ddhd1b (LOC106571651)


Basic Information

Item Value
gene id ddhd1b
gene name LOC106571651
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 31381107 ~ 31393074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612316.2
GGGAGGAGGAGCACGTAGTCTACCATTGTAATTATGTTGTAAGCAAGTCGCAGATAGGCATGCGAATAGAATAAGTGAACAGGTAAACCTACTGGCAGTGACAAAATGGGTCTCTGAGTAGTAGGATATCTATCAGCAATTTCAAAAAGTCTCCAATTTGGTAGCCTGTATCTGGGTACTGAGTGGATGAACCGGCTCAAAGATGGTGGCATTTACAATAATCAAGGAGGAGGTTTGGAAACCGTTAGTCCTGGACCTATGACTGTCAATCAAAGGTCAACAAGAGGCGCAGAAATAAATACGTTTGAGAACGTAGGCCATATTGTTTTTTAGGGAACAAGCTGttgattttttttgtcaagtGATGAGCAATTTTAAGGACATTAAGCCGACTACCCGTCGACTGAGCTCGGATAATAATTCCGTGAGCAGCAATGACTGGGATATGGCCAATGATGTGTTTGTGTCCTGCTACGAGGAACCGATGGGAGAGACTATACACGGGGAGATGGACTCGGTCCAGTCCGGCTTGGAAATGCACTTGCCTCCGCTGTTGCTAGGCGATCACCGTTTATCTCAAGACGGCATGATATTGGGCCTAGTGGGTGAAACTTACTCGGGCTATCACTCTCTCCCCGACTCAGGGACAGGCTATTTGGACATCACAAACGACCTGAAGTACACCGAAAGTGATGGGAGTGTGACTACAAAGAAGCGGAACCGCTCCAACAGTTCCAGACACCGCGGGGAGGTCGTCACCGAGCTGGGACCCGAGGAAGTGCGATGGTTCTACAAAGAGGACAAGAAAACCTGGAAGCCATTTGTTGGACACGACTCTTTGAAAATTGAAGTAATTTACCGTAGATTATGTGAACTAAACCCCTGCAAGGTGAAATGTCGCAATCATGCCACCGAACCAGAGAACCCCAGTGGGTCAGCCACGGGGTCCGAGGCCCAACCGGAGGATGTGGCGGAGGGGGGAGCTGTTCAGACGGATCCGGCAacaggagaaggggaaggtggaggggagggaggatacGAGACGGATGACATCGACCTGGATTCCATAAGTGTCAACGTTGAGGCTGTTTGCGTCAGAGGGGGTCTCTATGAAGTGGATGTCAAAGAGAAAGAATGTTACCCCGTCTACTGGAACCAGCAGGACCGTATTCCTGTGATGAGGGGCCAGTGGTTCATCGACGGCACGTGGCTTCCTCTGGAGGAGGACGAGAGTGACCTCATCGAGCTGGAGCACCTGGCCCGTTTTCGTGGCCACCAGATGAGGGAGATCTACGAGACTGCCACCGAGGCGGTGACCACCGCAGTGGACAGCAAGGACTGTAAAGTGGATGGACTCAATGCGATCCACAGTTTGAAACTGAGCCGAAGCCATGTGGACTGGCACAGTGTGGACGAGGTGTATCTCTACAGTGATGCCACCACCTCCAAGATCGCACGCACTGTCACCCAGAGACTGGGCTTCTCCAAAGCTGGCAGTAGTGGGACGCGTCTCCATCGGGGCTATGTGGAGGAGGCAGCGCCCGAAGACACACCGCCCGAAACAACACACATTGTCTTTGTGGTGCATGGGATTGGCCAGAAGATGGATGAGGGCCGCATCATCAGGAACACAAGCATGATGAGGGACGCTGCgaggaagatggaggagaagcATTTCTCCGATCGTTCCACAGAGCATGTGGAGTTCCTTCCTGTGGAGTGGAGGTCCAAACTGTGCCTGGATGGAGACACCGTGGACTCCATCACTCCAGACAAAGTTCGAGGACTCAGAGACATGCTCAACAGCAGTGCTATGGACATCATGTACTACACCAGCCCTCTGTACAGAGACGAGATCACTAGGGGTCTAACTCAGGAGCTGAATCGTCTATACACACTCTTCTGCATGCGGAACCCCGAGTTTGAGGAGAGTGGTAAGGTGTCCATCGTGTCCCACTCCCTGGGTTGTGTCATAACCTTCGACATCATGACAGGCTGGGACCCCGTACGCTTCCATCATGAAGAACTATCGCCGGAGCCAAAAGAGATGCAAGAGTGCTGGTCAAGCTATCAGGAACGTCACCTACAAGAGGAGCTGAGACTCACACGACTCAGGTTACGGGATTTGGAAAATCAGTTTGCTGGTTTGCAATCCCCATCATCTGAAGGTTCTTCTTCAGCCTTGAAATTTAAGGTGGAGAACTTCTTTTGCATGGGTTCTCCCCTGGCCGTGTTCTTGGCGTTGCGAGGGATCCGACCGGGGAACAACGTGACCCAGGATCACATCTTACCCAAATCCATCTGCCAACGTCTCTTCAACGTCTTTCATCCTACCGACCCTGTGGCGTACCGATTGGAGCCCCTAATCTTAAAGAACTACAGTAACATTTCACCTGTCCAAATACACTGGTATAACACAAGTAGTCCGACTCCGTACGACCAGATCCGTCCCACGCTTCTCAACCCTGCACTGAAGGAAAGTGCATCTGTCTCGGACACAGAGAGCCTCCCTAGCCCCTGTACCTCCCCCCCTCAGGCCCGAAGACACTACGGAGAGTCCATTACGAACTTGGGGAAAGCCAGTAttatggGCGCGGCAAGTCTCGGCAAAGGCATCGGCGGGATCTTCTTCTCCCGCTTCTCGCGCTCAAGTGGTCACGTGGGCGGCGTGGAGGAGGAGCCTTCCGACTCGGAGGGCGGGGTCTTAGAGGTGGATAATGCCGTGTCAGGGGAGGAGGGCGTGGCTGCGGAGTTAGTGGAGAAGTTAGCGGTAGTCGAGGAGACGAGAGAAATAGAGCACTCCATGTCTCGTTCCACCTCGGCTATCCTGGACAACACCACATTGGAGTTGGAGAGGCGTATTGACTTTGAACTGCGAGAGGGCATGGTGGAGAGCCGCTATTGGTCGGCGGTGACCTCTCACACTGCCTATTGGTGTTCACACGACGTGGCACTGTTTCTTCTCACTTTCATGTACAGACAGGAGTATCCCACTCAGCTCTCTGAGGATAACCCAGAGTTATCCTAACCcacagccaacacacacacaaacacacccacttGATCTTGCAACCAGACCgaggagacatgtctgtgtgtcagagacCACTCCACAGCCTGTGGTCAGCTGGTGGTGATCTCGTCAGAGACCGTTCCCTTTACCCTACGGGTTCTAATAGTGACTGTTCCTCTAATGTTCCCAATGCTGTCAATTCATCCACCCCTGTGGGTTTATTGAATACCGTCTCCCCTCCAAAGCACCCACCAACCCCAATTAAGACTGTTCCTCTTTCCTGTGACCGTAAATGATGACTGTGTCTCTTGGACTGTGTTGGTGTCGGACACAGCTTTGACTCGGTCTGTGTGACTCCTGAAACTGTAGCCATGGCTCAAGCCTAACCTCTCTCAACTCTGAGCATCAACACTCATTCAGATGTTTAGCCTGTTGAGAGAGTTACATTCAAATCCATCCTTTCATGGTCTGAATGCCTCAGAGAAGCACACTGAAACCCGTTCAATTGCATCGTTTGATTTCAACCCGTCAGGTCGATCAAAGTGGATTGTTATGGAAGGGTTGAAGTAGCCAGACGGAAACACTGCACTCACCATTGTTTTATCCGTTCAGTTTAACCTGGCTAGGGTTAAAGCCAAATGAATGATGATGACATTGGATGGAGCATACTTAGACTAAATGAAATGCAGCTCTATACACTAACTGTACTGCTGCGACGATGCGTGGAGTCGCCAAATTATGTTTACACTAACTGACTAACTGCAAGACTAGGCTGAAAGATACTAATGTTAGATACACAACTTGAACAAAGTTGCCAAATACAGTTTTTGTTTAGCTCTCTCTTATAACAGTGGCAGGTTCGGTCGGTTTTGCTGGTCCATAGGAAGGCCGGCCGAATTGCTTTGTTCTATTGTGAATTGTCTTGTTCGAAAAGAGCACTCCATTTGTAATACTAACACTGACATGTTGCACATATACGGTAGCTTTAAAAAAAATTTGGCACTTTCTAGTCAGGCAACGAACAGAGATACGACATATCggtaaaacaacagtaaaacacacacatgaaGGACTCAAAATGTTTCATGTGCATCCATTGATCTGaaacagagtagcagtagagAAGTCTGCAGAGTACACTCCTTACAATTCTAACACTTGATTTAAATCAATAACTATTCGGGCCAAAATGAAAAGGAAGCATGATGTGCAGTATGTATGTAGACAGGGATGAATATGCTCTGCTTAAGATTGTCTTACTAGTAGTGGGGGATTGTAgcatgccacattgaaagtcacctGGAGGGTTCCTCCATgattttttaaagtaaaaaaaaacaaacaaatgtattACACTAATACAGAGTGACATCACTCAAATTGGATCTCTGCCATAATCAAGGATCAATCAAGCTTGCCATCaggaagttttttttaaatatgtttggTGTCATGTATTTTGTACACAGTATGTGTTaagagtttgcctttttgccgtCTTGTGAATGTTTGCTGTTTAAGTTCTCCTCAGATGTGTTTGAGTCCATCCCTTGTTAAGTCATACTGTCAGATTCCCAGGTATGCTACTGTGTCATCCCGTTGCGTCTGCGCTTACAAATGCCTGATTCACACTATATGGCCGAGCGGAACTGTACTGTGCTGGCACAGAtattttcttttcactttgtccttTCTAGCGTCATTCCAGCAACTATGGTGTATACGTTACCAGGCCAGTTCCAATACAGCTTGGTTAAgtttggctcagtagtgtgaaaagagGATTTAGAGGATTTTGTTTGTGCTTCACTCCTTGGTTTTGCATATCCTTGTTTACATGTCACACTGTCACTGTTACACTCAAACATAGCAAGCTGATACCTCCTTCTTCCTTATGTTACAACTTACCCATTCATGTGCCATAATGTGTAACTGACATAGATATCTTCTCTtaattgtgcatagagttgtcaTTCAAGGCTAAATGTACTGTACCCTAAGGGCATTGAATTGTGATTGATTGTGTTGTGGGTAGTCCATTCTTCAGCTATACTCCCATTTGCCTTGCACTAGAGGACATGTTTCCACTTACTGCCCAATCCACTGTcatgctcattgctcactcttTTTAACCTGTGTTTTGTTCAAATGAATGACGTAATGCTTAACCTTGGTAACCCTTTTGTTATACATTAAAATGTATCtctacagct

