adat2 (adat2)


Basic Information

Item Value
gene id adat2
gene name adat2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23146458 ~ 23151249 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611995.2
TATCTTCCCCTTCAATGTGCGCAAATTTGTTCCAGGCAGACGGTGGGGATTTTATAACTGTCGCATGAGCTCTCTGTAATTGGAGTAGCTAGTTGGTGTGCGTTTGTGTAATCTAATTTATCTAGTTTCTCAGACTGTACATTCAACATGGGGACAGAGCATGTGGGGAATGATGTCGTTTCTAAAGAGAACTTCCAGCCATGTGCCGAAGACATACAGAGGTGGATGGCTAATGCCTTTGACATGGCAAAAGAAGCCTTGGAGAATGGTGAGGTGCCTgttggatgtctcatggtctacAACAATGAGATTCTTGGAAAAGGGAGAAATGAAGTGAATGAAACAAAAAATgCCACTCGCCATGCTGAGATGGTGGCTCTGGACCAGGTGCTGGAGTGGTGTCGTCATAGAGACCTGGACCCCAGGACAGTGTGTGAGAGGACTGTGCTCTACGTGACTGTGGAGCCTTGCATCATGTGTGCAGGAGCTCTTCGCCTGACCAACATTCCTCTAGTGGTCTATGGGTGTAATAATGACAGGTTTGGTGGCTGTGGATCTGTTCTAGACATTCCCTCGGCTGATCTACCTCACACTGGCTCATCATTTAAGTGTATCTCTGGCTTCAGAGCAGAGGAAGCAGTGGAGATGCTGAAGACTTTTTATAAACAGGAGAACCCTAATGCTCCCAAGCCGAAGACGAGGAAAGAGTGATATTTTGTTGGTGTCCAGCAGGGGGCTCTAGACTTTAAGAAATGAGGTGAGGAGCAGAGAAGGATGATGTAAATGGAGTAGCTAACAAAGCTTTTTCCCTAAACAGACTTGGATTTGTCTTTCTGACAAAGGAatcaaatagattttttttgtgttCTCACTTATTTGCTCAGACGTTTGTGTTAGCACTCATTTTCATTTTCATATTATTGACAGTATATTAGACCCTTACAGTATAGTTTGGCTGGACACAAACGTCTGGAAAGTGGCTTGATTGTGATGCTTTGCAGGCTCTGTATCTTTCCTGTGTGGTTGGCTATGTGAGGAGCTGCTGCTGACTTTATTATGGTTATTAGTGTACTGTACCAAGTAGACAGAAACTGTCCGGTCTGCATTATTGTCTGGGTTCTCTTCTTCTCCATGTTCTCATCTAACCCAGAATGTGATCTCACTCCGAGCACCCTGGGTCTAGGATGAGCTGAGCTTAAGGCAGGTACCGGGGGCCCCTCAGCAACCTCTaaaggagctctctctctctctggcgtcAGTCATCAACTGCCGTCATGGATCTGAAATCAGTGTTGCCCCCCGAGGCCATTTCCCACTCCAATGTATCATGTCTGTGATAGTTTCTGGGTTTGTTATGCATGTCTTGGATTGTTAAGTACTGGCGTCGTCATGTACAATAGGATGGTGGGGTTCTCTACTTTGAAAATGTTGTGATTACTAAGTGGCATAGCTGctttgtgatttatttattttctgctgAAGAACAAATACATATTCACAGCATTAGTCTCAGCGGGAGAAGGAACACTGAATAGTATAATAGACTGGGAGCGCCCATGCAGACAGTCCTGTCTCTCCTACTGAATGACTAGGCCAGACTTCACTGCAGAGGGACCATATTTCAATGTGGGACCAACTTATTTCAGATCAGAAAGGAGACAAATGTCCGTTCCATCGTCTCCCGCAGGTATTTTGATCTCAGTCTCAGTAACCACCAACACTCACACCAGCACTGCAGTTTGGTGTGTGACAAACGGAATGTGTTTGTAGCGTAGAGCACAGCTGTGAGGGGTAATAGTCAGTCTGAAGCGCCTCCCCTTCACATAGCAGCAGGCCGGCAGCATCCCTCAGCCTTAAACCCTTAGTGGTCTCTTCCCTGGACAGGATCAGGAACAGAGGAAGTAACCGCCCAGTCAGCATCAGACAGTTCCGGTTGTACCAGCTCCAAGTGACTGCtccacactgacctgctgtagcTTTCACTATTGTTTAAAACTCTCTCTTGTAAATCTAATAAAACTTTTTTGAAATGCACAAAA
