pex3 (pex3)


Basic Information

Item Value
gene id pex3
gene name pex3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23151281 ~ 23155668 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611992.2
GCAGATGATCGCAGAAACACTGATCAATCGATGTTGCTTTGCGCAGCTTCCCACCTCCGTGTTTGACATGTAGCTAGCGTTCAAATTCGTGTCATGTGCGACTGTGGAAAATAACACGGTTGGGTGCTTTGTTTCTTCTGTTTTATAAGTCGTCTCAAAAATGTTTTCGTCTACGTGGAATTTTCTGAAGCGCCACAAAAGGAAATTTATTTTCGCTGGAGCTTTTGTCggagGTGTGTACTTTCTTGGTAAATATGCTCAAAAGAAAATCCGAGAGATGCAGGAGCGTGAGGCATCAGAGTACATCGCTCAAGCCCGACGTCAGTTCCACTTCGAGAGTAACCAGAGAACGTGCAACATGACAGtgttGTCAATGCTCCCTACATTAAGAGAAGCCATTTTACATCATCTAAACTCTGAGAGCCTCACTACACTGCTGAAGAGCAAACCAGCAAATAAACTTGACATATGGGAGGACCTGAAGATTATTAGTTTCACCCGAAGTGTTGTGGCtgtgtacagtacatgtatgttGGTTGTTTTACTCCGTGTCCAGCTCAATATCATTGGTGGCTACTTATACTTGGACAACTCTGTCAGCAAGAGTGGCATGATGCCCTTGGCCCCTCCAGATGTGCAACAACAATACCTCTCCAGCATCCAGCACCTCCTTGGGGATGGGTTGAGTGAGATGATAACAGCGGTTAAGAAAGCTGTGCAGAACACATTGGGCGGggTGTCCCTGAAGCAGAGTCTGTCCCTTCAGGAGTTGGAGCAGCACCTTAACCAGATCAGAGCccaggtggaggagggagatgggggcTCCACACACAGACCTCTCTCCTGGTACATGATGCCTGACGAGGAGAACACTCTGGCTGCACAGGCCTGTGGTCTGACGGAGAATGATGTCACTACAATAAAGCTGCTCAATGAAACCAGAGACATGCTTGAAAGCCCGGACTTCGGCACTGTACTCAACACCTGCCTGAACAGGGGCTTCAACCGTTTCCTTGACAACATGGCAGAGTTTTTCCGGCCCCCACCCGGAGCACAAGGAGACTCCACCCCCATCACTACACCTGATAGtctctcgcATGTAAGTCTCCCAGTTGCCAAAATCATCCCCATTGTGAATGGACAGATCCACTCCATCTGCAGTGAAATACCAAGTCACTTTGTACAGGATCTCCTGATGATAGACCAAGTGAAGGAGTTTGCTGCCAATGTGTATGAGACATTCAGCACATCCCATGAACTGCAGAAATAAGGGAGTTGACATATTCCTGGTAGACCTGGCCCGCTCTTCCTGCTCTGTATCTTTGCATGACGCTGCCTGCTGTGGACATCACGAATGGAGGAAGAAATGCTCTTATTCGCTGTACCATGTCAGAATACTTGAGGACTGTTCCATTGTGGAATGTAATGCCATGAACTGCCGCCTACTCCAGCTGTAGACCTCAAGGTGAGATACCCACTTCATCTTGGGAAGTTGAGTTTTTGGCTCACGGTTTATAAAGTCAGCCAGCCAGACTCCTCTGAATCAAAGTAACTTTCCTGTgtcatgaaaaataaataaaatcctgAAAGCCTTGTCCCACTTTACGTAGACGTTGTTTCGATACATTAACCATAAGTTGAACTGTCACTTTGAGTTTGAACTATTTCCTCCTTTCTATTACTGTTGTTGAAGAGTCAACCTTCCATTTTGACCTTTAATCTACCAATATCAACAGTGCTGTGTCATCAAGGCAGCAAGTTCTCATTAAACCTCAGTCTAATTCCTGTTTAACAATGTTCAGTATTGTCTAATACATCATTCTGCACTTTTTATGTTGTCTCTTCTTTGGAAATGTAATCTTTAAGGTTTGTTTTCTTAAATCATGGAAATTGGGAAATTTCAGAGGTGAGAATGTAGGCCTATGTATTATATATTTTGTAACATAACATTCTAAATGACAACAGAAAATGTAAGTACTGTAGTGTTGACATTGCAAATTATAAACACATGATTTAATATA

