LOC118965650


Basic Information

Item Value
gene id LOC118965650
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 32686167 ~ 32686391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053031.1
CCAACGTGGACATCCTGTGAGGTTGCTCTCACATGGCTCTGTCCTTGTGGCGTATGGGAGCGTAGCGCTTCACAGTGCTGTGACGTACAGTCCCGTTCCACGACGTTGGAGAGCAAGCTTTGTCCCCGGCCTTCGGGCTGGTGAGGACGGCGTTCTGTATATTCCTACATCTTCCCAGAGCCCTTTGGGCTGTGACTGGGGGGCTAAACCATGCAGTGTACAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053031.1 True 225 mRNA 0.57 1 32686167 32686391

Neighbor

gene id symbol gene type direction distance location
LOC118965649 NA coding upstream 713 32685230 ~ 32685454 (+)
LOC118965651 NA coding upstream 1238 32684705 ~ 32684929 (+)
LOC118965652 NA coding upstream 2244 32683699 ~ 32683923 (+)
LOC110529815 LOC106571624 coding upstream 142022 32540258 ~ 32544145 (+)
LOC110529231 LOC106571626 coding upstream 169433 32503138 ~ 32516734 (+)
allc allc coding downstream 5138 32691529 ~ 32696670 (+)
LOC110529823 LOC106571612 coding downstream 725327 33411718 ~ 33424020 (+)
LOC110529826 LOC106571610 coding downstream 749897 33436288 ~ 33445632 (+)
LOC118965509 LOC106571610 coding downstream 760030 33446421 ~ 33453220 (+)
sf3b6 sf3b6 coding downstream 793818 33480209 ~ 33484404 (+)
G697888 NA non-coding upstream 17128 32668837 ~ 32669039 (+)
G697884 NA non-coding upstream 20908 32665036 ~ 32665259 (+)
G697845 NA non-coding upstream 114195 32570015 ~ 32571972 (+)
G697847 NA non-coding upstream 122925 32563043 ~ 32563242 (+)
G697825 NA non-coding upstream 138287 32547678 ~ 32547880 (+)
G698066 NA non-coding downstream 98287 32784678 ~ 32784882 (+)
G698075 NA non-coding downstream 102859 32789250 ~ 32789520 (+)
G698100 NA non-coding downstream 118581 32804972 ~ 32805195 (+)
G698333 LOC106571616 non-coding downstream 291492 32977883 ~ 32981833 (+)
G698468 NA non-coding downstream 399267 33085658 ~ 33085897 (+)
G694036 NA other upstream 2893420 29790997 ~ 29792747 (+)
cdca4 LOC106571684 other upstream 3747894 28930668 ~ 28939888 (+)
G693207 NA other upstream 3980415 28704850 ~ 28705752 (+)
btbd7 btbd7 other upstream 4127794 28495104 ~ 28605625 (+)
G692424 NA other upstream 4615939 28069900 ~ 28070228 (+)
G699605 NA other downstream 1441202 34127593 ~ 34128301 (+)
LOC110529856 LOC106571576 other downstream 2768457 35454437 ~ 35462086 (+)
G700685 NA other downstream 2926773 35613164 ~ 35614666 (+)
G700864 NA other downstream 3217658 35904049 ~ 35904698 (+)
G702415 NA other downstream 4014047 36700438 ~ 36700739 (+)

Expression


Co-expression Network