LOC110529815 (LOC106571624)


Basic Information

Item Value
gene id LOC110529815
gene name LOC106571624
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 32540258 ~ 32544145 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612364.2
tacacatgggataaacaaacgtacagtcaagaacacaatagaaaagcaaaaaaatagtcagtagtggcgaaataattacaatttcgcaaaataaacactggagtgatagatgtgcagaagatgaattgTATTGCCGTTAGTGGGCCTAGTCCAAGGGACTGGAAGAGATCATTAAGTGGTGATTGCCATCAAACCTATTGACTCTTATATTGCCTCTTATTTCAATATACTGGACTTGTCTGATTTAACTAGAATATTGTTAAAAAGTACATAGATCAGAAACCCTTGCGTTCTGATAATGGATAAGAGTGCCCAGTGCATCCCAGACTTGTGCCTACACAGTGTTGATGCTGATACACCACCTGCCTGTCACGAGAAAGAGCAGGTGGACAAAATGGCTTTGCTGATGCAGGACTTCGTTGGAAATATACCCGAGATAACAGATCCAGACGAGAATCAAAACTTTGGGTACCAGTGTATTACGGAGACTAATAGACCACTTGTTGAAATGGACAATGGAGTGATGGGTCTTGGATTTTATAATGGTAGCCAACCAAGGGATGTCTCAGGAAATGCAAATGATGATCAAAAGCATATGTCATCAACACATTGTAATACCCCACAGCTCAACAAAGAGCAGCCCTGTTCAATAGAGCGCGATGCGGTAGAGGACAATTGCCGCGCACAGGCTGACGTGGCGCACAGCCTGGGATATTCCCTCTGCTGCCTGGATGACGAAACGCAAGCACAGAGCACCCCTCTCGTGTATGAAGTCAGCGGAGGAGCTGTGAAATATCACTGTCTGATTGATAAAGCGAGTTCCCAGGTGGAGCATAAGGAGGGGAGCTCTGCGTCTGTCACCTATTGTATCGCTGCAGAAGCGCTGACAACACATCAGCGCGGACAGACAGGCAGTGCgggacagaatgctgtgtggggAGAAAGCGACCCAGACACTACACAGGGAAACTCAGCACTGCAGTCGAGGCAGGAAGGATGTGGATATGGAAACAGAGTCTTTGCTTCTAAAGAGGAGACGGATTTAGTGATTGAAGTGTCTGGAAAGAAACTTGAAGCGCATAAAGCAGTTTTGGCAGAGAAAAGTGACTATTTCAAGGCGCGGCAGTCCCGAGACGTATTGCGAGTGAAGGGGGTGAGTTTTAAGACTTTGACCATTTTGGTGGATTACATTTACTCATGCCGAATGGAGGTTAGTAAGGATAATATTGTAGAGGTCATCACCGGAGCTAAAATATTACAAATCCCCTGCGCGGTTCAAGCTGCTCTCGATACAATGTCGGAGCAGATTACCGCCGAGAACTGCTATGAGATTTTGACAATAGCCAAAAAGCAACGTCTCAGCGAGTTGAAGGAGAAAGCCTACAAGTACATGAGTGACAATTTCTTGCAAATACTGCGGGATCCCGGTGTCTATGGGCGTTTGACCGGAGGGGAGAGAGAACTAATTATCACCAGGAGAATGGAGGGAAAGAGGGCGTTGATGGTGGCTGAAATCAACGAGGTGTATGACGGCGCCGGGAGCAGACCTACAAGTCGTGAGAACAGTCGCCCTCAGAGCCCTCTATCCATAGTGTCCCTGAATGAGAATCGTGTGGTCTACTATTACAACAAGGAGACAAAGGACTGGAAAGTGCTGACGAAGATGCcggatgaaatcaacacaaaggGCTCTGGGATATGCACCATGTACAATTACCTATTCGTGGCAGGTGGAATCAAAAGGCAGGACGACAAAGGCAAAGTCTCGGACAAGGTGTTCTGCTACAACCCACTCACTGACAGCTGGAGCGAAATTCGACCGCTCACCGAGGGTCGGTCTCAGCTCAAACTGGTGGCCATGGACGGCTACCTGTTTGCAATCGGAGGGGAATGTCTCTTTACGGTAGAGAAATATGACCCTCGCCTGGATAGATGGCGCCCAGTGGCGCCACTACCAAAAGGGGCTTTTGCTATTGCGCACGAGGCAACAACCTGTAATGGAGAGATGTTCGTGTCCGGAGGCTCTCTATTTTATCGTCTGCTAAGATATGACACTAAAAGAGACGACTGGGAGGAATGTCCGTTCAACAACAGCAGGAAGAAATCCACCGACATGGTGGCATTCAAAAACTTCATCTACAGGTTTGATGTCAACCGTGACTACGGTGTCAACGTGTTCAAATACAACACAGTGGTAAAGATATGGCACAACAGTGCGTCCCTGGAGCAGACCAACCCCTTGCCCTTTCGCTGTGCTGTCATTGGCAACACCATTTACTGTGTGAACAAGTCCCAAACATTGCAGTTTGTTGTGGAAGAGGAGAATGAACAGTTTTTGCCTGAGGCACTGACACTCAAAGCACCTGTAGAGGCAAAAGGTGCCCTTGTCCCATTTGTCCTGGCTCTTCCCAAGACAGCCTGAGACAAATGCACAACAATGACCTCTTTGGAGACTCACTAAAAGTGGCCTCAGAATTGTCATATGAGGACAAAATATGTTGTGTTTGATAAAATACCCACAGTGcacaccacatcatttcaacacggataattgggtaatatttagTTGAGAAGTTGATAAATGAGATCAAGTCAAAAGTGagttgaattcccaatgtgttatcactcaCTATGCtctcaaccatctaaaagcacaaccaaattccaatggaaaaactaTGTCTGATTTTTGCTTTCGTTGCCATCCAAATGGCTATCACTGTGCTTTGAACCATTTAAAAGCGCTGCAAAGTTAAAATGGGAACGCAATatcagatattttgtttatttatacaacagattaatgtattatcactgtgcttcatcctAACAGCAGAACAAAAGTTGGATTGCAGTTGAAATTACATTAtaagtacatggtgcaagtgattAATGCCGTtcgatattctgcacagattattataGCAATTGTGAAGCTCTCCGCAGACCTGCAACAACCGACAGTATGCATGCTATCTTGACCATGCACGGTCTATATAATTAAATAAGAATACGTTtgtagttacagtaacctcaaatgTGGCCATGGATTTAAGATTGAATGTTACATTGGTTTGTAAaatagccttaactttaggctatttactgtatttcaaaagtaatattgaattgtgtttggttgacaacacatccaaaaatcaacatttaaaggatatttatctactgcttggatagttccatctgagccacCGACTTAATCCTATTCTTACATTTCAATTTTGGGTTTAGTTgaagacgtgaatccaacatatcatttGTTTTCCTGTCaacaagttaataggctattttTTTGTAGTTCAAAGGTGATATGGATTTGtatttggttgtcaacgcaaccaaatatcaacatttgaaggagatgaaTCTTCTGCCTGGTTAGTTCCATcagtgccactgacttagtctggctttatcCCAGTTTGTcaacaaattaataattgatatgttggattcacgtctccatctcaaccaaaaatctaagttaaagagtaggactaaatcaaatcaaactttaaatgcacttcaaATAAAGTTTTAGtagatttagtcctattctttaacttagatttatGGTTCCACCCAGCCTATATTTTCTTTCTGATAGCAGATATTATACTGATCAGTTCATTTGTATATTTATAATTAGTAGGATAATCTGTTTTAACAAACCTTTATTATATTTGTACttatgtattgtatattgttTGTTTGTGGTGTGGTTTTCATATAAACCCTTGGGTTTCCaaccacacctgcacacacaccgGTTTTCATTTTTTATATGTTTTCATCTGTATATTTGTCCATTACTTGTTTTCTTTTgtgcaaataaataaatcaaataaagttCTAATGTTGAATATCTGA

