LOC110529799 (LOC106571639)


Basic Information

Item Value
gene id LOC110529799
gene name LOC106571639
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 32163321 ~ 32166068 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612334.2
TTGTCAATTGTCTCGACTTGCCACAGTCAGCTTTGGGAGCGCCTATCCCAAGCTACTCGGCCTGTGAATTTGCCTGGTGTCAATTTGGTCTTTCACTGCAAAATGACAGAAAAAGGACTTACAGATGAGGCTGTGTCCGCAGCGTGCAAAGAAGGGGACCCTATCACCCAGgATTACATGTTGCAGCAAACTATGCTGAGGGTGAAAGACCCACTCAAGTCTTTAGACTTCTACACACGCATCATGGGCATGACGTTGCTTCAGAAAATAGACTTCCCATCAATGTGCTTCACACTCTACTTCCTGGGTTATGAGGAAAAGAAGGAAATCCCTGCAGACATAAAGGACAAAACAGCATGGACTTTCTCCCGACGAGCCACCATTGAACTCACACACAACTGGGGCTCTGAATCAGATGAAAATCTATCTTATCACAACGGAAACGCTGAGCCAAAAGGTTTTGGGCACATCGGAATTGCTGTACCTGATGTTTATGCAGCCTGCAAAGTATTTGAAGAAAAAGGAGTAACATTTGTTAAGAAGCCAGATGATgGTAAAATGAAGGGACTGGCCTTTATACAGGATCCTGATGGATACTGGATTGAGATTTTGAGTCCAAACAACATGTTCACCGTAACGTCATCCAAGCGTCAAACTGAGATAGTACAAACTGACTTGGTCAGAAAAAGGATGTGATGAAAAAGTAAGAGAGAAATTGGAGGAACCAAAGGGATGTGAGGAAATTAAGAGGTGAAGATTGAGTATTTGCTTACGATTGGGATCACATACAGATACCCGCTGAAGGCCTacttaaaataacaatagcggaaGTATATTTTAATATTTTACAAATACACTGACGTATACTTAAATATACTACAAGTTCATATAATATACTGCAAATACGAGATATACTTTTCTAGTATATCTTAGgtgtactatacatattatatcATTACACTTCAATCCAATTTTTACAAGTGTACTTAAAATGCATTGATTTTCAGTCTTTAAACTATATGTTACCTATCATTACACTTAACACACTTATtacaattgtatttttaattaattgttttcAGTGTTTTATTATACTATATGTTCATTATCATTACACTTAAACACACTTACAAATACTTCATATACTTTAATTGTACTTTAGTATATTCATTAAAAATACACTTAGAGTTGTTTTTAA
>XM_021612335.2
GCCACAGTCAGCTTTGGGAGCGCCTATCCCAAGCTACTCGGCCTGTGAATTTGCCTGGTGTCAATTTGGTCTTTCACTGCAAAATGACAGAAAAAGGACTTACAGATGAGGCTGTGTCCGCAGCGTGCAAAGAAGGGGACCCTATCACCCAGagTTGCAAGCTGAGAACATAGCTGAGAAGTAAGGGGGTCAAGACATATTTTGCAAGCAACAACTCGTCCCGACActcccccttcttctctctgtctccctctgtccctccccaggATTACATGTTGCAGCAAACTATGCTGAGGGTGAAAGACCCACTCAAGTCTTTAGACTTCTACACACGCATCATGGGCATGACGTTGCTTCAGAAAATAGACTTCCCATCAATGTGCTTCACACTCTACTTCCTGGGTTATGAGGAAAAGAAGGAAATCCCTGCAGACATAAAGGACAAAACAGCATGGACTTTCTCCCGACGAGCCACCATTGAACTCACACACAACTGGGGCTCTGAATCAGATGAAAATCTATCTTATCACAACGGAAACGCTGAGCCAAAAGGTTTTGGGCACATCGGAATTGCTGTACCTGATGTTTATGCAGCCTGCAAAGTATTTGAAGAAAAAGGAGTAACATTTGTTAAGAAGCCAGATGATgGTAAAATGAAGGGACTGGCCTTTATACAGGATCCTGATGGATACTGGATTGAGATTTTGAGTCCAAACAACATGTTCACCGTAACGTCATCCAAGCGTCAAACTGAGATAGTACAAACTGACTTGGTCAGAAAAAGGATGTGATGAAAAAGTAAGAGAGAAATTGGAGGAACCAAAGGGATGTGAGGAAATTAAGAGGTGAAGATTGAGTATTTGCTTACGATTGGGATCACATACAGATACCCGCTGAAGGCCTacttaaaataacaatagcggaaGTATATTTTAATATTTTACAAATACACTGACGTATACTTAAATATACTACAAGTTCATATAATATACTGCAAATACGAGATATACTTTTCTAGTATATCTTAGgtgtactatacatattatatcATTACACTTCAATCCAATTTTTACAAGTGTACTTAAAATGCATTGATTTTCAGTCTTTAAACTATATGTTACCTATCATTACACTTAACACACTTATtacaattgtatttttaattaattgttttcAGTGTTTTATTATACTATATGTTCATTATCATTACACTTAAACACACTTACAAATACTTCATATACTTTAATTGTACTTTAGTATATTCATTAAAAATACACTTAGAGTTGTTTTTAA

