galnt14 (LOC106571428)


Basic Information

Item Value
gene id galnt14
gene name LOC106571428
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23260188 ~ 23365791 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612019.2
AAACTGGACGGCATCAAGTGTCGTACCTCGTAGCTCCAGCGAGTCATAGCGCACAGCTTAGCTATCAGTTCGGTCATAGAGAATCTCGCAACCAGGGCAGTCATTGTGCACGCGTCTGGAGCAAGCGGACGTGCAGCGTTCGAAAAGAGAACCAGAGAATGAGGGTAGAGCGCAAAAGCACGTCTCCAGAACCTACTTTCCTAGAAATGTGCTTCTCGTAGGTTGCCCCGCCAATAAAGGGGCGATATCTGCTCCAGGAACTCATAGGAAAATGAAACGGCTTTCTCGAAAACTGACTTTGGCTCTGGTGGTGCTTTGTTGGACTGCTGCACTACTGTATTTGATACTCCTAAGTAGGCAGCAAGTATCAGACCTGGGCACCAAAGACGCACAGTACAGACAGATCTCGGAGGCAGAATGGGACGACCTCCTGGAAGAGTTTGAAGAGAAGAACTACCTTAACGCCAGGCGATGGAAACCAGGACAGGACCCTTACAAACTGTATGCCTTCAaccaaagagagagtgagaggatacCCAGCAACAGAGTTCTCAGAGACACACGACATTACAGatGCACCACATTGCATTATAACCCAGATCTGCCCTCCACCTCCATCGTCATCACTTTCCACAACGAGGCCCGCTCCACTCTGCTACGGACCATCAGGAGTGTGCTGAACAGGACGCCAGTCCACCTGATTCACGAGATCATCCTGGTAGATGACTACAGTGGGGATGCAAATGACTGCCTTCTACTCACCAAGTTGCCCAAAGTAAAGTGTCTTCGGAATGACAGGAGAGAAGgtctgaTCCGCTCCAGGGTACGTGGGGCAGATGCAGCGAAGGCTGGGGTCCTGACCTTCCTGGACAGTCACTGTGAGGTCAACAAGGACTGGCTGCCCCCACTGCTCCGGAGGATCAAGGagGACCCGACCTGTGTGGTGAGCCCAGTGATCGACATCATCAACATGGATACCTTCGCCTACGTAGCAGCTTCCTCTGACCTCCGTGGAGgctTCGACTGGAGTCTACATTTCAAGTGGGAACAGTTGTCTGCTGAGCAGAAAGCCAGGAGAGCTGACCCCACCGAACCCATTAAGACTCCCATCATTGCCGGAGGGCTGTTTGTGATTGACAAGGTGTGGTTCAACCACCTGGGGAAGTATGACACAGCCATGGACATCTGGGGCGGGGAGAACTTTGAGATCTCGTTCCGGGTGTGGATGTGTGGAGGGAGCCTAGAGATTCTCCCCTGCAGCAGGGTCGGCCACGTCTTCCGCAAGAAACACCCCTACATCTTCCCTGAGGGCAACGCCAACACCTACATCAAGAACACCAGACGGACGGCGGAGGTGTGGATGGATGAGTTCAAGCTCTTCTACTACTCTGCTCGCCCTGCAGCACGGGGCAAGTCCTACGGAGAcATTCATAGCAGGGAAGAGCTCCGCAAGAGTCTCAAGTGCAAATCCTTCAAGTGGTATCTGGACAACGTCTACCCAGAGCtcaaAGTGCCAGATGATTCGGACTCCAAGTCAGGGGTGATTCGTCAAAGACAGAATTGTCTGGAGTCCCGTAGGGTGGAGGGACAgaacctctcctctctcacactaGCACCCTGCATCGGAACAAAAGCTGTGTCAGCACTCAACCAGGAGTGGATTTACACCCACGGGCAGCAGATCCGTCAGCAGCagcactgcctctctctctccaccaccttCCCTGCCTCCCAGGTCATGCTCATGCCCTGCAACATCAGCGACGGGAAACAACGATGGCAGAAGTCAGGCACCCACCTGGAGCACCTGGTCTCCCACTTCTGCCTGGACAGTGAGATGGCCCTGGAAGGCATCGAGAGCAGCAAGATGCTGGTGATCAGCCCCTGTGAACTGACAGCCTACACCCAGAGATGGGAGATGCCCTTCTCATGATCCATCCACAACACAAGCCTTCCTGTAGAGGAGGACTACCCTACGAGCACTCACGACCTACTGCAGTGCTTACTGTAGCCAAGAGCTtttagaaagagatggaggaggttGGACACCGGCGTAAAGGGTATTTTTGGTCACTGAGATTAGTCTTTATAAGATGGCATGGACTTGGACTGACGTCAGCACATTCAATTGTTCAACAAGACACTCAgcagcagtggtggaaaatgtactcaattgtcatacttcagtaaaagtaaagaagaaagagaaaatgactcaaataaaagtgaaagtcacccagtgaaatactacttgagtaaaagtctaaaagca

