stxbp6l (LOC106571649)


Basic Information

Item Value
gene id stxbp6l
gene name LOC106571649
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 31394194 ~ 31402564 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036985286.1
CTCAAATGGGATGGCGTCCCAGACAGATTCGCCTTCTCCGCAAGGCTTGCtgttgttgtgtgacaaaacaacaCCGCTATAAGGCGTTGGAATAGTTTGGGTGAGCATTACTGCAGCTTCCCTGTTTCTGCGTCTCGAAGGAGTGAGGGGTAAAACAACAAAACAGATCACTCATCCAATATCCTCCACCCAGTCCCACCATGAATATCCAGTCCGCTATCAACAGGGCGGTGTTTGCTCCCCGGGATGAGAGGATGCTAGTGGCTGTGGAGGTGAAGAGGAGAAAAAGGAAAAGGGTCCCCTTTCTACCCACTGGAGGCAAGGGAGAATACATGACATACATCTGTTTGTCAGTGACCAATAAGAGGCCAGCTCAGCTCCTCATCACCAAAGTCAAGCAGTTTGGGGGCTCCGCCCCCTTCACCAGAAGGTCACAGTGGGCCGTGGAGCAGCTTCGCCAGGTCAACGGCATCAACCCCAACAAGGACTGCCCAGAGTTTGACCTGGTGTTCGACAACGCCTTTGACCAATGGGTGGCCAGCTCAGCGCCAGAGAAGTGCATCTTCATCCAGATCATGTACCACGCCTGTCAGACCTATTGGGAAGGCAAGGAGGGGGTCCCTGGTAGCCCAGCCGGGGACCAGCAGAAGGGGCAAAGAGGTCAAGGGGGCCAGGGTAGCCCAGGGGCCCAAGGGGGCCAGGGTAGCCCAGGGGCCCAAGTGGGCCAGATAGGAGGACCAGTGGCCCAGGCTAGACGGAAGAGCACTGTGGGTCCCAGGCCCCATCATACTGAGTTTGTCAACTGTCAGTCCAAACTCACAGGAGATGCCTGCAAAATGAATCTGGTCCTGTACCGTTGCAAGGTCTTTTTCAATCGCATGAAGAAGGTGATGGTTTCAAACCAAAGCCGTTCTCAGGCTGGAGGTCCTAGAGCAGGACCCAGTGGGCAGcgccctccagggggcagtatgGGTAGTGTAGTCCAGAGGGCCAGCCAGGCCCTGCAGGAGCGTGGGGAGAGACTGGGCCGGGCTGAGGACAAGACGGTAGACCTAATGCACAAAGCCCAGCAGTTTGCAGACACTGCTCACAAGCTGGCTCTGAAGTATTCAAACTAGAGGCATATCTTCCCGTGGAACCGCTCCTggagtctttggcctgaattgaCTTGTTAATTCTATGTAATAACATTTTTACTAATCTTTGACTGAGTTGAAACTAATGGACTAATGTTGGACTGAGTTGAAACCAAGTGGTCACACTGCAATTCCTCTGTGAAGAGTCCTGTCTAGTACTGGGTTATTGCGCTTGCTATTAGGACTTAGACTGTGGACAAGCAACTGTCACTTGTGTCAGAAGGACTTTAAAATGTTTACAGGTGGGGAGGACGGCCCAgttatggacccccccccccccccaggattaAAGAATGACCTTTCACCTCTAGAACAGGACCTGTGGTGTCCTTTCATGGGATAGAGTTTGTATACTGGATGGCAATGTAGTGTCACAATGCTCCCACTGTTTGAGTGTACATGTCTTCCCTGCTTCAGTAGCCTCTTCTCTGATAACAACGATTTTAGATTGTATTGATTAACTTTTGTGTTGTGCGGTTTTAGATATCTTAATATAGATTCATGAATTCACACAGTGAACAGCTGACAAGTGAAGTTGAGAACCTACGTGTCTCCACGAtgaatgtatttctgtttttttttgttttttttgctcatTGCATAAATTATTGCTCATTTATGACTGAATAGGCACACacaaagagcagcttgtgaataTTGGCACGAACCGATGCAACTCGGGTTGCAAATATATTCCTGGTGTTATTATTTTCCAGATTTTTtatctctgcgttgttgggaagggcctgtaaggaagcatttcactgttagtctgcacCTGTATACGAAGTATGTGACGCAACCATTTTGTAGATTTCTTTTTTACAAATTGCACTTTCATTGAATGTTTGAATGGCATTGAATGCATAAGTGTGGCTCTTAAGGTTATTGTCTTCATGGTTGTCAGAGCAGGTGCAGGGGAACAAGGAACACCTGGCGAAATCTTTTCTTTGCATGATTTTGTAATGGTCTTGATTTCTTTGCTCTTTCTAAAGTGGAATATGCACACATTTGCTTTCAGTTTTTTTCCATGCTCAATTCCTCCAGTGCCCTTTCCCTGCTTGTATCAAAACCATTGATTAGTCACCAATCACTGTTCCAAATTCTAGTTAATTTTCCTATTTGATCCTTGCTCTTGTCTTTGTCTAATCGTGTTTGATTAATTGATCCCCTGAATTGTCACTGTCTTGTCACGTATGTCATCTGTTTTTGTCTCTTGTGCCATATCTACATGTATGCTGGTTCCATGTGAAAAGATTTGAGTGTAGCAGTTGGAATGGTGGGTTCATGTATGTAGACCAGGTCTCTTCTAGGTGAGGTCATAGGGAAGGTATTTAGTGTTGACGTGTGATGCACGTCCACTCAGCCGGCTCAATGCGGTAGCAAATTGATCCCGGGGACGACGTTGGTGTGATGAAGTTTCTGATTAACACTGTATAGATACCGTGGAGTTGGCTAGTGATGAGGAGACTGGTAGAGATGAGATGGTTCAGTTGGTTAGTGATGAGGGTTCGTTAGGATGAAGGTGTAGTTTTGATGCCCAGTGATAATGTTTTTATTCTACACACTACAGACAGTTTTGGgatggagttttcctttaaactCTTACCTTTTGGTATTTTTTTTCCATTAGTCCATTGACATAGTTTCCATGTTTTTGCTTGTCAGCTATCAAGTTTTCTAGATATCGAACTTTAAAAACACAAATCATCCCTGAATGAGGCTTTTTGTGTCATATGATGCAGCAACAGAATGAAAATTGCATATCTTGAACTTGATTGCTGACGAGCAAAACATTTTGAGACCGTTAACAATGGACCAATGAAACAAACACCGAAAGACCGTTTttggggtggagttttcctttaattgAAATGCTTTAGCAGCTGGGGCAGTATGTCCCTCCTTTATGCTAAACGTCTCCCAGAAAGTGAGAGGGTCGTCTTACCTCTGTCTTCAGAGTACTCCTATTAGAATGACGCTTATTCTGTCGGCTAACTGTCAGGAGTGGAATCCAAAGAGGCCGCTTGTCGTAACTGCATGTTTTCTGTTGCTATGTTACTGCTGTGGCAAAATATGGGTTAGAATCTAAATGAATTGTCCAAGAAGAGTGCCTtactacctttttttttttttgtatagcCTGATCGTGGAGTTAAACCCTGTACTGACGTCTGTTTTATTGTTCCTAGCAATGCAGAGTATTTAACATTGCCTTATACTACAGCGCTTCAAGTACTGTTTTACGTGTAAATGAGATTTCTTGTACTGTCTTTAATGAGAAGAAGAGCAATGACCTTAACACTCCTTTTTTTTTGAGCTAATAAATGAAATGGGACCCA
>XM_021612319.2
TCAAATGGGATGGCGTCCCAGACAGATTCGCCTTCTCCGCAAGGCTTGCtgttgttgtgtgacaaaacaacaCCGCTATAAGGCGTTGGAATAGTTTGGGTGAGCATTACTGCAGCTTCCCTGTTTCTGCGTCTCGAAGGAGTGAGGGGTAAAACAACAAAACAGATCACTCATCCAATATCCTCCACCCAGTCCCACCATGAATATCCAGTCCGCTATCAACAGGGCGGTGTTTGCTCCCCGGGATGAGAGGATGCTAGTGGCTGTGGAGGTGAAGAGGAGAAAAAGGAAAAGGGTCCCCTTTCTACCCACTGGAGGCAAGGGAGAATACATGACATACATCTGTTTGTCAGTGACCAATAAGAGGCCAGCTCAGCTCCTCATCACCAAAGTCAAGCAGTTTGGGGGCTCCGCCCCCTTCACCAGAAGGTCACAGTGGGCCGTGGAGCAGCTTCGCCAGGTCAACGGCATCAACCCCAACAAGGACTGCCCAGAGTTTGACCTGGTGTTCGACAACGCCTTTGACCAATGGGTGGCCAGCTCAGCGCCAGAGAAGTGCATCTTCATCCAGATCATGTACCACGCCTGTCAGACCTATTGGGAAGGCAAGGAGGGGGTCCCTGGTAGCCCAGCCGGGGACCAGCAGAAGGGGCAAAGAGGTCAAGGGGGCCAGGGTAGCCCAGGGGCCCAAGGGGGCCAGGGTAGCCCAGGGGCCCAAGTGGGCCAGATAGGAGGACCAGTGGCCCAGGCTAGACGGAAGAGCACTGTGGGTCCCAGGCCCCATCATACTGAGTTTGTCAACTGTCAGTCCAAACTCACAGGAGATGCCTGCAAAATGAATCTGGTCCTGTACCGTTGCAAGGTCTTTTTCAATCGCATGAAGAAGGTGATGGTTTCAAACCAAAGCCGTTCTCAGGCTGGAGCAGGTCCTAGAGCAGGACCCAGTGGGCAGcgccctccagggggcagtatgGGTAGTGTAGTCCAGAGGGCCAGCCAGGCCCTGCAGGAGCGTGGGGAGAGACTGGGCCGGGCTGAGGACAAGACGGTAGACCTAATGCACAAAGCCCAGCAGTTTGCAGACACTGCTCACAAGCTGGCTCTGAAGTATTCAAACTAGAGGCATATCTTCCCGTGGAACCGCTCCTggagtctttggcctgaattgaCTTGTTAATTCTATGTAATAACATTTTTACTAATCTTTGACTGAGTTGAAACTAATGGACTAATGTTGGACTGAGTTGAAACCAAGTGGTCACACTGCAATTCCTCTGTGAAGAGTCCTGTCTAGTACTGGGTTATTGCGCTTGCTATTAGGACTTAGACTGTGGACAAGCAACTGTCACTTGTGTCAGAAGGACTTTAAAATGTTTACAGGTGGGGAGGACGGCCCAgttatggacccccccccccccccaggattaAAGAATGACCTTTCACCTCTAGAACAGGACCTGTGGTGTCCTTTCATGGGATAGAGTTTGTATACTGGATGGCAATGTAGTGTCACAATGCTCCCACTGTTTGAGTGTACATGTCTTCCCTGCTTCAGTAGCCTCTTCTCTGATAACAACGATTTTAGATTGTATTGATTAACTTTTGTGTTGTGCGGTTTTAGATATCTTAATATAGATTCATGAATTCACACAGTGAACAGCTGACAAGTGAAGTTGAGAACCTACGTGTCTCCACGAtgaatgtatttctgtttttttttgttttttttgctcatTGCATAAATTATTGCTCATTTATGACTGAATAGGCACACacaaagagcagcttgtgaataTTGGCACGAACCGATGCAACTCGGGTTGCAAATATATTCCTGGTGTTATTATTTTCCAGATTTTTtatctctgcgttgttgggaagggcctgtaaggaagcatttcactgttagtctgcacCTGTATACGAAGTATGTGACGCAACCATTTTGTAGATTTCTTTTTTACAAATTGCACTTTCATTGAATGTTTGAATGGCATTGAATGCATAAGTGTGGCTCTTAAGGTTATTGTCTTCATGGTTGTCAGAGCAGGTGCAGGGGAACAAGGAACACCTGGCGAAATCTTTTCTTTGCATGATTTTGTAATGGTCTTGATTTCTTTGCTCTTTCTAAAGTGGAATATGCACACATTTGCTTTCAGTTTTTTTCCATGCTCAATTCCTCCAGTGCCCTTTCCCTGCTTGTATCAAAACCATTGATTAGTCACCAATCACTGTTCCAAATTCTAGTTAATTTTCCTATTTGATCCTTGCTCTTGTCTTTGTCTAATCGTGTTTGATTAATTGATCCCCTGAATTGTCACTGTCTTGTCACGTATGTCATCTGTTTTTGTCTCTTGTGCCATATCTACATGTATGCTGGTTCCATGTGAAAAGATTTGAGTGTAGCAGTTGGAATGGTGGGTTCATGTATGTAGACCAGGTCTCTTCTAGGTGAGGTCATAGGGAAGGTATTTAGTGTTGACGTGTGATGCACGTCCACTCAGCCGGCTCAATGCGGTAGCAAATTGATCCCGGGGACGACGTTGGTGTGATGAAGTTTCTGATTAACACTGTATAGATACCGTGGAGTTGGCTAGTGATGAGGAGACTGGTAGAGATGAGATGGTTCAGTTGGTTAGTGATGAGGGTTCGTTAGGATGAAGGTGTAGTTTTGATGCCCAGTGATAATGTTTTTATTCTACACACTACAGACAGTTTTGGgatggagttttcctttaaactCTTACCTTTTGGTATTTTTTTTCCATTAGTCCATTGACATAGTTTCCATGTTTTTGCTTGTCAGCTATCAAGTTTTCTAGATATCGAACTTTAAAAACACAAATCATCCCTGAATGAGGCTTTTTGTGTCATATGATGCAGCAACAGAATGAAAATTGCATATCTTGAACTTGATTGCTGACGAGCAAAACATTTTGAGACCGTTAACAATGGACCAATGAAACAAACACCGAAAGACCGTTTttggggtggagttttcctttaattgAAATGCTTTAGCAGCTGGGGCAGTATGTCCCTCCTTTATGCTAAACGTCTCCCAGAAAGTGAGAGGGTCGTCTTACCTCTGTCTTCAGAGTACTCCTATTAGAATGACGCTTATTCTGTCGGCTAACTGTCAGGAGTGGAATCCAAAGAGGCCGCTTGTCGTAACTGCATGTTTTCTGTTGCTATGTTACTGCTGTGGCAAAATATGGGTTAGAATCTAAATGAATTGTCCAAGAAGAGTGCCTtactacctttttttttttttgtatagcCTGATCGTGGAGTTAAACCCTGTACTGACGTCTGTTTTATTGTTCCTAGCAATGCAGAGTATTTAACATTGCCTTATACTACAGCGCTTCAAGTACTGTTTTACGTGTAAATGAGATTTCTTGTACTGTCTTTAATGAGAAGAAGAGCAATGACCTTAACACTCCTTTTTTTTTGAGCTAATAAATGAAATGGGACCCA

