LOC110529703 (LOC106571490)


Basic Information

Item Value
gene id LOC110529703
gene name LOC106571490
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 26172446 ~ 26175639 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612155.2
ATACGTTTATGGGAGCTGAAAACAACACGTTTTATATGATTTTCCTACTTTTGAACACAAATTCCACAGTTCACGGGCTCAATAACTGAATTAAACTTCAGTCCTCCTTCTCATCGCTTTCCTCATCACCAGGGAGTACCTCCCCCGCTCTCATCTTGTAACATGAACGAGCGGCACCTTTTTCCATCAAATGTTTTCTTCGTCATGGGCAAATCTCAGTGCAGTGAAGATCTCGCTCACGGCTTTTCATTGCGTTCCGGTTGTTTGATGCGCGGGCGATGATGGGACGCGGTCTTTCACGCACTGACTGATACCCGACTGGATAAAAcaccttttttttaaagaggaATTTTGCTGACTTCTCCAACTTTTATTTTCTAATGCTTGCAGgCCCTGGTGGAGCAGTGCGATGACTCCCATTCCCCTGTGTCTGCTGCTGCTCTGTGCCCTGCCCCTGTGTCTTCTTGCCTGGGGGGGCCacggtgatggtgttgatgaagAGTATGGCTGGTCCATGCAGAGGGTCCCGTTAATTCTAGACAGGCACACAGTGCATCTGCGGAGCCCCACGTTTGGTGGGAAGGTTGAGGGGGCaggtgaggatgaggaggggggGTGTGGGATAAAGTGTCAGAGTGCCCTCCCCCCTCCCGACTGGGCCACACTGGAGAGCATGCTGGGATACGAGACGGTGTACGAGAACggcacgcgcacacacagcaACGTCACGCTGCAGGGCCTGAATGACACAACCTCACACACGCCCTtacacaccccctcacacactCGCAGGAAACGTCAGGTGTATGGCGAGGACGGACGCTTTGTCATATCGGACAGCCACTTCACCACCAGCTACCCGTTCTCCACGGCGGTCCGCCTATCCACGGGCTGCTCCGGGGTCCAAGTGTCTGAAAAACACATACTGACGGCAGCCCACTGCGTCCACGATGGGAAGGACTACCTGCAGGGGGTCCGCAGGCTGAAAGTGGGGGTCCTACAGGTCAAATCTAAACGAGGtaggaggggtgggaggaggagaggggggaggagaggaggaggagaggggcaaGGAGAGGAAGTggtaggagaagaggagaaagggaatgGGATAGATGGAGAAGAACCGAGACAGGAGCAGagacggagaggagggaggagaggaggaggagaggggcaaGGAGAGGAAGTggtaggagaagaggagaaagggaatgTGATAGATAGAGAAGAACCGAGACAGGAGCAGAgacggagaggagggagaaggaggaagggagaaagggagaaacagAACAGGGTTGATGAGACTGGAGCAGAGGGAGGTGAAGGAGGGAACatgaagaaggagaggggacaagGAGGGGGTAGGCAGAGAAAGAAAGGTAGCAGAAGCAGCCGTGTACAACGCAGCACCGAACCCAAAACTCAGCCCTCCTTCCACTGGACACGCGTAAAACAAACCCACATCCCCAAAGGTtggatacacacaggagataGAACCAACGCCATATCCCACAACTACGATTACGCCCTCCTGGAGCTCAAACAGGCAATTAAACAGAAGCACATGAAACTGGGTGTAGTGGCCGCTACAAAGCCCCTCCCCTTGGGTCGCATCCACTTCTCAGGGTTCGACAACGAGCCAGAGGGAGGACAAAAGGATGGAGGGGGGGAAAAGGTGGTCTATCGCTTCTGTTCAGTGACGGAGGAGTCAGACGACCTGTTGTATCAGCATTGTGATGCCCAGCAGGGGGCGTCAGGCGCTGGTGTATACATCCGCCTCAGACAGGAAGTGGTGGGGTCCAATAAGGGGAAGTGGCAGCGGAAGGTTATCGGGGTGTTCTCAGGGCACCGCCGGGTGGACGGGGACGGGGGTGAACAGAGGGACTATAATGTGGCGGTGAGGATCACTCCGCCTAAATACGCTCAGATCTGCCACTGGATCCATGGGGATCCCAGCATGTGTAGGGAGGCTTGAGACACCAGGGATATGACCGACTGATCAGAGTAAGAAAAAAAGAAGATATGCATTCATGTATCTCCTTTCACTGAGACCTCAAAGcgctgaggtggtggtggacaAACTAACCAATGCCCAGCACAGAATGATCAGATGGAATAGAACTTTGGAATATGGGATGATTTTCTTGCTTTGGTCAATCAAACAGATCCCTATCCAGACTGAGGTCTCAAAATTCTATGGTGCGATAAAAACAGGTTTCTTTGTCACACGTGCTTTTTGTTTCCAAGATATACCCATCGTGCACATAATATGGGTGCTAAGATGAGTTCCGTTGGTGATGATTTTTCTTGGGTAAATCTTTGTTTTTAGTGTCTACATGATTCAGTTATCTAGCCAATGCTCTTTTTGTTATCGGAATAGTTTTTTTCCAGGGTCTATATTTTGAGTGTAAATGTGTATTTTGTTGAGTATTTCCAGAACATATATTTTGCTTGGAAAAAAATTTGATCAAcagtgatgtaaaaaaaaaaagcaaaaataaaacatctttatATTAAAA