Function

NR:

description
polypeptide N-acetylgalactosaminyltransferase 14-like

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG:

id description
K00710 GALNT; polypeptide N-acetylgalactosaminyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612019.2 True 2272 mRNA 0.52 15 23260188 23365791

Neighbor

gene id symbol gene type direction distance location
angel2 angel2 coding downstream 1066 23253587 ~ 23259122 (-)
nsl1 nsl1 coding downstream 57955 23199511 ~ 23202233 (-)
batf3 LOC106571544 coding downstream 61938 23192564 ~ 23198250 (-)
adat2 adat2 coding downstream 108939 23146458 ~ 23151249 (-)
hivep2a LOC106571417 coding downstream 193236 22970089 ~ 23066952 (-)
LOC110529641 LOC106571433 coding upstream 161839 23527630 ~ 23582982 (-)
LOC110529643 LOC106571435 coding upstream 249147 23614938 ~ 23659111 (-)
LOC110529644 NA coding upstream 313040 23678831 ~ 23682862 (-)
LOC110529645 NA coding upstream 328670 23694461 ~ 23732156 (-)
LOC110531080 LOC106571440 coding upstream 426208 23791999 ~ 23805391 (-)
G687075 NA non-coding downstream 10448 23245556 ~ 23249740 (-)
G687024 NA non-coding downstream 51373 23207872 ~ 23208815 (-)
G687044 NA non-coding downstream 70970 23189015 ~ 23189218 (-)
G687041 NA non-coding downstream 73797 23186158 ~ 23186391 (-)
G687034 NA non-coding downstream 85872 23173971 ~ 23174316 (-)
G687137 NA non-coding upstream 2563 23368354 ~ 23369103 (-)
G687135 LOC106571429 non-coding upstream 37510 23403301 ~ 23405523 (-)
G687155 NA non-coding upstream 55875 23421666 ~ 23422179 (-)
G687174 NA non-coding upstream 84790 23450581 ~ 23450931 (-)
G687184 NA non-coding upstream 97754 23463545 ~ 23463755 (-)
G685953 NA other downstream 1099146 22159030 ~ 22161042 (-)
LOC110529207 sprtn other downstream 1335280 21920427 ~ 21926307 (-)
G684844 NA other downstream 1780985 21478766 ~ 21479203 (-)
G681659 NA other downstream 4468051 18791230 ~ 18792137 (-)
G679471 NA other downstream 6145660 17113543 ~ 17114528 (-)
G687890 NA other upstream 269518 23635309 ~ 23637408 (-)
G687979 LOC106571438 other upstream 389041 23754832 ~ 23756910 (-)
G688109 NA other upstream 622308 23988099 ~ 23988854 (-)
G688366 NA other upstream 1059272 24425063 ~ 24425553 (-)

Expression


Co-expression Network