>XM_021611996.2
TATCTTCCCCTTCAATGTGCGCAAATTTGTTCCAGGCAGACGGTGGGGATTTTATAACTGTCGCATGAGCTCTCTGTAATTGGAGTAGCTAGTTGGTGTGCGTTTGTGTAATCTAATTTATCTAGTTTCTCAGACTGTACATTCAACATGGGGACAGAGCATGTGGGGAATGATGTCGTTTCTAAAGAGAACTTCCAGCCATGTGCCGAAGACATACAGAGGTGGATGGCTAATGCCTTTGACATGGCAAAAGAAGCCTTGGAGAATGGTGAGGTGCCTgttggatgtctcatggtctacAACAATGAGATTCTTGGAAAAGGGAGAAATGAAGTGAATGAAACAAAAAATgCCACTCGCCATGCTGAGATGGTGGCTCTGGACCAGGTGCTGGAGTGGTGTCGTCATAGAGACCTGGACCCCAGGACAGTGTGTGAGAGGACTGTGCTCTACGTGACTGTGGAGCCTTGCATCATGTGTGCAGGAGCTCTTCGCCTGACCAACATTCCTCTAGTGGTCTATGGGTGTAATAATGACAGGTTTGGTGGCTGTGGATCTGTTCTAGACATTCCCTCGGCTGATCTACCTCACACTGGCTCATCATTTAAGTGTATCTCTGGCTTCAGAGCAGAGGAAGCAGTGGAGATGCTGAAGACTTTTTATAAACAGGAGAACCCTAATGCTCCCAAGCCGAAGACGAGGAAAGAGTGATATTTTGTTGGTGTCCAGCAGGGGGCTCTAGACTTTAAGAAATGAGAATGTGATCTCACTCCGAGCACCCTGGGTCTAGGATGAGCTGAGCTTAAGGCAGGTACCGGGGGCCCCTCAGCAACCTCTaaaggagctctctctctctctggcgtcAGTCATCAACTGCCGTCATGGATCTGAAATCAGTGTTGCCCCCCGAGGCCATTTCCCACTCCAATGTATCATGTCTGTGATAGTTTCTGGGTTTGTTATGCATGTCTTGGATTGTTAAGTACTGGCGTCGTCATGTACAATAGGATGGTGGGGTTCTCTACTTTGAAAATGTTGTGATTACTAAGTGGCATAGCTGctttgtgatttatttattttctgctgAAGAACAAATACATATTCACAGCATTAGTCTCAGCGGGAGAAGGAACACTGAATAGTATAATAGACTGGGAGCGCCCATGCAGACAGTCCTGTCTCTCCTACTGAATGACTAGGCCAGACTTCACTGCAGAGGGACCATATTTCAATGTGGGACCAACTTATTTCAGATCAGAAAGGAGACAAATGTCCGTTCCATCGTCTCCCGCAGGTATTTTGATCTCAGTCTCAGTAACCACCAACACTCACACCAGCACTGCAGTTTGGTGTGTGACAAACGGAATGTGTTTGTAGCGTAGAGCACAGCTGTGAGGGGTAATAGTCAGTCTGAAGCGCCTCCCCTTCACATAGCAGCAGGCCGGCAGCATCCCTCAGCCTTAAACCCTTAGTGGTCTCTTCCCTGGACAGGATCAGGAACAGAGGAAGTAACCGCCCAGTCAGCATCAGACAGTTCCGGTTGTACCAGCTCCAAGTGACTGCtccacactgacctgctgtagcTTTCACTATTGTTTAAAACTCTCTCTTGTAAATCTAATAAAACTTTTTTGAAATGCACAAAA
>XM_021611997.2
TATCTTCCCCTTCAATGTGCGCAAATTTGTTCCAGGCAGACGGTGGGGATTTTATAACTGTCGCATGAGCTCTCTGTAATTGGAGTAGCTAGTTGGTGTGCGTTTGTGTAATCTAATTTATCTAGTTTCTCAGACTGTACATTCAACATGGGGACAGAGCATGTGGGGAATGATGTCGTTTCTAAAGAGAACTTCCAGCCATGTGCCGAAGACATACAGAGGTGGATGGCTAATGCCTTTGACATGGCAAAAGAAGCCTTGGAGAATGGTGAGGTGCCTgttggatgtctcatggtctacAACAATGAGATTCTTGGAAAAGGGAGAAATGAAGTGAATGAAACAAAAAATgCCACTCGCCATGCTGAGATGGTGGCTCTGGACCAGGTGCTGGAGTGGTGTCGTCATAGAGACCTGGACCCCAGGACAGTGTGTGAGAGGACTGTGCTCTACGTGACTGTGGAGCCTTGCATCATGTGTGCAGGAGCTCTTCGCCTGACCAACATTCCTCTAGTGGTCTATGGGTGTAATAATGACAGGTTTGGTGGCTGTGGATCTGTTCTAGACATTCCCTCGGCTGATCTACCTCACACTGGCTCATCATTTAAGTGTATCTCTGGCTTCAGAGCAGAGGAAGCAGTGGAGATGCTGAAGACTTTTTATAAACAGGAGAACCCTAATGCTCCCAAGCCGAAGACGAGGAAAGAGTGATATTTTGTTGGTGTCCAGCAGGGGGCTCTAGACTTTAAGAAATGAGGATCAGGAACAGAGGAAGTAACCGCCCAGTCAGCATCAGACAGTTCCGGTTGTACCAGCTCCAAGTGACTGCtccacactgacctgctgtagcTTTCACTATTGTTTAAAACTCTCTCTTGTAAATCTAATAAAACTTTTTTGAAATGCA
