si:dkey-177p2.18 (LOC106571734)


Basic Information

Item Value
gene id si:dkey-177p2.18
gene name LOC106571734
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 28776437 ~ 28804357 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611343.2
AGATAAGGTTGGCCTCATATAATGGCCGTGCCCTCTGGCCGTGCATCACATTGTGCTGTCCCCACACACCACACGCCACTATGGGGTGGCTTTTGATTGCCGTGGCAACCTGTGCGCTAGTCTCCTCTGCCAAAGGCAACAAGTGGTGGTGGCAGTATGAGGAAGGCATACGACACTACAGCCAGGAGGCTCTCCACAAGGAGTTTCCAGAGAATACCAGACCGGTGAACTTCACACATTCTCCTTTTCAATGTCCTGACATGAGTCGCTCGCCCACTGTCCCCTCATCAGTTGAGTTGGTAAAGGCAGCGGACATTAAAGTCATTGCTGCCCTGGGGGATTCTCTGACGACCGCCATAGGTGCCAATGCCACCAACGTCCTTGGGATTCCTATCGAGTTCCGTCACGTGTCATGGAGCATCGGGGGCCATGGATCATACCAAGATGTCATTACACTGGCAAATATCGTAAGGCTTTTCAATCCCAATGTGCTTGGTGCTGCACCGGCCAAGACTGTCCATGGAACCTCAGCCCCCCTCAGTGAAACAGGATTCAACCTGGCCGTGACCGGACACAACACCTTTAATCTACCAGGGCAGACCAGACATCTCATCGACACACTGAGAAACTATGAGGGCCTGAACTTTGATGAGGACTGGAAGCTGCTGACCATTCTCATAGGCATGAACGACATCTGTGATTACTGCAAGGATAAGGTTCTTTTCTCAGTGGACAATTACATTCACTACATGACGAACTCCTTGGAAATGCTAATGAACGAGGTTCCCCGTATGATTGTGAATGTAGTTCAAATCCTGCCCATGGAAACCTTGAggcaggtccagaggcccacccCAGGCTGCCTGCTCCAACGATCATTCTGTTCCTGCCTGATCAAGCCCGGGGCTGGTTCCCCTGAACTGAAGGAGCTAGTGGAGATCAACCTAGAGTTTCAGAAACGTCTGGAGCAGCTCCTCCACAGCGATAGCTTCTTCAGGGAGGACTTTGCCGTTGTTCTCCAGCCCTTCATGAAACAAGCAGACCCTCCTCGCCTCCCGAATGACAAGATCGACATGACCtttttcacccatgactgctttCACTTCACCATAAAGGGCCATGAGGAGCTAGCTAAGGGGCTGTGGAACAACATGTTCCAGCCAGAGGGAGGGAAGTTTATGGTGTCAAGCTTTTCTGACCCCATCGAGCTCATCTGCCCACCGATGGATCACCCCTACATCTACACCCGACCTGCCAAAAGAGGCCAGTCCACCATACCCGTTGTCCCCAGGTCGGCTATTCCAACGCGGGAAACCCTTCTTCTGTCTCACCTTGTGGTCCTGGCTGGTATTCTGTCCTGGGCCATCACTGCTTTAGCCTCTCTATAACACTAATAAACTTATACGTGGGGTGAATATAGGTAACATTATGGTTGCAGTTGTAATGATTGTGGGTGTTTTCTTTGTTGCTGCCATGCCTGCATTGTCAAGTATTGAACACAAGAGGGCCCACTGACCCTGGGCCTCTACCAACCCCTGTGTTCTGtgaccatagagaatgatagaggcctctagtgacCAAAAGGTCTTAtaagcatgggcagcgccattgaggtcttctaccattttcatgtagacaactggctgatccctcctggtgaccctgttggagtcatgtccaaccAGGTCATCAGGAGGAATCAGCTAATCgtgaagaagaaaattgactacttcaaaatggatatgcccatgctgtcacagacactataatggcacagatacaaatatgagttctctatctatctctatggctgTGACTGAGAAGACAAAAAGACCAACAATGGAAATCTGATATTGGAGGTGGACACGATATGTCAGTGCAATCTGTGCGTGTTGGTGAcgtccaatacacacagaatgACACAAGCTGCTTTAgaaatctatctatctatctatcattgAGAGGGGGATGGGACTGTCAATAGGCATTGTGATTTTCCCCTGTGCTGTGGCAGAGCCTGCTCATCATTCATCTAATTGTGAACCCCTTCTACAATAACAAACCACACCAAACAAAAAGGCCAGGTGATGGCTAAATTTAGCTCATCGTGTTGTTTCAATGGGTTTGCTCTGAGGCTAATTATTTGAGCATTTTCTGTTTCCTTTAGACTAGAATAGCAAGAACCGcataataaacattgagttgCATTGAGATTATAATGGGCTGGCTCTGAAAATAACATATTTAGGTGAACATGTAAACTGTGAGGTGTCCCATAGGCTATAGGCATGGGATAATTGGTTTTTCAACGGTCAACCTTGTGTATCTGTTTTAAAGGGCAATAAACAGTTTGGCAATTCAA

