XLOC_025766



Basic Information


Item Value
gene id XLOC_025766
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 54270703 ~ 54271345 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052800
GTTCAGAGTGAGATCAGGTGGAATAAAAATGCCCTAAGCCCTGCAGCAGGctaaggaagaagaagaaaatcgTGCTGGATGGAGGTTGATAGTTATCGTGCGAGAATAGCGTCGCTAGCCAAGCAGCCATAATAGGAATCCAGCGGCTCAGCCAAGCCATGCATGGGAAATCTGTTTTGTGATGGACTGCCTGGTTTCTCCCAGAGCCCCTTGAGTGTGCCATCTGTGCTCGTGCTGTTGTGGGAGTGTGCGTAGGTGTGCGAGGGCTGGAGAGACGGGCATAAACTAACCCACACCAACAACAGGGCACAGCACTATGTTTTCAACAGATTGACCAACACTTTCACATGGAGAAAGAGTCAGGACAAGGCAGAATTTGAAGACTTGTTTTCAAGTGTTGACGTTGTCAGTAtggcatttgtaaaaaaataaaataaaaatcttataaATC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052800 True 451 lncRNA 0.46 2 54270703 54271345

Neighbor


gene id symbol gene type direction distance location
XLOC_025763 olfm2a coding upstream 32243 54012708 ~ 54238460 (+)
XLOC_025765 NA coding upstream 158731 54111389 ~ 54111972 (+)
XLOC_025764 CU633748.1 coding upstream 203064 54067523 ~ 54067639 (+)
XLOC_025762 col5a3a coding upstream 351240 53773256 ~ 53919463 (+)
XLOC_025761 NA coding upstream 618302 53526965 ~ 53652401 (+)
XLOC_025767 NA coding downstream 12422 54283767 ~ 54284185 (+)
XLOC_025768 NA coding downstream 18333 54289678 ~ 54303624 (+)
XLOC_025769 NA coding downstream 61381 54332726 ~ 54336639 (+)
XLOC_025770 ppan coding downstream 282586 54553931 ~ 54567961 (+)
XLOC_025771 p2ry11 coding downstream 301380 54572725 ~ 54577985 (+)
XLOC_025429 BX649540.1 misc upstream 24021667 30248739 ~ 30249036 (+)
XLOC_025750 NA non-coding upstream 1387279 52806272 ~ 52883424 (+)
XLOC_025751 CT573476.2 non-coding upstream 1441697 52828912 ~ 52829006 (+)
XLOC_025776 NA non-coding downstream 563164 54834509 ~ 54836517 (+)
XLOC_025787 CT583658.1 non-coding downstream 1027698 55299043 ~ 55299158 (+)

Expression



Co-expression Network