si:dkey-85n7.8


Basic Information

Item Value
gene id si:dkey-85n7.8
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 28478817 ~ 28481944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612213.2
GGGGTCTATTTCACATGCGTTGGGAGGTTCCTCAGCACTCTTGAGACCCAAAGCTCAAGAGCTACATGCGCTGACTTCCTCCCCCATCCCTCACATCCCCACACATTCACAACTGTCGGGATGGTCATGGCCCTGAAGGGGGTCCCCCAGGCAGCGTCTCTGGTACGGGCTAAAATGGTCCTGCAAGACAGGAGGTCCAGCATCTACAGCAAGCCACCCAAGACCAAGATCGGACCTGGGcAAAGCTTCTTTATCATGTCCGTCTTTGCTGTCGGCATGCTTGCTCCGGCCGGCTGGATCATGCACCACATCCCAGAGTACCGCCAAAGACCACGTCCTTCATCAAGACCGTCGTAAAGAAGAAGACCCCAacgtcttcacacacacacacgcacgctacAAACCACGGCTGTATTCAACATATTAGCCACCATGCTATCAAATACTGTACCTTGCTAATGTATAACAacacacattatctacagtataAATGATATTCAATGGCCACAATAATAACGGGAAAATAACATGCACTTTGAAGGGACCATGGAAGACATTTCTGCATGACTGTCATGAGTATGTTTTTGTATgatgtcttttttttattttaaatattctGAGTATTGCAGTAGCATGGTGTCTAATGTCTCATGAATATGGCCCCTAATGTCACTGCTGCATCCAGTTGCAATGACACGTCTGTAAAACTGCCAACTCACTGCCATCATCAATAAATACATGCTGTGTTGgcaa
>TU789000
CCCAAAGCTCAAGAGCTACATGCGCTGACTTCCTCCCCCATCCCTCACATCCCCACACATTCACAACTGTCGGGATGGTCATGGCCCTGAAGGGGGTCCCCCAGGCAGCGTCTCTGGTACGGGCTAAAATGGTCCTGCAAGACAGGAGGTCCAGCATCTACAGCAAGCCACCCAAGACCAAGATCGGACCTGGGcAAAGCTTCTTTATCATGTCCGTCTTTGCTGTCGGCATGCTTGCTCCGGCCGGCTGGATCATGCACCACATCCCAGAGTACCGCCAAAGACCACGTCCTTCATCAAGACCGTCGTAAAGAAGAAGACCCCAacgtcttcacacacacacacgcacgctacAAACCACGGCTGTATTCAACATATTAGCCACCATGCTATCAAATACTGTACCTTGCTAATGTATAACAacacacattatctacagtataAATGATATTCAATGGCCACAATAATAACGGGAAAATAACATGCACTTTGAAGGGACCATGGAAGACATTTCTGCATGACTGTCATGAGTATGTTTTTGTATgatgtcttttttttattttaaatattctGAGTATTGCAGTAGCATGGTGTCTAATGTCTCATGAATATGGCCCCTAATGTCACTGCTGCATCCAGTTGCAATGACACGTCTGTAAAACTGCCAACTCACTGCCATCATCAATAAATACATGCTGTGTTGgcaa

Function

NR:

description
cytochrome c oxidase subunit 8B, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612213.2 False 753 mRNA 0.47 2 28478817 28481944
TU789000 True 707 TUCP 0.47 2 28478817 28481898

Neighbor

gene id symbol gene type direction distance location
prima1 prima1 coding downstream 90513 28326936 ~ 28388304 (-)
ppp4r4 ppp4r4 coding downstream 301143 28050159 ~ 28177674 (-)
LOC110529732 LOC106571705 coding downstream 454892 28011797 ~ 28023925 (-)
brf1b LOC106571710 coding downstream 527367 27824150 ~ 27951450 (-)
LOC110529221 NA coding downstream 862723 27615000 ~ 27616094 (-)
ubr7 ubr7 coding upstream 124327 28606271 ~ 28624188 (-)
tmem251 tmem251 coding upstream 143468 28625412 ~ 28635685 (-)
chga chga coding upstream 222905 28704849 ~ 28727911 (-)
LOC110529748 NA coding upstream 254850 28736794 ~ 28766673 (-)
si:dkey-177p2.18 LOC106571734 coding upstream 294493 28776437 ~ 28804357 (-)
G693085 NA non-coding downstream 12979 28465620 ~ 28465838 (-)
G692926 NA non-coding downstream 250003 28228421 ~ 28228814 (-)
G692909 NA non-coding downstream 282286 28196155 ~ 28196531 (-)
G692879 NA non-coding downstream 327725 28150777 ~ 28151092 (-)
G692864 NA non-coding downstream 354169 28124417 ~ 28124648 (-)
G693390 itpk1 non-coding upstream 152079 28634023 ~ 28665934 (-)
G693468 NA non-coding upstream 285807 28767751 ~ 28768156 (-)
G693471 NA non-coding upstream 288057 28770001 ~ 28770212 (-)
G693488 NA non-coding upstream 303165 28785109 ~ 28785516 (-)
G693517 vipas39 non-coding upstream 391374 28873318 ~ 28876113 (-)
G692859 NA other downstream 362769 28115736 ~ 28116048 (-)
G691747 NA other downstream 1162882 27315568 ~ 27315935 (-)
G691447 LOC106571509 other downstream 1610739 26864210 ~ 26868078 (-)
cenpw LOC106571497 other downstream 2047974 26428702 ~ 26430888 (-)
G690073 NA other downstream 2487674 25990678 ~ 25991143 (-)
G693383 btbd7 other upstream 111397 28593341 ~ 28594431 (-)
G693665 NA other upstream 476451 28958395 ~ 28958832 (-)
G694858 LOC105017690 other upstream 1519819 30001763 ~ 30062168 (-)
G696068 NA other upstream 2364958 30846902 ~ 30847209 (-)
G696073 NA other upstream 2373163 30855107 ~ 30855407 (-)

Expression


Co-expression Network