Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110529722 |
| gene name | LOC106571714 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 27011159 ~ 27244178 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nesprin-2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036985202.1 | False | 25772 | mRNA | 0.55 | 112 | 27011159 | 27244178 |
| XM_036985203.1 | False | 25769 | mRNA | 0.55 | 112 | 27011159 | 27244178 |
| XM_036985205.1 | False | 25700 | mRNA | 0.55 | 111 | 27011159 | 27244178 |
| XM_036985206.1 | False | 25682 | mRNA | 0.55 | 111 | 27011159 | 27244178 |
| XM_036985207.1 | False | 25670 | mRNA | 0.55 | 111 | 27011159 | 27244178 |
| XM_036985208.1 | False | 25220 | mRNA | 0.55 | 111 | 27011159 | 27244178 |
| XM_036985209.1 | False | 25118 | mRNA | 0.55 | 110 | 27011159 | 27244178 |
| XM_036985204.1 | True | 25759 | mRNA | 0.55 | 111 | 27038357 | 27244178 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppp1r13bb | ppp1r13b | coding | upstream | 13316 | 26916669 ~ 26997843 (+) |
| atp5mpl | cssa15h14orf2 | coding | upstream | 119627 | 26889795 ~ 26891532 (+) |
| si:ch211-212g7.6 | LOC106571509 | coding | upstream | 143043 | 26845680 ~ 26868116 (+) |
| LOC110529717 | LOC106571508 | coding | upstream | 175754 | 26799590 ~ 26835405 (+) |
| ppm1ab | LOC106571506 | coding | upstream | 254117 | 26747124 ~ 26758023 (+) |
| nudt14 | LOC106571713 | coding | downstream | 147539 | 27391717 ~ 27483687 (+) |
| jag2b | LOC106571712 | coding | downstream | 253983 | 27498161 ~ 27602164 (+) |
| btbd6b | LOC106571711 | coding | downstream | 665527 | 27909705 ~ 27914563 (+) |
| LOC110529728 | LOC106571709 | coding | downstream | 687323 | 27931501 ~ 27948051 (+) |
| xrcc3 | xrcc3 | coding | downstream | 707457 | 27951635 ~ 27972016 (+) |
| G691122 | NA | non-coding | upstream | 101678 | 26909081 ~ 26909481 (+) |
| G691119 | NA | non-coding | upstream | 108277 | 26902625 ~ 26902882 (+) |
| G691116 | NA | non-coding | upstream | 113309 | 26897620 ~ 26897850 (+) |
| G691113 | NA | non-coding | upstream | 115457 | 26895450 ~ 26895702 (+) |
| G691278 | NA | non-coding | downstream | 43310 | 27287488 ~ 27287996 (+) |
| G691279 | NA | non-coding | downstream | 44110 | 27288288 ~ 27288515 (+) |
| G691280 | NA | non-coding | downstream | 44939 | 27289117 ~ 27289321 (+) |
| G691281 | NA | non-coding | downstream | 45292 | 27289470 ~ 27289848 (+) |
| G691284 | NA | non-coding | downstream | 48031 | 27292209 ~ 27292609 (+) |
| LOC110529706 | LOC106571495 | other | upstream | 627733 | 26381097 ~ 26393547 (+) |
| LOC110529702 | LOC106607944 | other | upstream | 815615 | 26133191 ~ 26195544 (+) |
| LOC110529690 | LOC106571476 | other | upstream | 1329432 | 25678604 ~ 25685894 (+) |
| G688823 | NA | other | upstream | 1949709 | 25058953 ~ 25061450 (+) |
| G688613 | NA | other | upstream | 2026333 | 24982729 ~ 24984826 (+) |
| G692343 | LOC106571710 | other | downstream | 651523 | 27895701 ~ 27895987 (+) |
| G692424 | NA | other | downstream | 825722 | 28069900 ~ 28070228 (+) |
| btbd7 | btbd7 | other | downstream | 1251107 | 28495104 ~ 28605625 (+) |
