si:dkeyp-55f12.3


Basic Information

Item Value
gene id si:dkeyp-55f12.3
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 28623534 ~ 28625610 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036985235.1
TGCCGCTATGCCTCGGGTCAGAGTTCAAACTAGGGTCATGGTTCAACAATCATGGCAGCTACTGAGATACGAGGAGAGCTAAAATACAGGGATGGCCTGAAGAAAGAGATTATcataaaaacagaaaacaacctgACTTCTATGATAGTGGGGATTAAGAAATTAAACGCAGACGTATCGGGGCTCCTCACTGATCTCGTTGTACAAGAACAATTTTGCGGAGGAAATGACAAGGGGGATTTGCAAGTCGACGACGatgaagaggaggaagatgaagacACAAAAGCCCCTATTATGCAGCCTCCTGCAAAGCGGTCCAAGACCTTGAGGGCCTGACAagggctctgtcccaaatggcaccctttttctTATAGttcactccttttgaccagggcccaagtagtgcactaggtagggaataggttgccatttgggacttaaGACTACTGTAGGAAGAAGGGTCCTGGCATACAAGACTGGAAGACACTGTTTTGGGGGCAGATATGCCAGCCCTTATTATTCAATCCACTGGGTGGCTATTATTAATTAATTCCCACTCATGTATGGTATTGCTCCTGCCTTGGCAATCATTGCAGTTATGATCTACATCTTTCTCTTGATACaattgaaatgtttgttttgaaCATTTGTATAAATGTCAATCATTTAAGTGGAATGTATTTCAGACATCTTGTTAATGGATAATAGAATTGCACTGTCCCCGCAGCATTTGCTTGCTTTGAGAAATGACATGAACGGTCTGCAGACATTTTCCCATAACGTTTAATTTTCTTACAATCCAGACCTTATTTTAATCACAGTGCATTTAGATTTGAAAGGCAATAAAAATCAGAAGCACCAACGTGAATAGCCACTCATTCTTTTAAACAGACCAAACAAGCccatattttttttctttctaataCGACTATTCCTTACccattaacacttttttttttttttttt

Function

NR:

description
nucleolar complex protein 2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036985235.1 True 966 mRNA 0.41 2 28623534 28625610

Neighbor

gene id symbol gene type direction distance location
btbd7 btbd7 coding upstream 17909 28495104 ~ 28605625 (+)
LOC110529738 LOC106571695 coding upstream 308798 28301368 ~ 28314736 (+)
LOC110529737 NA coding upstream 340430 28282250 ~ 28295030 (+)
LOC110529736 LOC106571696 coding upstream 356749 28236653 ~ 28266785 (+)
asb2a.2 LOC106571697 coding upstream 398744 28216200 ~ 28224790 (+)
itpk1a itpk1 coding downstream 7474 28633084 ~ 28696724 (+)
LOC110531084 LOC106571688 coding downstream 179120 28804730 ~ 28806416 (+)
LOC110529749 NA coding downstream 184133 28809743 ~ 28814043 (+)
LOC110529751 NA coding downstream 190181 28815791 ~ 28825392 (+)
vipas39 vipas39 coding downstream 235049 28860659 ~ 28881460 (+)
G693082 NA non-coding upstream 158697 28464301 ~ 28464837 (+)
G692608 NA non-coding upstream 276459 28346780 ~ 28347075 (+)
G692486 NA non-coding upstream 467344 28155967 ~ 28156190 (+)
G692480 NA non-coding upstream 472493 28150839 ~ 28151041 (+)
G693206 NA non-coding downstream 86801 28712411 ~ 28718652 (+)
G693216 NA non-coding downstream 101530 28727140 ~ 28735356 (+)
G693256 NA non-coding downstream 154996 28780606 ~ 28780882 (+)
G693262 NA non-coding downstream 165653 28791263 ~ 28791470 (+)
G693263 NA non-coding downstream 166323 28791933 ~ 28792236 (+)
G692424 NA other upstream 553306 28069900 ~ 28070228 (+)
xrcc3 xrcc3 other upstream 651518 27951635 ~ 27972016 (+)
G692343 LOC106571710 other upstream 727547 27895701 ~ 27895987 (+)
jag2b LOC106571712 other upstream 1066515 27498161 ~ 27602164 (+)
G693207 NA other downstream 79240 28704850 ~ 28705752 (+)
cdca4 LOC106571684 other downstream 305150 28930668 ~ 28939888 (+)
G694036 NA other downstream 1165387 29790997 ~ 29792747 (+)
G699605 NA other downstream 5501983 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 6829238 35454437 ~ 35462086 (+)

Expression


Co-expression Network