LOC110531085


Basic Information

Item Value
gene id LOC110531085
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 31145534 ~ 31146912 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614359.2
AGTAGATATGTGGCGGATCCTGCTTTAATGACCATCACCAAGCCAGAACACTTCGAGGCCAACCCTCAGAGCCAGGCTGGCAGTTGGCCGGTGGCTAAACCTCAGCGCCCAGCACCCCCAGTACAGAAAACACGAAACAGTGGAGGCTGGCTCAGGTGGTTCTTCGGTGAAAAGGAAGAAGTTCCTCAGATGACAAGGATACCAGATGACAAGCCTAATTCTATGGTCTGGGATCAAAACCTGCACAGATGGGTTGACGCAAGTCCCATGTCCAAGACTGAGAACAAGCCTGTTCCACCTCCTCCCCCGATGGGGATGTATCTGGGGAACTCTAGTCTCCCCAAAGGAGTGAATCCTTACTCCATGAAAGCAGCAGATCAAGGAAGCCTAGGGGACAGGTATCCCAAGCTATTGTACCATGGTGGGATCACCACAACGCCTCCATACCAGGGTCCTGGATCGCTACCTGCCCAGCATGCAACACTCATGGCACCGATGACTGTGCCATTCGATGTTCACAGGCAGAAACTTGGCCCAGGCACTCTACCCTTTTGAGGTTCGACACTGAACAATCCTTCTGCAACGATTCATTTAATTAGCTTTAATATACATCAACGCTTGGCTGAAGTTGCAGTGATGTTTAAGCTATTTATTTTTGTCTCACAGGTCGTTTTCCAGGAGGGATCATTTGATATTTCAGCATTTTAAAAGACAAAATAAAATAAGATTTCGGGCTTTGAAAAGTTATTAAAAGTCTGTATGTTCACGTAGCTTTGATATGTTTTCCGGCATCCTTTACAAGCCCATCACTTGTGCATTTCTCTATGTTACATACTTTACAGATGGGTATATTATTTATACATATGtttttcaaaatatatttaaaaaataattcatCTATTTCATAAACATAATATCAAATGTAAATAAAGTGCATTTTAAATTTTACACCATATATTTCAATATATGACTTTACTGCAGGCCTAGCGTTGTGGGTGGGCCTTAGGGAGCCATGCTCGCCCTACCGCACCTCCTAGCCCGTCCAAATAAAATACATGGTTGAATGAAACTTTAC

Function

NR:

description
uncharacterized protein LOC110531085

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614359.2 True 1075 mRNA 0.44 4 31145534 31146912

Neighbor

gene id symbol gene type direction distance location
LOC110529228 LOC106571658 coding upstream 5063 31129510 ~ 31140471 (+)
LOC110529776 LOC106571659 coding upstream 47571 31055210 ~ 31097963 (+)
ndufb1 NA coding upstream 98113 31044027 ~ 31047423 (+)
LOC110529772 LOC106571664 coding upstream 267339 30809489 ~ 30878195 (+)
LOC118965506 NA coding upstream 480076 30655621 ~ 30665458 (+)
si:dkey-174m14.3 LOC106571655 coding downstream 10960 31157872 ~ 31204182 (+)
rad51b rad51b coding downstream 73243 31220155 ~ 31307462 (+)
LOC110529782 LOC106571730 coding downstream 192320 31339232 ~ 31343865 (+)
psmc6 prs10 coding downstream 221840 31368752 ~ 31376588 (+)
ddhd1b LOC106571651 coding downstream 234195 31381107 ~ 31393074 (+)
G695829 NA non-coding upstream 43181 31102028 ~ 31102353 (+)
G695828 NA non-coding upstream 43740 31101369 ~ 31101794 (+)
G695838 NA non-coding upstream 73001 31063787 ~ 31072533 (+)
G695826 NA non-coding upstream 91041 31054231 ~ 31054493 (+)
G695823 LOC106571660 non-coding upstream 94368 31050451 ~ 31051166 (+)
G695922 LOC106571654 non-coding downstream 64557 31211469 ~ 31216638 (+)
G695926 NA non-coding downstream 71801 31218713 ~ 31219120 (+)
G695989 NA non-coding downstream 197413 31344325 ~ 31344555 (+)
G695993 NA non-coding downstream 202300 31349212 ~ 31349433 (+)
G695995 NA non-coding downstream 203778 31350690 ~ 31351223 (+)
G694036 NA other upstream 1352787 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 2207261 28930668 ~ 28939888 (+)
G693207 NA other upstream 2439782 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 2587161 28495104 ~ 28605625 (+)
G692424 NA other upstream 3075306 28069900 ~ 28070228 (+)
G699605 NA other downstream 2980681 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 4307936 35454437 ~ 35462086 (+)
G700685 NA other downstream 4466252 35613164 ~ 35614666 (+)
G700864 NA other downstream 4757137 35904049 ~ 35904698 (+)
G702415 NA other downstream 5553526 36700438 ~ 36700739 (+)

Expression


Co-expression Network