Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110529737 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 28282250 ~ 28295030 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002474434.2 | False | 576 | mRNA | 0.44 | 2 | 28282250 | 28283104 |
| TU788408 | False | 404 | lncRNA | 0.42 | 2 | 28282398 | 28283080 |
| TU788409 | True | 308 | lncRNA | 0.47 | 3 | 28282398 | 28295030 |
28,274,000
28,276,000
28,278,000
28,280,000
28,282,000
28,284,000
28,286,000
28,288,000
28,290,000
28,292,000
28,294,000
28,296,000
28,298,000
28,300,000
28,302,000
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529736 | LOC106571696 | coding | upstream | 15465 | 28236653 ~ 28266785 (+) |
| asb2a.2 | LOC106571697 | coding | upstream | 57460 | 28216200 ~ 28224790 (+) |
| serpina10a | LOC106571703 | coding | upstream | 231816 | 28032401 ~ 28050434 (+) |
| LOC110529731 | klc1 | coding | upstream | 281344 | 27976743 ~ 28000906 (+) |
| xrcc3 | xrcc3 | coding | upstream | 311420 | 27951635 ~ 27972016 (+) |
| LOC110529738 | LOC106571695 | coding | downstream | 18264 | 28301368 ~ 28314736 (+) |
| btbd7 | btbd7 | coding | downstream | 212000 | 28495104 ~ 28605625 (+) |
| si:dkeyp-55f12.3 | NA | coding | downstream | 340430 | 28623534 ~ 28625610 (+) |
| itpk1a | itpk1 | coding | downstream | 349980 | 28633084 ~ 28696724 (+) |
| LOC110531084 | LOC106571688 | coding | downstream | 521626 | 28804730 ~ 28806416 (+) |
| G692486 | NA | non-coding | upstream | 126060 | 28155967 ~ 28156190 (+) |
| G692480 | NA | non-coding | upstream | 131209 | 28150839 ~ 28151041 (+) |
| G692465 | NA | non-coding | upstream | 158316 | 28123528 ~ 28123934 (+) |
| G692464 | NA | non-coding | upstream | 158845 | 28122577 ~ 28123405 (+) |
| G692422 | NA | non-coding | upstream | 212956 | 28069008 ~ 28069294 (+) |
| G692608 | NA | non-coding | downstream | 63676 | 28346780 ~ 28347075 (+) |
| G693082 | NA | non-coding | downstream | 181197 | 28464301 ~ 28464837 (+) |
| G693206 | NA | non-coding | downstream | 429307 | 28712411 ~ 28718652 (+) |
| G693216 | NA | non-coding | downstream | 444036 | 28727140 ~ 28735356 (+) |
| G693256 | NA | non-coding | downstream | 497502 | 28780606 ~ 28780882 (+) |
| G692424 | NA | other | upstream | 212022 | 28069900 ~ 28070228 (+) |
| G692343 | LOC106571710 | other | upstream | 386263 | 27895701 ~ 27895987 (+) |
| jag2b | LOC106571712 | other | upstream | 725231 | 27498161 ~ 27602164 (+) |
| LOC110529706 | LOC106571495 | other | upstream | 1898824 | 26381097 ~ 26393547 (+) |
| G693207 | NA | other | downstream | 421746 | 28704850 ~ 28705752 (+) |
| cdca4 | LOC106571684 | other | downstream | 647656 | 28930668 ~ 28939888 (+) |
| G694036 | NA | other | downstream | 1507893 | 29790997 ~ 29792747 (+) |
| G699605 | NA | other | downstream | 5844489 | 34127593 ~ 34128301 (+) |