Function

NR:

description
inactive serine protease 35-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612155.2 True 2525 mRNA 0.51 2 26172446 26175639

Neighbor

gene id symbol gene type direction distance location
LOC110531082 pgm3 coding downstream 50166 26120465 ~ 26122280 (-)
LOC110529700 LOC106571487 coding downstream 65645 26094941 ~ 26106801 (-)
LOC110529220 LOC106571486 coding downstream 77837 26087446 ~ 26094609 (-)
LOC110529219 NA coding downstream 154664 26006882 ~ 26017782 (-)
LOC110529697 NA coding downstream 173761 25992424 ~ 25998685 (-)
LOC110529708 LOC106571496 coding upstream 246856 26422495 ~ 26426074 (-)
cenpw LOC106571497 coding upstream 253401 26428702 ~ 26430888 (-)
LOC110529710 LOC106571501 coding upstream 268478 26444117 ~ 26463361 (-)
LOC110529713 l3hypdh coding upstream 415891 26591530 ~ 26596738 (-)
LOC110529714 LOC106571503 coding upstream 423391 26599030 ~ 26602934 (-)
G690280 NA non-coding downstream 6065 26162614 ~ 26166381 (-)
G690237 NA non-coding downstream 99304 26072870 ~ 26073142 (-)
G690231 NA non-coding downstream 109345 26062874 ~ 26063101 (-)
G690219 NA non-coding downstream 136673 26035519 ~ 26035773 (-)
G690115 NA non-coding downstream 149662 26022582 ~ 26022784 (-)
G690691 NA non-coding upstream 64123 26239762 ~ 26240225 (-)
G690692 NA non-coding upstream 64992 26240631 ~ 26240834 (-)
G690693 NA non-coding upstream 66284 26241923 ~ 26242172 (-)
G690697 NA non-coding upstream 68871 26244510 ~ 26244983 (-)
G690696 LOC106613431 non-coding upstream 70688 26246327 ~ 26250741 (-)
G690073 NA other downstream 181303 25990678 ~ 25991143 (-)
G690033 NA other downstream 206953 25965179 ~ 25965493 (-)
LOC110529694 LOC106571481 other downstream 366971 25801320 ~ 25805570 (-)
G689810 LOC106571475 other downstream 507781 25664165 ~ 25664665 (-)
G689723 rad51 other downstream 651158 25517566 ~ 25521288 (-)
G691447 LOC106571509 other upstream 688571 26864210 ~ 26868078 (-)
G691747 NA other upstream 1139929 27315568 ~ 27315935 (-)
G692859 NA other upstream 1940097 28115736 ~ 28116048 (-)
si:dkey-85n7.8 NA other upstream 2303178 28478817 ~ 28481944 (-)

Expression


Co-expression Network