAGAGTATCATGGAGAGTATTACCCAGTCTTTGCTCTCAACAGATAAGGATGAAACGGCAAAGGAGATGCTTGCAGCATTCCCcaaagagacagaggaagtgaaacAGAGAACACTGACTACACTGCTTGAGAAAGTAGAGGGGTGcaaaaacattatggacacccCAGGCAGGTATTTAGTGTACAATGGCGACCTGGTTGAATATGATGTGGACAACATGGCACAACTTCAAAAAGTGCATGCCTTCCTGATGAATGATTGCCTTCTTATTGCCACCTGGTTAGCGAATCGCCACGGTACAGTGAAGTACAAATACAATGCACTGTATGATCTGGAGAGCTTTGCAATCGTCAACGTGAAAGACCATCCCCCAATGAAGGACATGTTCAAAATCCTGATGTTCCCCGAAAGCCGCATATTTCAGGCAGAGAACAGCAAGATTAAAAAGGAGTGGCTGGAGATCCTTGATGAGACAAAGAAAAATAAAGTGACTAAGGAAAAACATAAGATGGAAGAGGTAGAGTTGCCCAATTCACCTGTGAGACCAGAGGTCTTGGTCTCGACCAACCCTTTTGATGACGAAGAGACCAACCCTTTTGACTCAGAGGAGGCAGTGGATCTGGGATTGGAGTGGATCCAGGAGCTTCCCGAGGACCTGGACGTGTGCATTGCCCAACGGGACTTTGAAGGTGCCGTGGACCTCCTGGACAAGCTGAACGAGTACCTGAAGGACCAGCCTGTCAATACGATGGTGAAGGAGCTCAGAGTGAAGGTGGATGAGCGTGTCCGACAGCTGACGGAGGTGCTGGTGTTTGAGCTCTCTCCTGACCGTTCCCTCCGTGGGGGACCTAAAGCGACCCGTCGGGCAGTGTCTCAGTTAATCCGGCTGGGGCAGTCCACCAAGGCCTGTGAGCTCTTCCTGAAGAACCGAGCCGCTGCTGTGCAGACCGCTATCCGCCAGCTGCGCATTGAGGGGGCTACTCTGCTCTACATACACAAGCTCTGCAACATCTTCTTCACTAGCCTGCTGGAGACGGCCAAAGAGTTTGAGATGGACTTTGCCGGTAACACAGGCTGCTATTCTGCATTTGTGGTCTGGTCGCGCTCATCCATGAAGACGTTTGTGGATGCCTTCAGTGGGCAGGTGTTTGACAGCAAGGAGAGCCTCTCCACTGCTGCTGAGTGTGTCAAGGTGGCCAAGGAGCACTGCAAGCAGCTCAGTGAAATTGGCCTGGACCTCACCTTCACGTTGCAGTCCCTCCTGGTGAAAGACATCAAGGCAGCCCTGCAGAGCTACAAGGAGATCATCATTGAGGCCACCAAGCACCGAAACTCTGAGGAGATGTGGAGGAAGATGAACCTGATGACTCCAGAGGCTCTGACCAAGCTGAAGGAGGAAATGCGCAGCTGTGGCATGAGCAGCTTCAATCAGTATACAGGAGATGACTGCTGGGTCAACCTCAGCTACACCATTGTGGCCTTCACCAAACAGATGATGGTTTTCCTGGAGGAGGGGCTGAAGCTCTACTTCCCAGAGTTGCACATGGTCCTGCTGGAGAGCTTGAGGGAGATCATCCTTGTGGCTGTGCAGCACGTCGATTACAGCCTGCGGTGTGAACAGGAGGCAGAGAAGAAAGCCTTCATTCTCCAAAATGCCTCCTTCCTGCACGATACTGTCCTCCCTGTGGTGGAAAAGAGGTTTGAGGAAGGAGTGGGGAAACCTGCTAAGCAATTACAGGACTTGAGGAAAAGTGCACGGCACATTCGTGTCAATCCTGATAGCACTATGTCTCAGGTCTAGTGTGTGGATGATAACCTGTTGTGAACAGCACTTTTTGTTGTATTGATGCCACTGTTGAACTTCAAATCTTTGGCCAGAACTGATGAAATCTGTATTCTGCTATGTCATATAGGCTATTCCGTGATGATTCTTTCTGTTGAATGTGATGTTGAAGACAATGACATCGATATAGTTTGTGGTTTAAGAATTTCACTAATTTTTCCTGTGCTTGATGACATAGCATTATGAATAGTAGGCTAACTGGAATAAGATGACTGATTCATAAAGCCATGTATTAACTTAACGTAGTTAGGAATGTTATTGATTTGTATGAATGCGCCTCTGAAAATCGCTATGGTATCCCAAAAATTATCTTTCAAAATAAAAAGTGTATGCATTATAACAA

Function

symbol description
exoc8 Predicted to be involved in Golgi to plasma membrane transport and protein localization. Predicted to act upstream of or within exocytosis and protein transport. Predicted to be located in growth cone and perinuclear region of cytoplasm. Predicted to be part of exocyst. Orthologous to human EXOC8 (exocyst complex component 8).

NR:

description
exocyst complex component 8-like

GO: NA

KEGG:

id description
K19986 EXOC8, SEC84; exocyst complex component 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611961.2 True 2641 mRNA 0.47 1 21927010 21929650

Neighbor

gene id symbol gene type direction distance location
LOC110529604 NA coding upstream 15581 21905011 ~ 21912494 (+)
LOC110529601 LOC106571541 coding upstream 47422 21876894 ~ 21879588 (+)
LOC110529600 LOC106571396 coding upstream 50266 21874399 ~ 21876744 (+)
LOC110529597 LOC106571394 coding upstream 110320 21789216 ~ 21816690 (+)
LOC110529596 LOC106571393 coding upstream 144296 21779870 ~ 21782714 (+)
LOC110529607 LOC106571401 coding downstream 1392 21931042 ~ 21958665 (+)
gnpat LOC106571402 coding downstream 31351 21961001 ~ 21970793 (+)
LOC118965501 NA coding downstream 358636 22288286 ~ 22292263 (+)
LOC110529613 LOC106571406 coding downstream 388843 22318493 ~ 22403025 (+)
LOC110529615 topk coding downstream 476515 22406165 ~ 22409857 (+)
G685215 NA non-coding upstream 730 21925117 ~ 21926356 (+)
G685212 NA non-coding upstream 13186 21913573 ~ 21913824 (+)
G685183 LOC106571395 non-coding upstream 62359 21864060 ~ 21864651 (+)
G685164 NA non-coding upstream 101725 21824969 ~ 21825285 (+)
G685365 NA non-coding downstream 230973 22160623 ~ 22161261 (+)
G685415 NA non-coding downstream 302973 22232623 ~ 22232848 (+)
G685495 NA non-coding downstream 423882 22353532 ~ 22354430 (+)
LOC110529616 LOC106586086 non-coding downstream 490140 22419790 ~ 22433035 (+)
LOC110529590 LOC106571388 other upstream 502446 21406192 ~ 21424564 (+)
G684314 NA other upstream 848139 21077070 ~ 21078871 (+)
G683845 NA other upstream 1219639 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 1294111 20626950 ~ 20632899 (+)
G685311 NA other downstream 154224 22083874 ~ 22084224 (+)
G685469 NA other downstream 517121 22446771 ~ 22448073 (+)
G685551 NA other downstream 550673 22480323 ~ 22482139 (+)
G686448 LOC106571417 other downstream 1016851 22946501 ~ 22972836 (+)

Expression


Co-expression Network