Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965656 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 23945776 ~ 23945903 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118965656 | True | 128 | mRNA | 0.49 | 1 | 23945776 | 23945903 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529650 | LOC106571443 | coding | downstream | 16968 | 23910501 ~ 23928808 (-) |
| trim54 | LOC106571441 | coding | downstream | 37256 | 23883070 ~ 23908520 (-) |
| LOC110531080 | LOC106571440 | coding | downstream | 140385 | 23791999 ~ 23805391 (-) |
| LOC110529645 | NA | coding | downstream | 213620 | 23694461 ~ 23732156 (-) |
| LOC110529644 | NA | coding | downstream | 262914 | 23678831 ~ 23682862 (-) |
| si:dkey-221h15.4 | LOC106571445 | coding | upstream | 6807 | 23952710 ~ 23955758 (-) |
| LOC110529653 | rcan2 | coding | upstream | 179855 | 24125758 ~ 24243880 (-) |
| LOC110529654 | NA | coding | upstream | 337488 | 24283391 ~ 24290109 (-) |
| ncoa1 | LOC106571447 | coding | upstream | 352039 | 24297942 ~ 24397937 (-) |
| LOC118965504 | NA | coding | upstream | 459008 | 24404911 ~ 24411834 (-) |
| G688000 | NA | non-coding | downstream | 102672 | 23789230 ~ 23843104 (-) |
| G688024 | NA | non-coding | downstream | 122319 | 23822905 ~ 23823457 (-) |
| G687973 | NA | non-coding | downstream | 199055 | 23746445 ~ 23746721 (-) |
| G687971 | NA | non-coding | downstream | 200658 | 23744895 ~ 23745118 (-) |
| G687970 | NA | non-coding | downstream | 201002 | 23744573 ~ 23744774 (-) |
| G688167 | NA | non-coding | upstream | 138157 | 24084060 ~ 24116642 (-) |
| G688191 | NA | non-coding | upstream | 171637 | 24117540 ~ 24117785 (-) |
| G688192 | NA | non-coding | upstream | 172310 | 24118213 ~ 24118420 (-) |
| G688338 | rpl7l1 | non-coding | upstream | 433400 | 24379303 ~ 24401141 (-) |
| G688369 | NA | non-coding | upstream | 483974 | 24429877 ~ 24434825 (-) |
| G687979 | LOC106571438 | other | downstream | 188866 | 23754832 ~ 23756910 (-) |
| G687890 | NA | other | downstream | 308368 | 23635309 ~ 23637408 (-) |
| LOC110529643 | LOC106571435 | other | downstream | 324530 | 23614938 ~ 23659111 (-) |
| G685953 | NA | other | downstream | 1784734 | 22159030 ~ 22161042 (-) |
| LOC110529207 | sprtn | other | downstream | 2020868 | 21920427 ~ 21926307 (-) |
| G688109 | NA | other | upstream | 42196 | 23988099 ~ 23988854 (-) |
| G688366 | NA | other | upstream | 479160 | 24425063 ~ 24425553 (-) |
| LOC110529658 | LOC106571450 | other | upstream | 493062 | 24438965 ~ 24446940 (-) |
| G688480 | LOC106571453 | other | upstream | 683651 | 24629554 ~ 24631049 (-) |
| G688537 | NA | other | upstream | 735064 | 24680967 ~ 24681426 (-) |
