Item | Value |
---|---|
gene id | LOC110529728 |
gene name | LOC106571709 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 27931501 ~ 27948051 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036985211.1 | False | 7432 | mRNA | 0.46 | 19 | 27931501 | 27948051 |
XM_036985212.1 | False | 2533 | mRNA | 0.47 | 16 | 27931505 | 27942656 |
XM_021612196.2 | False | 4522 | mRNA | 0.46 | 14 | 27931506 | 27941756 |
TU788207 | True | 236 | lncRNA | 0.40 | 1 | 27941420 | 27941655 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
btbd6b | LOC106571711 | coding | upstream | 16938 | 27909705 ~ 27914563 (+) |
jag2b | LOC106571712 | coding | upstream | 329337 | 27498161 ~ 27602164 (+) |
nudt14 | LOC106571713 | coding | upstream | 447814 | 27391717 ~ 27483687 (+) |
LOC110529722 | LOC106571714 | coding | upstream | 687323 | 27011159 ~ 27244178 (+) |
ppp1r13bb | ppp1r13b | coding | upstream | 933658 | 26916669 ~ 26997843 (+) |
xrcc3 | xrcc3 | coding | downstream | 3584 | 27951635 ~ 27972016 (+) |
LOC110529731 | klc1 | coding | downstream | 28692 | 27976743 ~ 28000906 (+) |
serpina10a | LOC106571703 | coding | downstream | 84350 | 28032401 ~ 28050434 (+) |
asb2a.2 | LOC106571697 | coding | downstream | 268149 | 28216200 ~ 28224790 (+) |
LOC110529736 | LOC106571696 | coding | downstream | 288602 | 28236653 ~ 28266785 (+) |
G692367 | NA | non-coding | upstream | 2029 | 27929266 ~ 27929472 (+) |
G692364 | NA | non-coding | upstream | 6487 | 27924786 ~ 27925014 (+) |
G692363 | NA | non-coding | upstream | 7005 | 27924296 ~ 27924496 (+) |
G692361 | NA | non-coding | upstream | 9099 | 27922055 ~ 27922402 (+) |
G692359 | NA | non-coding | upstream | 11074 | 27920023 ~ 27920427 (+) |
G692333 | NA | non-coding | downstream | 24474 | 27972525 ~ 27973844 (+) |
G692381 | ppp4r4 | non-coding | downstream | 50005 | 27998056 ~ 28068929 (+) |
G692422 | NA | non-coding | downstream | 120957 | 28069008 ~ 28069294 (+) |
G692464 | NA | non-coding | downstream | 174526 | 28122577 ~ 28123405 (+) |
G692465 | NA | non-coding | downstream | 175477 | 28123528 ~ 28123934 (+) |
G692343 | LOC106571710 | other | upstream | 35514 | 27895701 ~ 27895987 (+) |
LOC110529706 | LOC106571495 | other | upstream | 1548075 | 26381097 ~ 26393547 (+) |
LOC110529702 | LOC106607944 | other | upstream | 1735957 | 26133191 ~ 26195544 (+) |
LOC110529690 | LOC106571476 | other | upstream | 2249774 | 25678604 ~ 25685894 (+) |
G692424 | NA | other | downstream | 121849 | 28069900 ~ 28070228 (+) |
btbd7 | btbd7 | other | downstream | 547234 | 28495104 ~ 28605625 (+) |
G693207 | NA | other | downstream | 756799 | 28704850 ~ 28705752 (+) |
cdca4 | LOC106571684 | other | downstream | 982709 | 28930668 ~ 28939888 (+) |