Function

NR:

description
syntaxin-binding protein 6-like

GO:

id name namespace
GO:0016192 vesicle-mediated transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036985286.1 False 3478 mRNA 0.45 7 31394194 31402564
XM_021612319.2 True 3480 mRNA 0.45 7 31394195 31402564

Neighbor

gene id symbol gene type direction distance location
ddhd1b LOC106571651 coding upstream 1120 31381107 ~ 31393074 (+)
psmc6 prs10 coding upstream 17606 31368752 ~ 31376588 (+)
LOC110529782 LOC106571730 coding upstream 50329 31339232 ~ 31343865 (+)
rad51b rad51b coding upstream 86732 31220155 ~ 31307462 (+)
si:dkey-174m14.3 LOC106571655 coding upstream 190012 31157872 ~ 31204182 (+)
LOC110529230 LOC106571642 coding downstream 147835 31550399 ~ 31573573 (+)
LOC110529794 LOC106608176 coding downstream 548528 31951092 ~ 32110879 (+)
LOC118965508 NA coding downstream 732632 32135196 ~ 32141382 (+)
LOC110529798 LOC106571640 coding downstream 750137 32152701 ~ 32156250 (+)
LOC110529799 LOC106571639 coding downstream 760757 32163321 ~ 32166068 (+)
G696000 NA non-coding upstream 33589 31360356 ~ 31360605 (+)
G695999 NA non-coding upstream 34652 31359155 ~ 31359542 (+)
G695995 NA non-coding upstream 42971 31350690 ~ 31351223 (+)
G695993 NA non-coding upstream 44761 31349212 ~ 31349433 (+)
G695989 NA non-coding upstream 49639 31344325 ~ 31344555 (+)
G696423 NA non-coding downstream 76102 31478666 ~ 31478902 (+)
G696427 NA non-coding downstream 81093 31483657 ~ 31483896 (+)
G696416 NA non-coding downstream 84226 31486790 ~ 31560546 (+)
G696476 NA non-coding downstream 131805 31534369 ~ 31539339 (+)
G696552 NA non-coding downstream 178792 31581356 ~ 31581565 (+)
G694036 NA other upstream 1601447 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 2455921 28930668 ~ 28939888 (+)
G693207 NA other upstream 2688442 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 2835821 28495104 ~ 28605625 (+)
G692424 NA other upstream 3323966 28069900 ~ 28070228 (+)
G699605 NA other downstream 2725029 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 4052284 35454437 ~ 35462086 (+)
G700685 NA other downstream 4210600 35613164 ~ 35614666 (+)
G700864 NA other downstream 4501485 35904049 ~ 35904698 (+)
G702415 NA other downstream 5297874 36700438 ~ 36700739 (+)

Expression


Co-expression Network