LOC110529686 (pura1)


Basic Information

Item Value
gene id LOC110529686
gene name pura1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 25587443 ~ 25600542 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036985169.1
ACTAGCGCTCAGAGAATGATTAGGCCTACACTATATGAATTGTCATTGGCTCTCGCTTTCGTGGTAGTCTTGACCAACGGATAAGGGTCTGACGGTAAATATAGACACGAGGTCATGTGCAGTCTAGACTACGGTTGGTGTACCCCCTCTTAATCAGGCGGCAAACCCGTTTTTGGTTAGACCGAATTCTTCTTGAGCACTGAGGGGACATTTTTCTCATCACATACGAGTTGTCATTTTACTGCGAGCTGTGCGCTGGCGTAGGATAAATATGTCTCACAAAAGTTGTTATACAAACCCTGGCACAGGGGGGAAGCGACCTCGAAACGACAAGGGGAACAAGGTGACAGTTGTACTTGGTGCACAATGGGGCGATGAAGGGAAGGGGAAAGTGGTCGATTTGTTGGCGACAGAGTCGGACATCATTTGCAGATGCCAGGGCGGTAACAACGCAGGTCACACGGTGGTGGTGGATGGGAAGGAATATGACTTCCACCTCCTCCCCAGTGGGATCATCAACTCCAAAGCTGTTTCTGTGATCGgcAATGGTGTGGTCATTCATCTGCCAGGCTTGTTAGAAGAAGcggaaaaaaatgaaaagaaagGCCTTAAAGACTGGGAGAAGAGACTGATCATATCAGACAGGGCCCACATTGTGTTTGACTTCCACCAGGCAGTCGACGGGCTCCAGGAGGTACAGAGACAAGCACAGGACGGGATAAATATTGGAACCACAAAGAAAGGCATCGGACCAACCTACTCTAGCAAAGCGTCACGTACTGGGCTGCGTATCTGTGACCTCCTAGATGATTTCAAAGACTTTTCTACGAGGTTCAAGAACCTTGCTCAGCAGTACCAGGCCATGTTCCCCACACTGGTGGTAGATGTTGACGGTCAGCTGAACAAATTAAAGGAGTATGCTGAGCGGATAAGACCCATGGTGCGAGACGGTGTCTATTTCATGTACGACGCTATTAATGGACCCCCTAAGAAGATACTGGTGGAGGGCGCGAACGCTGCCCTGCTTGACATTGACTTTGGTACATACCCATTTGTGACATCATCAAACTGCACCGTGGGTGGTGTGTGTACAGGACTGGGCATCCCCCCTCTGAACATTGGTGATGTGTACGGGGTGGTGAAGGCCTACACCACTAGGGTGGGCATCGGGGCGTTCCCCACTGAACAACTCAATGAGGTTGGGGAGCTGCTGCAGACGCGGGGCCATGAGGTGGGCGTGACCACAGGGAGGAAACGACGCTGTGGTTGGCTGGATCTGGTCATCCTGCGTTACGCCAATATGATAAACGGCTTCACGGCGTTTGCATTAACCAAACTTGATATCCTTGATGTGATGGATGAAATCAAAGTGGGAGTGTCTTATAAACTCAAGGGCAAAAAGATTCCCTATTTTCCAGCTAACATGGACGTCCTGCAGAAAGTGGAGGTAGAGTACGAGAAACTGCCTGGCTGGAAGAGTGACACCTCAGCCTGTAGGAAGTGGGAAGATCTGCCAGGCAAAGCCCAGAACTACATTCGCTTTGTGGAGAACCACGTTGGTGTACCCATCAAATGGGTTGGAGTGGGCAAGGGCAGGGAGTCTATGATCCAGACGTTCTAGGACACAACAAGACCTTTGTCCTTATTCTCTCCATGAAGgGGCTGCAGCAGCTGCACAGACCCCAACTCCTGGACTAACAAACAGGTTCAAATGAGAGTTTGTGCAACCACCATGCTCTACTATACATGGTTCAAAAAGCACAATAACGTGAGCAAATAATAGTTATATTGATTGTGTCACAGTAGTTCTTCTCTGTTGCAATTTACAAACCATAAAATTGTCTTAGGTGAGTTCAAATAGACTTGTTTCTGTTCCAATTACGTTCTTTGCACTGATCCAGCATTTTCGTCTTTTGTTGAATAttgttttgatttgatattgCCGTCATGTCAGCTAACCTACGTTGTTTAGACTTGAATTAACATTGGCCAGTATCTGCTGTCTAATATAGTACTTGCATGCTAGAACTACAGCTGATATGTCAAACTATTTTGAACAATGCAATGTGCAATGGCCAGAATGAGGTAGTTGTATGACATGTTGTTGTCAAGGTGGAAGTCATGTGTCCTGATACTTGTCCATTAACTGCAATACTGTATTTTGCTGTCCACACTATGTTGAAAAATCCCAGGGAACTTGTTATTTGCTTATGTGACACATTTGGTTATATAAAACAAATGTATTGTTGTAGCAATTAGAGCTCGTTTTCTATGGATTTTTCTGCCAGTCAAATTGATTTTTTCCCAGTAATAGTATGTCCCCCCCCCCATTGACACTGTACTGTAACAGCTAAGAAAATAACACTGTGATACCTAAGAAGTTTTCTAGTGCAAGACTTTTACAAGTGGAAATCTGATATGCAAATAAATCTGCTACATCACA
