LOC110529219


Basic Information

Item Value
gene id LOC110529219
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 26006882 ~ 26017782 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110529219
ATGGAATCCAAGACGTTATTCTACTCTCTGGGCCTCGTTTCTGGCAACGGTTTAACTTTGAGCAGTGAGCAAAAAGCTGCCCTGCAGACTTCCCTGGTCAACCTGAGGAACTATCTATACATTCTGGGCATACAGGGTGACTATTTCATTGCACAAGGGGTCTCAGATGACGAGATGAGTCATAAAAATAGCCTTTTCATtttcaactgtgtGGACTGGCACCGGCTTCCCCCTGCCGCGCTGAGGCAATGCTAGCGGAGGTTTCTTCTGCAGCAAAAGGTCGCTACGTGGGAGACTCCTCACATAAGTATGAGCACACAGAGACAAGGGGAGGGGGGCGAGGCTATGGAGGAGGACGTCATGGTGAGGAGAAGTATGTGACAAATTATATCAAGGTGAATGAGGAGAATAGGCTGCCCACCACTGTCCACACCATTGATAAGGAGGTGTCTGTGGTCCTGCCTCCATTAAGAGTCTCCATGGTCTGGTGCAGAGGGTAGCGCTATTTGCAGGTCTGTCCTCCTCAGAGATGGATCAACTCAGGTGCTTCCTGCACTTCACTGAGCCGAAAAACCTGAAGAAAAAATCCATCCTGGACTTGGCTGACCTCGATCCCTCCATCAACTTTGTGGACCCTCTGAGTTAGGACATCCCAAAAggttgtgGATCTAGCAGTTTGAGCACAGCAGTACTGTGTGTGATCAGCAGCATGCTGTGGCTGTGCCTGACcacctttgaagaacccttgacACCCTAGCACAGATTCATCTACATTGGCGACAGTCTCAAAGAACCTGGGCCTGCCCTTCATGTTTTAA

Function

NR:

description
PREDICTED: radial spoke head protein 9 homolog

GO:

id name namespace
GO:0003341 cilium movement biological_process
GO:0035082 axoneme assembly biological_process
GO:0005929 cilium cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110529219 True 818 mRNA 0.50 5 26006882 26017782

Neighbor

gene id symbol gene type direction distance location
LOC110529697 NA coding downstream 8197 25992424 ~ 25998685 (-)
LOC110529696 LOC106571482 coding downstream 133205 25854580 ~ 25873677 (-)
LOC110529694 LOC106571481 coding downstream 201312 25801320 ~ 25805570 (-)
LOC110529218 NA coding downstream 206488 25796900 ~ 25800394 (-)
LOC110529693 LOC106571480 coding downstream 231854 25758877 ~ 25775028 (-)
LOC110529220 LOC106571486 coding upstream 69664 26087446 ~ 26094609 (-)
LOC110529700 LOC106571487 coding upstream 77159 26094941 ~ 26106801 (-)
LOC110531082 pgm3 coding upstream 102683 26120465 ~ 26122280 (-)
LOC110529703 LOC106571490 coding upstream 154664 26172446 ~ 26175639 (-)
LOC110529708 LOC106571496 coding upstream 404713 26422495 ~ 26426074 (-)
G690093 NA non-coding downstream 6332 26000259 ~ 26000550 (-)
G690074 NA non-coding downstream 14864 25991726 ~ 25992018 (-)
G690047 NA non-coding downstream 33098 25973539 ~ 25973784 (-)
G690021 NA non-coding downstream 50612 25955763 ~ 25956270 (-)
G690112 NA non-coding upstream 2267 26020049 ~ 26020248 (-)
G690115 NA non-coding upstream 4800 26022582 ~ 26022784 (-)
G690219 NA non-coding upstream 17737 26035519 ~ 26035773 (-)
G690231 NA non-coding upstream 45092 26062874 ~ 26063101 (-)
G690237 NA non-coding upstream 55088 26072870 ~ 26073142 (-)
G690073 NA other downstream 15739 25990678 ~ 25991143 (-)
G690033 NA other downstream 41389 25965179 ~ 25965493 (-)
G689810 LOC106571475 other downstream 342217 25664165 ~ 25664665 (-)
G689723 rad51 other downstream 485594 25517566 ~ 25521288 (-)
cenpw LOC106571497 other upstream 411333 26428702 ~ 26430888 (-)
G691447 LOC106571509 other upstream 846428 26864210 ~ 26868078 (-)
G691747 NA other upstream 1297786 27315568 ~ 27315935 (-)
G692859 NA other upstream 2097954 28115736 ~ 28116048 (-)
si:dkey-85n7.8 NA other upstream 2461035 28478817 ~ 28481944 (-)

Expression


Co-expression Network