Function

symbol description
pex3 Predicted to enable protein-macromolecule adaptor activity. Predicted to be involved in protein import into peroxisome membrane. Predicted to act upstream of or within peroxisome organization. Predicted to be integral component of peroxisomal membrane. Human ortholog(s) of this gene implicated in peroxisomal biogenesis disorder and peroxisome biogenesis disorder 10A. Orthologous to human PEX3 (peroxisomal biogenesis factor 3).

NR:

description
peroxisomal biogenesis factor 3

GO:

id name namespace
GO:0007031 peroxisome organization biological_process
GO:0005779 integral component of peroxisomal membrane cellular_component

KEGG:

id description
K13336 PEX3; peroxin-3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611992.2 True 2021 mRNA 0.44 12 23151281 23155668

Neighbor

gene id symbol gene type direction distance location
aig1 LOC106571419 coding upstream 6744 23076384 ~ 23144537 (+)
adgrg6 LOC106571415 coding upstream 235627 22860014 ~ 22915654 (+)
vta1 LOC106571414 coding upstream 293992 22809882 ~ 22857289 (+)
gje1 LOC106571413 coding upstream 341732 22804904 ~ 22809549 (+)
LOC110529619 hdc coding upstream 639252 22506844 ~ 22512029 (+)
atf3 atf3 coding downstream 21970 23177638 ~ 23181382 (+)
tatdn3 tatdn3 coding downstream 46576 23202244 ~ 23208093 (+)
flvcr1 flvcr1 coding downstream 53560 23209228 ~ 23220811 (+)
vash2 vash2 coding downstream 65861 23221529 ~ 23249786 (+)
LOC110529639 LOC106571429 coding downstream 212641 23368309 ~ 23405523 (+)
G686555 NA non-coding upstream 3560 23146490 ~ 23147721 (+)
G686448 LOC106571417 non-coding upstream 180159 22946501 ~ 22972836 (+)
G686447 NA non-coding upstream 207827 22943126 ~ 22943454 (+)
G686446 NA non-coding upstream 210771 22940250 ~ 22940510 (+)
G686444 NA non-coding upstream 213909 22937172 ~ 22937372 (+)
G686556 NA non-coding downstream 4238 23159906 ~ 23160262 (+)
G686557 NA non-coding downstream 5645 23161313 ~ 23161518 (+)
G686558 NA non-coding downstream 5896 23161564 ~ 23162164 (+)
G686560 NA non-coding downstream 10418 23166086 ~ 23167648 (+)
G686568 NA non-coding downstream 34247 23189915 ~ 23190117 (+)
G685551 NA other upstream 669142 22480323 ~ 22482139 (+)
G685469 NA other upstream 703208 22446771 ~ 22448073 (+)
LOC110529616 LOC106586086 other upstream 718246 22419790 ~ 22433035 (+)
G685311 NA other upstream 1067057 22083874 ~ 22084224 (+)
LOC110529640 LOC106571431 other downstream 328764 23484408 ~ 23524035 (+)
LOC110529210 ift172 other downstream 828777 23961761 ~ 23991295 (+)
G688613 NA other downstream 1827061 24982729 ~ 24984826 (+)
G688823 NA other downstream 1903285 25058953 ~ 25061450 (+)
LOC110529690 LOC106571476 other downstream 2522984 25678604 ~ 25685894 (+)

Expression


Co-expression Network