Function

NR:

description
kelch repeat and BTB domain-containing protein 11-like

GO: NA

KEGG:

id description
K10476 KBTBD11; kelch repeat and BTB domain-containing protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612364.2 True 3888 mRNA 0.42 1 32540258 32544145

Neighbor

gene id symbol gene type direction distance location
LOC110529231 LOC106571626 coding upstream 23524 32503138 ~ 32516734 (+)
LOC110529813 LOC106571626 coding upstream 36768 32495429 ~ 32503490 (+)
grcc10 cssa15h12orf57 coding upstream 251247 32287164 ~ 32289011 (+)
LOC110529802 ppp1cb coding upstream 271890 32256318 ~ 32268368 (+)
LOC110529800 LOC106571632 coding upstream 284420 32216576 ~ 32255838 (+)
rps7 LOC106608110 coding downstream 138287 32682432 ~ 32686606 (+)
LOC118965652 NA coding downstream 139554 32683699 ~ 32683923 (+)
LOC118965651 NA coding downstream 140560 32684705 ~ 32684929 (+)
LOC118965649 NA coding downstream 141085 32685230 ~ 32685454 (+)
LOC118965650 NA coding downstream 142022 32686167 ~ 32686391 (+)
G697813 NA non-coding upstream 2645 32537342 ~ 32537613 (+)
G697810 NA non-coding upstream 6035 32534010 ~ 32534223 (+)
G697809 NA non-coding upstream 6295 32533457 ~ 32533963 (+)
G697808 NA non-coding upstream 7092 32532864 ~ 32533166 (+)
G697800 NA non-coding upstream 10789 32529136 ~ 32529469 (+)
G697816 NA non-coding downstream 999 32545144 ~ 32545508 (+)
G697825 NA non-coding downstream 3533 32547678 ~ 32547880 (+)
G697847 NA non-coding downstream 18898 32563043 ~ 32563242 (+)
G697845 NA non-coding downstream 25870 32570015 ~ 32571972 (+)
G697884 NA non-coding downstream 120891 32665036 ~ 32665259 (+)
G694036 NA other upstream 2747511 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 3601985 28930668 ~ 28939888 (+)
G693207 NA other upstream 3834506 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 3981885 28495104 ~ 28605625 (+)
G692424 NA other upstream 4470030 28069900 ~ 28070228 (+)
G699605 NA other downstream 1583448 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 2910703 35454437 ~ 35462086 (+)
G700685 NA other downstream 3069019 35613164 ~ 35614666 (+)
G700864 NA other downstream 3359904 35904049 ~ 35904698 (+)
G702415 NA other downstream 4156293 36700438 ~ 36700739 (+)

Expression


Co-expression Network