XLOC_025767



Basic Information


Item Value
gene id XLOC_025767
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 54283767 ~ 54284185 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052384
AGAAAATTGCCagcataaacaaatataatagaGTAAAGATTAAAGTGAAGTAAAATGTTGCTTCATGGTTTTTCATAGTCAAACATCATTCAGGTACAGAAacagtataattaaaagtaactGTACAGGCAGAGTTGTCTTGCTCATCCTCCTCACAAGTTTATTTCTTAAAGTAGAGAGTCTTTCAAAGGCATTTGCAAATTGATCCAATCCAGAAATCATTGTTTATAATGCATGAACTCAGGCTCATTCTACGTACACCTGTAAACATTTCTGAACAGTGCGAAATATGTCACaggaaaaaggttttttttttttttgcagtttttgcagaGCCGCTGTGTATGATTTTTCAAATCTCatatttctctcgtgagtgccattcttgcctgctgttcttgcataaatccaacagaggc

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052384 True 419 lncRNA 0.35 1 54283767 54284185

Neighbor


gene id symbol gene type direction distance location
XLOC_025766 NA coding upstream 12422 54270703 ~ 54271345 (+)
XLOC_025763 olfm2a coding upstream 45307 54012708 ~ 54238460 (+)
XLOC_025765 NA coding upstream 171795 54111389 ~ 54111972 (+)
XLOC_025764 CU633748.1 coding upstream 216128 54067523 ~ 54067639 (+)
XLOC_025762 col5a3a coding upstream 364304 53773256 ~ 53919463 (+)
XLOC_025768 NA coding downstream 5493 54289678 ~ 54303624 (+)
XLOC_025769 NA coding downstream 48541 54332726 ~ 54336639 (+)
XLOC_025770 ppan coding downstream 269746 54553931 ~ 54567961 (+)
XLOC_025771 p2ry11 coding downstream 288540 54572725 ~ 54577985 (+)
XLOC_025772 eif3g coding downstream 297802 54581987 ~ 54589823 (+)
XLOC_025429 BX649540.1 misc upstream 24034731 30248739 ~ 30249036 (+)
XLOC_025761 NA non-coding upstream 631366 53526965 ~ 53652401 (+)
XLOC_025750 NA non-coding upstream 1400343 52806272 ~ 52883424 (+)
XLOC_025776 NA non-coding downstream 550324 54834509 ~ 54836517 (+)
XLOC_025787 CT583658.1 non-coding downstream 1014858 55299043 ~ 55299158 (+)
XLOC_025788 NA non-coding downstream 1102030 55386215 ~ 55387657 (+)

Expression



Co-expression Network