XLOC_025765



Basic Information


Item Value
gene id XLOC_025765
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 54111389 ~ 54111972 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052383
tcacagtcatagcagtgtgatatggttTTATATTGTCACTGGTAGGACACTAAGGCACTTGACCTGTGGCCTCGagccaacgcatgcctcccacaaCTCGTATGACATTGCAAATAGCTGAAGCAAAAATATTAGCCCTTCTATgagttaaatatttcaaatattttcataattttgtCAAAGTGATGAAAGATTTTTCccacaacatttttaaatataattttattaattataataacacTTTTTATAGTTTTTGACATAATGACACTACACAATAAGAGACTAATActgtttaaagtgtaatttaaaggcttaactaggtcaattaggttaactaggcaagtttagTTATATAGGCAAGTcatttgataatattattattattattattattattattattattattattattattattattattattaataataataataataataataataataataatgataataataataataataataatgataataataatgataataataataataataataataataataattgttaaaggGACCAATAACTAACAATTGATTGATCATTTGATTGACTCAATC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052383 True 584 lncRNA 0.23 1 54111389 54111972

Neighbor


gene id symbol gene type direction distance location
XLOC_025764 CU633748.1 coding upstream 43750 54067523 ~ 54067639 (+)
XLOC_025762 col5a3a coding upstream 191926 53773256 ~ 53919463 (+)
XLOC_025761 NA coding upstream 458988 53526965 ~ 53652401 (+)
XLOC_025760 zmp:0000001048 coding upstream 589181 53511936 ~ 53522208 (+)
XLOC_025759 camsap3 coding upstream 661952 53352018 ~ 53449437 (+)
XLOC_025766 NA coding downstream 158731 54270703 ~ 54271345 (+)
XLOC_025767 NA coding downstream 171795 54283767 ~ 54284185 (+)
XLOC_025768 NA coding downstream 177706 54289678 ~ 54303624 (+)
XLOC_025769 NA coding downstream 220754 54332726 ~ 54336639 (+)
XLOC_025770 ppan coding downstream 441959 54553931 ~ 54567961 (+)
XLOC_025429 BX649540.1 misc upstream 23862353 30248739 ~ 30249036 (+)
XLOC_025750 NA non-coding upstream 1227965 52806272 ~ 52883424 (+)
XLOC_025751 CT573476.2 non-coding upstream 1282383 52828912 ~ 52829006 (+)
XLOC_025746 BX511096.1 non-coding upstream 1491214 52620058 ~ 52620175 (+)
XLOC_025776 NA non-coding downstream 722537 54834509 ~ 54836517 (+)

Expression



Co-expression Network