c8h1orf131 (cssa15h1orf131)


Basic Information

Item Value
gene id c8h1orf131
gene name cssa15h1orf131
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21958205 ~ 21961107 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611965.2
CATAAAAACATAGATGCTGCTTTGGCTGAATCGTCAGCAGAGATTTAAGCTAGATATGTATGTTTGACTCGCTGGATAATTCCCTGCTGTGAATGGCTACTTCCTTGTTTGTACATTAAACTACGGTGGCCAAGATACGACATCCTGATCCTGTTGCTTTTCAGATGCATAGTACACACACGTGTGTACATTGGTTTGTTATCAGTCATCCACAATCGTGTTTTTTCTTTGTTTCCCTATTTTATTACGTATTTTTATGGTATTAGTTTAGTCACTGCTTGAAATGGACAACAACGAAAATGGAAAGGAAGAAGACACGGATCAGTTTTTTCTTGACCATGTCCTGAATACGCTGTATGATTTCGGTGATCGAACAGTATCAAAGAGAGAACACAAGTCACAGAAGAAGAGATCCCaaaggagtgaggtagaggacgAGGACACCGCTGCAGACGATTGCAGTGATACTAAAGACAGTCTGGAAGTCAGACTTTCAGATATCTCAGCGATTGACCTTCCTGGTGCGTCTGAAGTTGGAAACACAAGTTTAACCACTAAACAGGCACCACCAGTAGAGGTGGTCACATTCCAGGATCCTACAAAGAGACCGAGACAAGCCAGAAAGCCACCAGTGCCCGAGGTCAAGGACAAGCCTcctcaaacaaaagagaaaaAGGTGGACCCAGATGAATTCAGTCTAGAAAAGGCTCGGTTAGAAGTTCATAGATTTGGAATCACTGGATACCAGAAAGTGCAGCAGAGGGTTTTTGAACAGGAGCGAGCCATCATGCTTGGAGCAAGGcCCCCTAAGAAGGAGTATGTAAACTACAAAGTGTTGCAGCAAAGGGTTAAGGACAAAAAGCAAAAGGCAAAGGACGAGATTCAGACGGACTTAAAGAAAAAGAAGATGACTAAACCAAGGGATGAGAAGAGGAAGTCATCGTCCAGTAAAGCTCCAACAGGCCAGGTGGGACGCTTTAAAAATGGAATGCTGGTCCTGAGCACCAAAGAAATTCAGAAAATAAAAGCCTCCATCAaaaaaaaataagtttaaaaTAAATGCCACAAAAGTGATGAAGTGAAAACAATGATTAAGAGCATTTTTGGGAGTTAAGAGACTTTTCACATGAAGATGCAGTAACGGACAATTGATGTCCAAGCCACAATTAACATAATCCCAGAAAGACTACAGAAAAGATATGAAGAGCACATTTATATTCCATCACAGTTTATTCATTATATAAAGGAAAGACAGCATTTTCTTCATCTTTTAAACGGTATAATATGAAAACAATGCCAACTCATTTCATATACAAACCACTTAGAAGTACGAAACGTTTACATCGTATGATAACTAAAGAACATACGTAACAGAATTCTATAAAATAAAGCACAGCTTTTTGTGAACACACTGGACACGGATGCCAGTGTCCTAATGGACCAGTTGACATTCCCTATGAGGTTTGGTGGTGCACCCTGCCTAGTTCTCTGGTAGTGTGGCAGTGGGAGGGCACTAGCCACGACCCCAGGGCATGTGTGTTTAGAAGAGAGATGTCCCCCAGACACGGCAACAACCTTCCCCACATGGCATACTGAGGGTGGGAACAGTAAACGTGGGCAAAATAAATCTCAGAAATGTATTATACATTTATAAataaatggatgaaataaa

Function

NR:

description
uncharacterized protein C1orf131 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611965.2 True 1672 mRNA 0.41 7 21958205 21961107

Neighbor

gene id symbol gene type direction distance location
LOC110529207 sprtn coding downstream 31898 21920427 ~ 21926307 (-)
LOC110529605 LOC106571399 coding downstream 39416 21915516 ~ 21918789 (-)
ttc13 LOC106571397 coding downstream 53162 21887973 ~ 21905043 (-)
LOC110529599 LOC106571395 coding downstream 85743 21832528 ~ 21872462 (-)
LOC110529598 s22a2 coding downstream 135759 21816712 ~ 21822446 (-)
LOC110529611 LOC106571404 coding upstream 46643 22007750 ~ 22288163 (-)
LOC110529612 LOC106571405 coding upstream 349274 22310381 ~ 22315605 (-)
LOC110529614 LOC106571407 coding upstream 448897 22410004 ~ 22416404 (-)
LOC110529617 LOC106571409 coding upstream 485608 22446715 ~ 22459584 (-)
LOC110529618 LOC106571410 coding upstream 520673 22481780 ~ 22496418 (-)
G685762 exoc8 non-coding downstream 28574 21927047 ~ 21929631 (-)
G685784 NA non-coding downstream 45016 21912964 ~ 21913189 (-)
G685776 NA non-coding downstream 71470 21886461 ~ 21886735 (-)
G685721 NA non-coding downstream 160183 21751001 ~ 21798022 (-)
G685740 LOC106571393 non-coding downstream 176915 21772241 ~ 21781290 (-)
G685868 NA non-coding upstream 86651 22047758 ~ 22048399 (-)
G685895 NA non-coding upstream 121805 22082912 ~ 22083121 (-)
G685903 NA non-coding upstream 128654 22089761 ~ 22090027 (-)
G685911 NA non-coding upstream 140534 22101641 ~ 22101894 (-)
G685953 NA non-coding upstream 197923 22159030 ~ 22161042 (-)
G684844 NA other downstream 479002 21478766 ~ 21479203 (-)
G681659 NA other downstream 3166068 18791230 ~ 18792137 (-)
G679471 NA other downstream 4843677 17113543 ~ 17114528 (-)
G679210 LOC106571290 other downstream 5327946 16625090 ~ 16630259 (-)
LOC110529643 LOC106571435 other upstream 1655800 23614938 ~ 23659111 (-)
G687890 NA other upstream 1674202 23635309 ~ 23637408 (-)
G687979 LOC106571438 other upstream 1793725 23754832 ~ 23756910 (-)
G688109 NA other upstream 2026992 23988099 ~ 23988854 (-)

Expression


Co-expression Network