LOC110531077


Basic Information

Item Value
gene id LOC110531077
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 22503872 ~ 22506362 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614353.2
ATGACGGTTCAACATGAAGTATCTCTGCTTATTGTAGAGATCCAACTGTTTGCCAGTAAAAATTCAGATGGACAAACTAGTGTCAAATTTGGTGTTCTGTTCAATGCCTATAAGTGCACCAATATCTTTGAGGCTTTGGTTGTGATTCTGAGGGCTGCCAAGATCTTTCTGAGGGCTGCCAAGAGGAAAAAGATCATCGCTTTTGAAGGGGAGCTGCTCCTGCAAGGTGTCCATGACAATGTTGATAACCATCAGCTTCATTCTTGTAGGAGTGTGTTATCATTATTCAGGTGATAAGTCAAGCGTTTCTTTGAGGCTTTACTATTACATCTACCAGGGATCATAAATCAACATTTTATAAATTCTTAGGACTACAAATATTGTATTTCTAGGGGATGAAATACGTAGACTTCTTAGGAAACAACTTCCTGCTGTTTTATTAACCCTTACAGGAATCACTAAATGGCAAATTAATTGATTGTTTAAATGGTAATTTTGCTACCTCGTGTGGAACTCCTTAGAAAAACTAAGATAGCAAGTGCTTCAAGAGAGACCTTTGCACATACTGCTTTTGCAAAAGCCTCTCTTGAAGCACTTGCATTTTAGTTTTTCCAATGCATGGTGCTACTGTTATTCAAGGAAACACATACTTAGTATTGTGCTCTGGTAGGAAAGAAATGTGAAACTTGATATGGGAAGCAATTGTAATTCTTCAAGGAAATGgttagaaaaataaataaaaacaatgacaAATTTAGCATTGTACAATTTCTCTGAACTAATACAATGCATTTACAGTATGATCATTATCAAACTTCA

Function

NR:

description
costars family protein ABRACL-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614353.2 True 819 mRNA 0.36 2 22503872 22506362

Neighbor

gene id symbol gene type direction distance location
LOC118965502 NA coding upstream 5600 22496445 ~ 22498272 (+)
LOC100136120 LOC100136120 coding upstream 25316 22473965 ~ 22478556 (+)
LOC110529616 LOC106586086 coding upstream 78224 22419790 ~ 22433035 (+)
LOC110529615 topk coding upstream 94015 22406165 ~ 22409857 (+)
LOC110529613 LOC106571406 coding upstream 100847 22318493 ~ 22403025 (+)
LOC110529619 hdc coding downstream 482 22506844 ~ 22512029 (+)
gje1 LOC106571413 coding downstream 298542 22804904 ~ 22809549 (+)
vta1 LOC106571414 coding downstream 303520 22809882 ~ 22857289 (+)
adgrg6 LOC106571415 coding downstream 353652 22860014 ~ 22915654 (+)
aig1 LOC106571419 coding downstream 570022 23076384 ~ 23144537 (+)
G685562 NA non-coding upstream 37973 22465698 ~ 22465899 (+)
G685539 NA non-coding upstream 62664 22440998 ~ 22441208 (+)
G685495 NA non-coding upstream 149442 22353532 ~ 22354430 (+)
G685575 NA non-coding downstream 7699 22514061 ~ 22514365 (+)
G685610 LOC106571411 non-coding downstream 68758 22575120 ~ 22577488 (+)
G686253 NA non-coding downstream 179437 22685799 ~ 22686047 (+)
G686292 NA non-coding downstream 204381 22710743 ~ 22710956 (+)
G686296 NA non-coding downstream 207164 22713526 ~ 22713788 (+)
G685551 NA other upstream 21733 22480323 ~ 22482139 (+)
G685469 NA other upstream 55799 22446771 ~ 22448073 (+)
G685311 NA other upstream 419648 22083874 ~ 22084224 (+)
G685215 NA other upstream 577516 21925117 ~ 21926356 (+)
G686448 LOC106571417 other downstream 440139 22946501 ~ 22972836 (+)
LOC110529640 LOC106571431 other downstream 978070 23484408 ~ 23524035 (+)
LOC110529210 ift172 other downstream 1478083 23961761 ~ 23991295 (+)
G688613 NA other downstream 2476367 24982729 ~ 24984826 (+)
G688823 NA other downstream 2552591 25058953 ~ 25061450 (+)

Expression


Co-expression Network