>XM_021611998.2
TATCTTCCCCTTCAATGTGCGCAAATTTGTTCCAGGCAGACGGTGGGGATTTTATAACTGTCGCATGAGCTCTCTGTAATTGGAGTAGCTAGTTGGTGTGCGTTTGTGTAATCTAATTTATCTAGTTTCTCAGACTGTACATTCAACATGGGGACAGAGCATGTGGGGAATGATGTCGTTTCTAAAGAGAACTTCCAGCCATGTGCCGAAGACATACAGAGGTGGATGGCTAATGCCTTTGACATGGCAAAAGAAGCCTTGGAGAATGGTGAGGTGCCTgttggatgtctcatggtctacAACAATGAGATTCTTGGAAAAGGGAGAAATGAAGTGAATGAAACAAAAAATgCCACTCGCCATGCTGAGATGGTGGCTCTGGACCAGGTGCTGGAGTGGTGTCGTCATAGAGACCTGGACCCCAGGACAGTGTGTGAGAGGACTGTGCTCTACGTGACTGTGGAGCCTTGCATCATGTGTGCAGGAGCTCTTCGCCTGACCAACATTCCTCTAGTGGTCTATGGGTGTAATAATGACAGGTTTGGTGGCTGTGGATCTGTTCTAGACATTCCCTCGGCTGATCTACCTCACACTGGCTCATCATTTAAGTGTATCTCTGGCTTCAGAGCAGAGGAAGCAGTGGAGATGCTGAAGACTTTTTATAAACAGGAGAACCCTAATGCTCCCAAGCCGAAGACGAGGAAAGAGTGATATTTTGTTGGTGTCCAGCAGGGGGCTCTAGACTTTAAGAAATGAGTGGTCTCTTCCCTGGACAGGATCAGGAACAGAGGAAGTAACCGCCCAGTCAGCATCAGACAGTTCCGGTTGTACCAGCTCCAAGTGACTGCtccacactgacctgctgtagcTTTCACTATTGTTTAAAACTCTCTCTTGTAAATCTAATAAAACTTTTTTGAAATGCA
>XR_005052838.1
TATCTTCCCCTTCAATGTGCGCAAATTTGTTCCAGGCAGACGGTGGGGATTTTATAACTGTCGCATGAGCTCTCTGTAATTGGAGTAGCTAGTTGGTGTGCGTTTGTGTAATCTAATTTATCTAGTTTCTCAGACTGTACATTCAACATGGGGACAGAGCATGTGGGGAATGATGTCGTTTCTAAAGAGAACTTCCAGCCATGTGCCGAAGACATACAGAGGTGGATGGCTAATGCCTTTGACATGGCAAAAGAAGCCTTGGAGAATGGTGAGGTGCCTgttggatgtctcatggtctacAACAATGAGATTCTTGGAAAAGGGAGAAATGAAGTGAATGAAACAAAAAATgCCACTCGCCATGCTGAGATGGTGGCTCTGGACCAGGTGCTGGAGTGGTGTCGTCATAGAGACCTGGACCCCAGGACAGTGTGTGAGAGGACTGTGCTCTACGTGACTGTGGAGCCTTGCATCATGTGTGCAGGAGCTCTTCGCCTGACCAACATTCCTCTAGTGGTCTATGGGTGTAATAATGACAGGTTTGGTGGCTGTGGATCTGTTCTAGACATTCCCTCGGCTGATCTACCTCACACTGGCTCATCATTTAAGTGTATCTCTGGCTTCAGAGCAGAGGAAGCAGTGGAGATGCTGAAGACTTTTTATAAACAGGAGAACCCTAATGCTCCCAAGCCGAAGACGAGGAAAGAGTGATATTTTGTTGGTGTCCAGCAGGGGGCTCTAGACTTTAAGAAATGAGAATGTGATCTCACTCCGAGCACCCTGGGTCTAGGATGAGCTGAGCTTAAGGATCAGGAACAGAGGAAGTAACCGCCCAGTCAGCATCAGACAGTTCCGGTTGTACCAGCTCCAAGTGACTGCtccacactgacctgctgtagcTTTCACTATTGTTTAAAACTCTCTCTTGTAAATCTAATAAAACTTTTTTGAAATGCA

