Gene
RNA
| Item | Value |
|---|---|
| gene id | ankef1a |
| gene name | LOC106571587 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 34017010 ~ 34029131 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ankyrin repeat and EF-hand domain-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036985372.1 | False | 3535 | mRNA | 0.50 | 10 | 34017010 | 34029131 |
| TU795985 | True | 378 | TUCP | 0.59 | 2 | 34023291 | 34023885 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529840 | LOC106571603 | coding | downstream | 7633 | 33975488 ~ 34009377 (-) |
| LOC110529836 | LOC106571586 | coding | downstream | 175408 | 33831672 ~ 33841602 (-) |
| cdc42bpab | LOC106571585 | coding | downstream | 194772 | 33719374 ~ 33822238 (-) |
| LOC110529832 | fbxo16 | coding | downstream | 327958 | 33685369 ~ 33689052 (-) |
| LOC110529828 | LOC106571602 | coding | downstream | 467702 | 33484801 ~ 33549308 (-) |
| LOC110529846 | LOC106571592 | coding | upstream | 107427 | 34136558 ~ 34157637 (-) |
| LOC110529843 | LOC105030678 | coding | upstream | 226384 | 34255515 ~ 34257262 (-) |
| LOC110529848 | LOC106571583 | coding | upstream | 516025 | 34545156 ~ 34550128 (-) |
| LOC118965512 | NA | coding | upstream | 768714 | 34797845 ~ 34799304 (-) |
| LOC110529850 | fau | coding | upstream | 1273423 | 35302554 ~ 35304730 (-) |
| G699515 | NA | non-coding | downstream | 773 | 34015919 ~ 34016237 (-) |
| G699490 | NA | non-coding | downstream | 6847 | 34009945 ~ 34010163 (-) |
| G699487 | NA | non-coding | downstream | 47766 | 33968663 ~ 33969244 (-) |
| G699486 | NA | non-coding | downstream | 49583 | 33967135 ~ 33967427 (-) |
| G699480 | NA | non-coding | downstream | 57777 | 33959013 ~ 33959233 (-) |
| G699537 | NA | non-coding | upstream | 4090 | 34033221 ~ 34033456 (-) |
| G699582 | NA | non-coding | upstream | 80662 | 34109793 ~ 34110288 (-) |
| G699592 | NA | non-coding | upstream | 88531 | 34117662 ~ 34117891 (-) |
| G699730 | hs90a | non-coding | upstream | 141925 | 34171056 ~ 34177610 (-) |
| G699755 | NA | non-coding | upstream | 155201 | 34184332 ~ 34184851 (-) |
| G699468 | NA | other | downstream | 64654 | 33943022 ~ 33952356 (-) |
| G698356 | NA | other | downstream | 1026949 | 32989245 ~ 32990061 (-) |
| G697774 | LOC106571626 | other | downstream | 1517600 | 32498799 ~ 32499410 (-) |
| LOC110529804 | ypel5 | other | downstream | 1799461 | 32214451 ~ 32217572 (-) |
| LOC110529793 | LOC106571728 | other | downstream | 2337275 | 31657632 ~ 31703525 (-) |
| G701454 | NA | other | upstream | 1553867 | 35582998 ~ 35589877 (-) |
| LOC110529865 | LOC106571568 | other | upstream | 1612224 | 35633473 ~ 35705333 (-) |
| G701618 | LOC106571560 | other | upstream | 1871492 | 35900623 ~ 35918175 (-) |
| LOC110529880 | LOC106571768 | other | upstream | 3325965 | 37355096 ~ 37361922 (-) |
| LOC110530908 | otof | other | upstream | 3460096 | 37474229 ~ 37626960 (-) |
| G699531 | NA | non-coding | downstream | 4734 | 34018141 ~ 34018557 (-) |