Function

NR:

description
phospholipase B1, membrane-associated-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611343.2 True 2362 mRNA 0.48 16 28776437 28804357

Neighbor

gene id symbol gene type direction distance location
LOC110529748 NA coding downstream 9764 28736794 ~ 28766673 (-)
chga chga coding downstream 48526 28704849 ~ 28727911 (-)
tmem251 tmem251 coding downstream 140752 28625412 ~ 28635685 (-)
ubr7 ubr7 coding downstream 152249 28606271 ~ 28624188 (-)
si:dkey-85n7.8 NA coding downstream 294493 28478817 ~ 28481944 (-)
LOC110529750 LOC106571688 coding upstream 18346 28822703 ~ 28844827 (-)
ahsa1a LOC106571686 coding upstream 46517 28850874 ~ 28860111 (-)
LOC110529757 LOC106571682 coding upstream 185900 28990257 ~ 29005160 (-)
lcb2 lcb2 coding upstream 220926 29025283 ~ 29029716 (-)
LOC110529223 snw1 coding upstream 242066 29046423 ~ 29096035 (-)
G693471 NA non-coding downstream 6225 28770001 ~ 28770212 (-)
G693468 NA non-coding downstream 8281 28767751 ~ 28768156 (-)
G693390 itpk1 non-coding downstream 110503 28634023 ~ 28665934 (-)
G693085 NA non-coding downstream 310599 28465620 ~ 28465838 (-)
G692926 NA non-coding downstream 547623 28228421 ~ 28228814 (-)
G693517 vipas39 non-coding upstream 68961 28873318 ~ 28876113 (-)
G693527 NA non-coding upstream 77946 28882303 ~ 28882931 (-)
G693528 NA non-coding upstream 79267 28883624 ~ 28884010 (-)
G693530 NA non-coding upstream 82077 28886434 ~ 28886754 (-)
G693652 NA non-coding upstream 137505 28941862 ~ 28942115 (-)
G693383 btbd7 other downstream 182006 28593341 ~ 28594431 (-)
G692859 NA other downstream 660389 28115736 ~ 28116048 (-)
G691747 NA other downstream 1460502 27315568 ~ 27315935 (-)
G691447 LOC106571509 other downstream 1908359 26864210 ~ 26868078 (-)
G693665 NA other upstream 154038 28958395 ~ 28958832 (-)
G694858 LOC105017690 other upstream 1197406 30001763 ~ 30062168 (-)
G696068 NA other upstream 2042545 30846902 ~ 30847209 (-)
G696073 NA other upstream 2050750 30855107 ~ 30855407 (-)
G696499 NA other upstream 2672997 31477354 ~ 31478027 (-)

Expression


Co-expression Network