Function

symbol description
adat2 Predicted to enable tRNA-specific adenosine-34 deaminase activity. Predicted to be involved in tRNA wobble adenosine to inosine editing. Predicted to act upstream of or within tRNA processing. Orthologous to human ADAT2 (adenosine deaminase tRNA specific 2).

NR:

description
tRNA-specific adenosine deaminase 2 isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K15441 TAD2, ADAT2; tRNA-specific adenosine deaminase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611995.2 False 2039 mRNA 0.46 6 23146458 23151249
XM_021611996.2 False 1646 mRNA 0.47 7 23146458 23151249
XM_021611997.2 False 907 mRNA 0.46 7 23146463 23151249
XM_021611998.2 False 926 mRNA 0.47 7 23146463 23151249
XR_005052838.1 True 957 mRNA 0.47 8 23146463 23151249

Neighbor

gene id symbol gene type direction distance location
hivep2a LOC106571417 coding downstream 79506 22970089 ~ 23066952 (-)
si:ch211-202p1.5 LOC106571542 coding downstream 196387 22929691 ~ 22950071 (-)
nmbr LOC106571412 coding downstream 342797 22789862 ~ 22803661 (-)
cited2 LOC106571411 coding downstream 568946 22575120 ~ 22577512 (-)
txlnba LOC100194672 coding downstream 584129 22533156 ~ 22562329 (-)
batf3 LOC106571544 coding upstream 41315 23192564 ~ 23198250 (-)
nsl1 nsl1 coding upstream 48262 23199511 ~ 23202233 (-)
angel2 angel2 coding upstream 102338 23253587 ~ 23259122 (-)
galnt14 LOC106571428 coding upstream 108939 23260188 ~ 23365791 (-)
LOC110529641 LOC106571433 coding upstream 376381 23527630 ~ 23582982 (-)
G687007 NA non-coding downstream 2033 23142386 ~ 23144425 (-)
G686951 NA non-coding downstream 116952 23028240 ~ 23029506 (-)
G686943 NA non-coding downstream 135891 23005517 ~ 23010567 (-)
G686913 NA non-coding downstream 205975 22940030 ~ 22940483 (-)
G686912 NA non-coding downstream 206697 22939470 ~ 22939761 (-)
G687016 NA non-coding upstream 5640 23156889 ~ 23157099 (-)
G687017 NA non-coding upstream 5949 23157198 ~ 23157609 (-)
G687031 NA non-coding upstream 13521 23164770 ~ 23165125 (-)
G687034 NA non-coding upstream 22722 23173971 ~ 23174316 (-)
G687041 NA non-coding upstream 34909 23186158 ~ 23186391 (-)
G685953 NA other downstream 985416 22159030 ~ 22161042 (-)
LOC110529207 sprtn other downstream 1221550 21920427 ~ 21926307 (-)
G684844 NA other downstream 1667255 21478766 ~ 21479203 (-)
G681659 NA other downstream 4354321 18791230 ~ 18792137 (-)
G679471 NA other downstream 6031930 17113543 ~ 17114528 (-)
LOC110529643 LOC106571435 other upstream 465658 23614938 ~ 23659111 (-)
G687890 NA other upstream 484060 23635309 ~ 23637408 (-)
G687979 LOC106571438 other upstream 603583 23754832 ~ 23756910 (-)
G688109 NA other upstream 836850 23988099 ~ 23988854 (-)
G688366 NA other upstream 1273814 24425063 ~ 24425553 (-)

Expression


Co-expression Network