>XM_021612123.2
CTAGCGCTCAGAGAATGATTAGGCCTACACTATATGAATTGTCATTGGCTCTCGCTTTCGTGGTAGTCTTGACCAACGGATAAGGGTCTGACGGTAAATATAGACACGAGGTCATGTGCAGTCTAGACTACGGTTGGTGTACCCCCTCTTAATCAGGCGGCAAACCCGTTTTTGGTTAGACCGAATTCTTCTTGAGCACTGAGGGGACATTTTTCTCATCACATACGAGTTGTCATTTTACTGCGAGCTGTGCGCTGGCGTAGGATAAATATGTCTCACAAAAGTTGTTATACAAACCCTGGCACAGGGGGGAAGCGACCTCGAAACGACAAGGGGAACAAGGTGACAGTTGTACTTGGTGCACAATGGGGCGATGAAGGGAAGGGGAAAGTGGTCGATTTGTTGGCGACAGAGTCGGACATCATTTGCAGATGCCAGGGCGGTAACAACGCAGGTCACACGGTGGTGGTGGATGGGAAGGAATATGACTTCCACCTCCTCCCCAGTGGGATCATCAACTCCAAAGCTGTTTCTGTGATCGgcAATGGTGTGGTCATTCATCTGCCAGGCTTGTTAGAAGAAGcggaaaaaaatgaaaagaaagGCCTTAAAGACTGGGAGAAGAGACTGATCATATCAGACAGGGCCCACATTGTGTTTGACTTCCACCAGGCAGTCGACGGGCTCCAGGAGGTACAGAGACAAGCACAGGACGGGATAAATATTGGAACCACAAAGAAAGGCATCGGACCAACCTACTCTAGCAAAGCGTCACGTACTGGGCTGCGTATCTGTGACCTCCTAGATGATTTCAAAGACTTTTCTACGAGGTTCAAGAACCTTGCTCAGCAGTACCAGGCCATGTTCCCCACACTGGTGGTAGATGTTGACGGTCAGCTGAACAAATTAAAGGAGTATGCTGAGCGGATAAGACCCATGGTGCGAGACGGTGTCTATTTCATGTACGACGCTATTAATGGACCCCCTAAGAAGATACTGGTGGAGGGCGCGAACGCTGCCCTGCTTGACATTGACTTTGGTACATACCCATTTGTGACATCATCAAACTGCACCGTGGGTGGTGTGTGTACAGGACTGGGCATCCCCCCTCTGAACATTGGTGATGTGTACGGGGTGGTGAAGGCCTACACCACTAGGGTGGGCATCGGGGCGTTCCCCACTGAACAACTCAATGAGGTTGGGGAGCTGCTGCAGACGCGGGGCCATGAGGTGGGCGTGACCACAGGGAGGAAACGACGCTGTGGTTGGCTGGATCTGGTCATCCTGCGTTACGCCAATATGATAAACGGCTTCACGGCGTTTGCATTAACCAAACTTGATATCCTTGATGTGATGGATGAAATCAAAGTGGGAGTGTCTTATAAACTCAAGGGCAAAAAGATTCCCTATTTTCCAGCTAACATGGACGTCCTGCAGAAAGTGGAGGTAGAGTACGAGAAACTGCCTGGCTGGAAGAGTGACACCTCAGCCTGTAGGAAGTGGGAAGATCTGCCAGGCAAAGCCCAGAACTACATTCGCTTTGTGGAGAACCACGTTGGTGTACCCATCAAATGGGTTGGAGTGGGCAAGGGCAGGGAGTCTATGATCCAGACGTTCTAGGACACAACAAGACCTTTGTCCTTATTCTCTCCATGAAGGTGAATTGAGGTGGTATGGCTTTATCTTCTCTGGTCAGATTTCTTctgttttgaaaatgtttttgttttttaaggGGCTGCAGCAGCTGCACAGACCCCAACTCCTGGACTAACAAACAGGTTCAAATGAGAGTTTGTGCAACCACCATGCTCTACTATACATGGTTCAAAAAGCACAATAACGTGAGCAAATAATAGTTATATTGATTGTGTCACAGTAGTTCTTCTCTGTTGCAATTTACAAACCATAAAATTGTCTTAGGTGAGTTCAAATAGACTTGTTTCTGTTCCAATTACGTTCTTTGCACTGATCCAGCATTTTCGTCTTTTGTTGAATAttgttttgatttgatattgCCGTCATGTCAGCTAACCTACGTTGTTTAGACTTGAATTAACATTGGCCAGTATCTGCTGTCTAATATAGTACTTGCATGCTAGAACTACAGCTGATATGTCAAACTATTTTGAACAATGCAATGTGCAATGGCCAGAATGAGGTAGTTGTATGACATGTTGTTGTCAAGGTGGAAGTCATGTGTCCTGATACTTGTCCATTAACTGCAATACTGTATTTTGCTGTCCACACTATGTTGAAAAATCCCAGGGAACTTGTTATTTGCTTATGTGACACATTTGGTTATATAAAACAAATGTATTGTTGTAGCAATTAGAGCTCGTTTTCTATGGATTTTTCTGCCAGTCAAATTGATTTTTTCCCAGTAATAGTATGTCCCCCCCCCCATTGACACTGTACTGTAACAGCTAAGAAAATAACACTGTGATACCTAAGAAGTTTTCTAGTGCAAGACTTTTACAAGTGGAAATCTGATATGCAAATAAATCTGCTACATCACA

