kcnh5a (LOC106571504)


Basic Information

Item Value
gene id kcnh5a
gene name LOC106571504
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 26613608 ~ 26734774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612176.2
CCCTAAATAGACCTCTCTGAAAAGGGTTTTAtctagcaccaaaaagggttcccctaGGGGGAAAAACCGAACAACTCTATGTGGTTCTATTTAGCGTCTttcttttctaagagtgtagccagCCTATTTGTTGGTGAATGTAATCTCATGCAAGAAAATGGACAGTGTTGCTTGAATTGCAAAAAGAGGGAGAATACGTTTAAGAACCCATTGAGCTATAGTTTACTTCCAGATAGGTTGAAAATATCGGCAAAATGTTCTAACAGTTTGGATTTCAAACTCATGCCGTTGCTTGAGATTATTGCATTGACCATCTGAGATTCAATGCCATCGGGTTTGCGGTGAAACATCGAGAGCGCAGGCGCACCAGGACAAACTCGTAGCCTGCGGAGCTGCTTTAGCTCTGTGATAAAGAATCTACAGCAAACCAGCCTCGGTGCATTGTTACCATGAGCTTCTTCACCCCACAGACTCTTACTTATCTAGACTATTTCACTTTTGCGACCAGCTTTCATAAAGCTTGAAGCCCCGAACGACACCTCCTGACCACAGAATGCACGGGGGAAAAAGAGGTTTGGTGGCACCTCAGAACACTTTTTTGGAGAACATTGTCCGGCGCTCAAGTGAAACAAGTTTCCTGTTGGGGAATGCCCAGATAGTGGAATGGCCAGTAGTATACAGTAATGACGGGTTTTGTAAGCTGTCGGGGTACCACAGGGCAGAAGTCATGCAAAGGAGCAGCACATGCAGTTTCATGTATGGGGACCTGACAGACAAGAACACAATAGATGAAGTCAGGCAGACCTTTGATAACTATGAATCACATTGCTTTGAAGTGCTGCTCTATAAGAAGAACAGGACACCCATATGGCTCTACATGCAGGTGGCTCCCATCAGGAACGAGAACGACAAGGTGGTTCTGTTCCTGTGTACCTTCAAAGACATAACTGTCTTCAAGCAGCCTATAGAGGATGAATCCACCAAGGGATGGAACAAGTTTGCCCGGCTGACCCGGGCACTGACCAGCAACAGCCGCAGCAACATGCAGCAGCTGACGCCCATGAACCAAGTCAACGAGGTCAGCCACAAGCACTCCAGACTGGCTGAGGCTCTACAGCTGGGCTCGGACATTCTCCCCCAGTACAAGCAGGAGGCGCCCAAGACGCCGCCCCACATCATCCTCCATTACTGCACCTTTAAAACCACCTGGGACTGGGTCATCCTCATCCTCACCTTCTACACAGCCATCATGGTGCCCTACAATGTCTCTTTCAAGACCAAGCAGAACAATTTGGCCTGGCTCGTGCTGGACAGCGTGGTAGATGTCATCTTCCTTGTGGACATTGTGCTCAACTTCCACACCACCTTCGTTGGGCCTGGTGGAGAGGTCATTTCGGACCCGAAGCTGATTCGAATGAACTACCTGAAGACCTGGTTCGTCATTGACCTGCTGTCCTGCCTGCCCTACGACATCATCAATGCCTTTGAAAACGTAAATGAGGATTCCATCTCAGACTCTTTGGCAGTGGGGCACCTGCGAGAGTCATCCAGTTCGCAGAGGAACGCCACGAGGGCAGAAGACTCAGTTCTCCCAggcCTCAGCAGCCTCTTCAGCTCGCTGAAGGTGGTCCGACTTCTCCGCTTGGGCCGCGTGGCCCGGAAGCTTGACCATTACCTGGAGTACGGGGCGGCGGTCTTGGTTCTACTGGTGTGTGTCTTCGGCCTGGTGGCTCACTGGCTGGCCTGCATCTGGTACAGCATTGGGGACTACGAGGTCATTGACGAAGCCACCAACACAATCAAGACAGACAGCTGGCTCTACCAGTTGGCCACGAGCATTGGCTCACCCTACCGCTACAACGCCAGCGGCTCTGGCCAGTGGGAGGGTGGCCCAAGCAAGGACACACTCtacatctcctctctctacttcaccaTGACCAGTCTCACCACCATCGGCTTTGGCAACATCGCTCCCACAACAGACGGCGAGAAGATCTTCTCTGTGGCGATGATGATGGTGGGCTCCCTACTGTATGCCACCATTTTTGGGAACGTCACCACCATCTTCCAGCAGATGTACACCAACACTAACCGCTACCACGAGATGCTCAACAATGTGCGTGACTTTCTCAAACTTTACCAGGTGCCAAAGGGACTGAGCGAGAGGGTCATGGATTACATCGTCTCTACTTGGGCCATGTCCAAGGGCATTGACACAGATAGGGTCCTGTCAATCTGTCCCAAAGATATGCGAGCAGACATCTGTGTCCACCTTAATAGACAGGTGTTCAATGAGCACCCAGCATTTCGACTGGCCAGTGATGGCTGCTTGCGCTCTCTAGCGGTTGAGTTCCAAACCACACACTGCGCCCCAGGGGACCTCATATTCCACGCTGGCGAAAGTGTTGACACCCTTTGCTTTGTAGTATCCGGGTCATTGGAAGTTATTCAGGACGACGAGGTCATCGCCATTCTAGGTAAGGGAGATGTGTTTGGGGATGTCTTCTGGAAGGAAGCTAATCTGGCACATGCTTGTGCCAATGTGCGGGCTCTCACCTACTGCGACTTGCACGTAATTCGGAGAGATGCTCTGCTGAAGGTGTTGGAGTTCTACACGGCTTTTGCCAACACATTCTCCCGCAACCTAATTCTCACCTGCAATTTGCGCAAACGGATAATCTTCCGAAAGATCGCCGATgtgaagaaggaggaggaagagcgcCGGCAGCAGAAGAATGAAGTAATGCTCTCCATTCCTATTGACCACCCGGTTCGCAAGCTCTTCCAGAAGTTCAAGCAGCAGAAAGAGATTCGCATGCCAATCCAAGCTCAGCCTGACCTGGAGCGCAACCGGCTTCAGGTTGAGCACCACCACCCCCTTACCAATCTCCCACACCAACAATGTCAGACTCACCCCTTGCAGCACCAAAATGGCTCCCCGATGCAGAATGGGGCACCTGGCACAGGTGGAGGGACTACCAGCAGTGGATCCAGTGTAGTTACTGTCTCCCAGATCACCCCGTTGCAGAGTTCACTGGCCTATGTCCACATTGGGGAGCCCATTCACACTGGTTGTCACGAGGTCAAGGAGCTGAAGCCCAGTGTGGTGGACCAGAACTGCCTGAGGGTCACCAGTCTGGTACGGCCcaggggtggaggtggtggtCAAGGCTGGATGAGGTTTAAGAATGCTACAGTAGTAGTGCCACTGGCCCCCGATGAACTTGAAGGGCCACagcagaaagaagaggaggaatggGGTAATGTGTCCCAATCCTCAGAACAGTTGACTGATGACAGCAAGAGCCAGGAGGCAGAAGGTGGGGAGAGCAGCAGCGGGGGTGGCGTCAGCAGCACAGGAGAGGGGGGCGACGAGAAGAGCGCACTCCACAAGACAGACTCCTGCGACAGTGGCATTACCAAGAGTGATCTTCGGATCGACAGGGCAGGGGACGCACCAAGCCCCTATGAGCGGAGTCCAATGGGGAGAAGTTCTTTTGAACACAGCCTCGGGGTTGGGAGTGTGGGTGTGCTTGGCCACCCCTTCCAACCCATGTCTGAACAGGTGCTGCTCCAGTCCACTCTCCAGGAGGCCAAGCTGGAGCTGAAGGGAGATATCCAGATGCTGAGTGGCCGTTTATCAACACTTGAAGCCCAAGTTAGTGAGATCCTCAGATTGCTGTCTGAGAAGAGGAGGCTCTCACTGCCACAGACCTCTACCCCCAAGGCTAAGATCAAATGCCAGGACATCTTCACCGTGTCAAGACCTGTCACACCGGACATTGAGAGAGACAATGGACCTTTTTGAATGACAAAAAAACATTGATGTATTTATTTGCGCCAACTTCCGTGCCCAATCTTTTTCTTTAATGGACAAGTTGAGGAAACTGGACACAGAATTTAGGTGGGAAATTGTTTTAGTGTAAATAACCATTTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGATATTTTAAAGAAACCTTTGGATTGCAATTGCTTGTACATTTATGCAGTTGACTGCATGCATAAATTATTTAAAGATACAGATTTTTCACTGTACAGTATCTTCAGTACAGTAGCACAGGGATTTAACCGTTTTTGACTTTGTTGATGTACTTTCACATTGAGTCTGCTCTTCCCAGATCCAGTCTATAGACCTTCTATACCGAGCACAAACAGCAGTAAAGCAGTAAAGAGATTTGTAAGAGCTTGGGTCACATAAACAAACATGTTACCGAAAAAAACTTTCCTCATTTAGCAACTTCCCTCATTTAGGTTAATCATGGTTAATCTTTAGTTAGCATTTGAATCGGAAATTAAAGATTTCCATTTTGTTGACTTATTTTTGTGTTGGCAGCCCTGGATTTAAGGGTTGTTGTGATCACCCCATACAGAAGCAATCTGTCAATATAATAATGAACAATCTGACAATAAGAATCAGACAGAAGGCCCCCTAGTAGTTCAGAAGGTTGTAAATCACTGATTCATATCGTGATCCACTAGTAGGTCAGAAGATTGAAAATCACTGATTCATATTGTGATTGCAAAGTGCAATGCTTAGAGTAGTCAATAATCATCTTGTAGACTTCCTGGTTGTTATTACACAACTTTATAAGATCTAAAGCTGTTTTATTGATCAGATGTTCAACCTGACTGTACCGATTGACAGAAGGTTGGTTACCAGTGTGGTCCCAAAACAAAGAAATGCTTGATACACAGGTATAGTCTAACACTACAAACCTGTATTGATAAGATCTAAAGCTGTTGTAATTGATCAAATATTCAGTACATCAATGCAGACTGACATGAAAACAGGCCCTGTTTAGGCAAATAGCCTCTGTGACTGTCTAATTGAcagaatcagaatcacctttattcgcAAAAAAATAAATTTTGCTGTGGAAAACTTGATCCAAAGATTAAGGCAGAGATGATTTAATGATATAATAGAACAATATTTAATCAAACAGCTGCAAGGGAGATGTATCTCTGATTTCACAGGGAAGAACTCAAAGAGTAAATGGTTTCCATGTCCATTATATAGTGGGAGGTGAATAAACAGAATATGCAGGCAGACAaacagaatatactgtatgtacgtaCACTATGAACAATGAAGCTAAAAACTACAGACTACACTATAAAACTACAAGcacattatacagtgccttgcgaaagtattcggcccccttgaactttgcgacc