Function

NR:

description
phospholipase DDHD1-like

GO: NA

KEGG:

id description
K13619 DDHD1; phospholipase DDHD1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612316.2 True 5226 mRNA 0.48 13 31381107 31393074

Neighbor

gene id symbol gene type direction distance location
psmc6 prs10 coding upstream 4519 31368752 ~ 31376588 (+)
LOC110529782 LOC106571730 coding upstream 37242 31339232 ~ 31343865 (+)
rad51b rad51b coding upstream 73645 31220155 ~ 31307462 (+)
si:dkey-174m14.3 LOC106571655 coding upstream 176925 31157872 ~ 31204182 (+)
LOC110531085 NA coding upstream 234195 31145534 ~ 31146912 (+)
stxbp6l LOC106571649 coding downstream 1120 31394194 ~ 31402564 (+)
LOC110529230 LOC106571642 coding downstream 157325 31550399 ~ 31573573 (+)
LOC110529794 LOC106608176 coding downstream 558018 31951092 ~ 32110879 (+)
LOC118965508 NA coding downstream 742122 32135196 ~ 32141382 (+)
LOC110529798 LOC106571640 coding downstream 759627 32152701 ~ 32156250 (+)
G696000 NA non-coding upstream 20502 31360356 ~ 31360605 (+)
G695999 NA non-coding upstream 21565 31359155 ~ 31359542 (+)
G695995 NA non-coding upstream 29884 31350690 ~ 31351223 (+)
G695993 NA non-coding upstream 31674 31349212 ~ 31349433 (+)
G695989 NA non-coding upstream 36552 31344325 ~ 31344555 (+)
G696423 NA non-coding downstream 85592 31478666 ~ 31478902 (+)
G696427 NA non-coding downstream 90583 31483657 ~ 31483896 (+)
G696416 NA non-coding downstream 93716 31486790 ~ 31560546 (+)
G696476 NA non-coding downstream 141295 31534369 ~ 31539339 (+)
G696552 NA non-coding downstream 188282 31581356 ~ 31581565 (+)
G694036 NA other upstream 1588360 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 2442834 28930668 ~ 28939888 (+)
G693207 NA other upstream 2675355 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 2822734 28495104 ~ 28605625 (+)
G692424 NA other upstream 3310879 28069900 ~ 28070228 (+)
G699605 NA other downstream 2734519 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 4061774 35454437 ~ 35462086 (+)
G700685 NA other downstream 4220090 35613164 ~ 35614666 (+)
G700864 NA other downstream 4510975 35904049 ~ 35904698 (+)
G702415 NA other downstream 5307364 36700438 ~ 36700739 (+)

Expression


Co-expression Network