Function

NR:

description
lactoylglutathione lyase-like isoform X1

GO: NA

KEGG:

id description
K01759 GLO1, gloA; lactoylglutathione lyase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612334.2 False 1198 mRNA 0.37 6 32163321 32166068
XM_021612335.2 True 1293 mRNA 0.38 6 32163340 32166068

Neighbor

gene id symbol gene type direction distance location
LOC110529798 LOC106571640 coding upstream 7071 32152701 ~ 32156250 (+)
LOC118965508 NA coding upstream 21939 32135196 ~ 32141382 (+)
LOC110529794 LOC106608176 coding upstream 52442 31951092 ~ 32110879 (+)
LOC110529230 LOC106571642 coding upstream 589748 31550399 ~ 31573573 (+)
stxbp6l LOC106571649 coding upstream 760757 31394194 ~ 31402564 (+)
LOC110529801 LOC106571636 coding downstream 6144 32172212 ~ 32193704 (+)
LOC110529803 LOC106571638 coding downstream 28139 32194207 ~ 32214087 (+)
LOC110529800 LOC106571632 coding downstream 50508 32216576 ~ 32255838 (+)
LOC110529802 ppp1cb coding downstream 90250 32256318 ~ 32268368 (+)
grcc10 cssa15h12orf57 coding downstream 121096 32287164 ~ 32289011 (+)
G697204 NA non-coding upstream 15355 32147566 ~ 32147966 (+)
G697196 NA non-coding upstream 31574 32126449 ~ 32131747 (+)
G697191 NA non-coding upstream 42357 32120760 ~ 32120964 (+)
G697188 NA non-coding upstream 45305 32117785 ~ 32118016 (+)
G697214 NA non-coding downstream 1043 32167111 ~ 32167338 (+)
G697215 NA non-coding downstream 1387 32167455 ~ 32167671 (+)
G697217 NA non-coding downstream 2512 32168580 ~ 32168796 (+)
G697221 ypel5 non-coding downstream 48381 32214449 ~ 32217565 (+)
G697242 NA non-coding downstream 58621 32224689 ~ 32225047 (+)
G694036 NA other upstream 2370574 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 3225048 28930668 ~ 28939888 (+)
G693207 NA other upstream 3457569 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 3604948 28495104 ~ 28605625 (+)
G692424 NA other upstream 4093093 28069900 ~ 28070228 (+)
G699605 NA other downstream 1961525 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 3288780 35454437 ~ 35462086 (+)
G700685 NA other downstream 3447096 35613164 ~ 35614666 (+)
G700864 NA other downstream 3737981 35904049 ~ 35904698 (+)
G702415 NA other downstream 4534370 36700438 ~ 36700739 (+)

Expression


Co-expression Network