Function

NR:

description
adenylosuccinate synthetase isozyme 1 A

GO:

id name namespace
GO:0044208 'de novo' AMP biosynthetic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0005525 GTP binding molecular_function
GO:0004019 adenylosuccinate synthase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K01939 purA, ADSS; adenylosuccinate synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036985169.1 False 2443 mRNA 0.46 14 25587443 25600542
XM_021612123.2 True 2516 mRNA 0.46 13 25587444 25600542

Neighbor

gene id symbol gene type direction distance location
LOC110529217 LOC106571473 coding upstream 141 25552437 ~ 25587302 (+)
LOC110529685 LOC106571472 coding upstream 56340 25527213 ~ 25531103 (+)
LOC110529684 rad51 coding upstream 66119 25517487 ~ 25521324 (+)
knl1 knl1 coding upstream 72241 25484214 ~ 25515202 (+)
tlr5m tlr5m coding upstream 180093 25399256 ~ 25407350 (+)
LOC110529687 LOC106571474 coding downstream 7398 25607940 ~ 25651987 (+)
LOC110529689 LOC106571475 coding downstream 52758 25653300 ~ 25676087 (+)
LOC110529690 LOC106571476 coding downstream 78062 25678604 ~ 25685894 (+)
LOC110529691 LOC106571477 coding downstream 93001 25693543 ~ 25733800 (+)
LOC110529695 nagab coding downstream 205359 25805901 ~ 25809907 (+)
G689397 LOC106581772 non-coding upstream 46039 25541173 ~ 25541404 (+)
G689396 NA non-coding upstream 46368 25540799 ~ 25541075 (+)
G689395 NA non-coding upstream 47797 25539344 ~ 25539646 (+)
G689393 NA non-coding upstream 52281 25534879 ~ 25535162 (+)
G689374 NA non-coding upstream 89105 25497597 ~ 25498338 (+)
G689490 NA non-coding downstream 112870 25713412 ~ 25713643 (+)
G689493 NA non-coding downstream 115090 25715632 ~ 25715857 (+)
G689502 NA non-coding downstream 135696 25736238 ~ 25736471 (+)
G688823 NA other upstream 525993 25058953 ~ 25061450 (+)
G688613 NA other upstream 602617 24982729 ~ 24984826 (+)
LOC110529210 ift172 other upstream 1596444 23961761 ~ 23991295 (+)
LOC110529640 LOC106571431 other upstream 2063408 23484408 ~ 23524035 (+)
G686448 LOC106571417 other upstream 2614607 22946501 ~ 22972836 (+)
LOC110529702 LOC106607944 other downstream 532649 26133191 ~ 26195544 (+)
LOC110529706 LOC106571495 other downstream 780586 26381097 ~ 26393547 (+)
jag2b LOC106571712 other downstream 1955742 27498161 ~ 27602164 (+)
G692343 LOC106571710 other downstream 2295159 27895701 ~ 27895987 (+)

Expression


Co-expression Network