Function

NR:

description
potassium voltage-gated channel subfamily H member 5-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0042391 regulation of membrane potential biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0000160 phosphorelay signal transduction system biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0000155 phosphorelay sensor kinase activity molecular_function
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04908 KCNH5, KV10.2; potassium voltage-gated channel Eag-related subfamily H member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612176.2 True 5207 mRNA 0.48 12 26613608 26734774

Neighbor

gene id symbol gene type direction distance location
LOC110529712 LOC106571498 coding upstream 22650 26466178 ~ 26590958 (+)
LOC110529706 LOC106571495 coding upstream 220061 26381097 ~ 26393547 (+)
LOC110529707 LOC106571493 coding upstream 237432 26363177 ~ 26376176 (+)
LOC110529705 LOC106571492 coding upstream 342350 26266259 ~ 26271258 (+)
LOC110529702 LOC106607944 coding upstream 441261 26133191 ~ 26195544 (+)
ppm1ab LOC106571506 coding downstream 12350 26747124 ~ 26758023 (+)
LOC110529717 LOC106571508 coding downstream 64816 26799590 ~ 26835405 (+)
si:ch211-212g7.6 LOC106571509 coding downstream 110906 26845680 ~ 26868116 (+)
atp5mpl cssa15h14orf2 coding downstream 155021 26889795 ~ 26891532 (+)
ppp1r13bb ppp1r13b coding downstream 181895 26916669 ~ 26997843 (+)
G690442 NA non-coding upstream 150716 26462655 ~ 26462892 (+)
G690443 NA non-coding upstream 153476 26452388 ~ 26460132 (+)
G690439 LOC106571501 non-coding upstream 163875 26449424 ~ 26449733 (+)
G690428 NA non-coding upstream 182669 26429117 ~ 26430939 (+)
G690394 NA non-coding upstream 252724 26360685 ~ 26360884 (+)
G691111 NA non-coding downstream 153814 26888588 ~ 26888904 (+)
G691113 NA non-coding downstream 160676 26895450 ~ 26895702 (+)
G691116 NA non-coding downstream 162846 26897620 ~ 26897850 (+)
LOC110529690 LOC106571476 other upstream 931881 25678604 ~ 25685894 (+)
G688823 NA other upstream 1552158 25058953 ~ 25061450 (+)
G688613 NA other upstream 1628782 24982729 ~ 24984826 (+)
jag2b LOC106571712 other downstream 821510 27498161 ~ 27602164 (+)
G692343 LOC106571710 other downstream 1160927 27895701 ~ 27895987 (+)
xrcc3 xrcc3 other downstream 1235702 27951635 ~ 27972016 (+)
G692424 NA other downstream 1335126 28069900 ~ 28070228 (+)
btbd7 btbd7 other downstream 1760511 28495104 ~ 28605625 (+)

Expression


Co-expression Network