Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965512 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 34797845 ~ 34799304 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052865.1 | True | 740 | mRNA | 0.50 | 2 | 34797845 | 34799304 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529848 | LOC106571583 | coding | downstream | 247717 | 34545156 ~ 34550128 (-) |
| LOC110529843 | LOC105030678 | coding | downstream | 540583 | 34255515 ~ 34257262 (-) |
| LOC110529846 | LOC106571592 | coding | downstream | 640208 | 34136558 ~ 34157637 (-) |
| ankef1a | LOC106571587 | coding | downstream | 768714 | 34017010 ~ 34029131 (-) |
| LOC110529840 | LOC106571603 | coding | downstream | 788468 | 33975488 ~ 34009377 (-) |
| LOC110529850 | fau | coding | upstream | 503250 | 35302554 ~ 35304730 (-) |
| LOC110529851 | prpf39 | coding | upstream | 507624 | 35306928 ~ 35321805 (-) |
| LOC110529854 | LOC106571577 | coding | upstream | 627012 | 35426316 ~ 35429137 (-) |
| LOC110529855 | LOC106571575 | coding | upstream | 662969 | 35462273 ~ 35473852 (-) |
| LOC110529861 | LOC106571572 | coding | upstream | 738385 | 35537689 ~ 35546844 (-) |
| G700118 | NA | non-coding | downstream | 96595 | 34700992 ~ 34701250 (-) |
| G700111 | NA | non-coding | downstream | 100196 | 34697314 ~ 34697649 (-) |
| G700074 | NA | non-coding | downstream | 130027 | 34667323 ~ 34667818 (-) |
| G700066 | NA | non-coding | downstream | 137295 | 34660006 ~ 34660550 (-) |
| G700064 | NA | non-coding | downstream | 138246 | 34659312 ~ 34659599 (-) |
| G701052 | LOC106571582 | non-coding | upstream | 167226 | 34966530 ~ 34982777 (-) |
| G701151 | NA | non-coding | upstream | 311650 | 35110954 ~ 35118764 (-) |
| G701190 | NA | non-coding | upstream | 373994 | 35173298 ~ 35173518 (-) |
| G701204 | NA | non-coding | upstream | 388290 | 35187594 ~ 35188003 (-) |
| G701291 | NA | non-coding | upstream | 489845 | 35289149 ~ 35295336 (-) |
| G699468 | NA | other | downstream | 845489 | 33943022 ~ 33952356 (-) |
| G698356 | NA | other | downstream | 1807784 | 32989245 ~ 32990061 (-) |
| G697774 | LOC106571626 | other | downstream | 2298435 | 32498799 ~ 32499410 (-) |
| LOC110529804 | ypel5 | other | downstream | 2580296 | 32214451 ~ 32217572 (-) |
| G701454 | NA | other | upstream | 783694 | 35582998 ~ 35589877 (-) |
| LOC110529865 | LOC106571568 | other | upstream | 842051 | 35633473 ~ 35705333 (-) |
| G701618 | LOC106571560 | other | upstream | 1101319 | 35900623 ~ 35918175 (-) |
| LOC110529880 | LOC106571768 | other | upstream | 2555792 | 37355096 ~ 37361922 (-) |
| LOC110530908 | otof | other | upstream | 2689923 | 37474229 ~ 37626960 (-) |
