LOC110529855 (LOC106571575)


Basic Information

Item Value
gene id LOC110529855
gene name LOC106571575
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 35462273 ~ 35473852 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612460.2
GCACCACAGTCGCGCGCATGCACACGCACTCCGAAGCATACATTGGTTGATGCTGATCAGTACAATAATAAAGACTAGGCTATTCCTTCAGCTTGCTTCCGGATCGATATTGGCAGTTTATTGATATGATATTGAAGCTGTTGTAATATACAACCCTTTGTTTAAAGGAAAgcctggggaggggaggggggggggggggggcataccgCCCTTTGCAATGAGGTAAACATCATTCCCTTCTTTGACTCTGGCAGTTGAATCTCCACACCATTTGGGTGTGACCTGCCCCTGTCGCCTGACCCCTCCCTTCTAGCCACTGcgacccctctctccttctccatgtttACTTTGTggtgagagatgggagagatgctcTTCTCTGTGACCCTCCATCACCTCCTTCTGGCAGGGGTTTGTCTCTGCGTCTACAGCACCCCAGTTCCGCCCCTCCACGACTACGCACCCTCCACACAGGACAGTGGCTGTGATGGACAAGCTGGAGAGCCAATGGAGGGAGAGCCCTGTTTAACACCAGCAACACCTGCCAGTGTCATATCAACAAGTGTTCAATCTGGACCCTCTGATCCTGGCAGACTGTCCTATGGGATGGCAGAACACAGGACTGGCAGCTGGACTGACCTATCAGAGAATGTAGGAGCAGGGGGAGGCACTGGCCCAGATGTGGACGGAAGCGAACTAGGGGGGATAGAGCCAGTGACGCAGGTAGGAAACAGGGACAGTCATGGACGAGGAGTGGCTGGGGCTGAGAGCCAGGGGAGGGAGGCTAAGACGGGGGCTGCCTCTGAGAGCTTGTTTGAGGGGAAGGAGACTCACAGACAGCCTGCAGAAGCTCCAGAACTCTACACAGACAAAGAGATGAGAGTAGGGCCCGAAGAGAAAACCATGGAGAATGTACCTATTACCACCACTGGGGCAATGTTAGCTTCCATAGGAGAGAAGCACGGGATGACAGAGGCCGTGAATACATCTAGAGCTGCTTTACATGATGCCTCCGCAGCAGCCAGAGCCCCAGAGCCAGACAGCCAGTCAGGGACGCACCcagctggggagaggagagacctcATCCTAGAAGAGAGGCCAGACctccatggaggagaggagggggaagtcaGACAGAGCTTGACCGACGTCGGAGCTCCTCTTCTGAGCCAGGAGACAGAGACGACCAGACCAAGCTCCTTATCTCCCCAAAGCATCCTTAAACACTCACCTTTGACCTCCATCCCTCCGTCAGTATGGGGATCCAGAGGAGAAGCTTCATTGCTGCCCCCTAGTGGTCTAGAGGCCACCGGCCCTGCCACTCCGTGGCACCAAGATGGAGAGACAGCGCCTTCTCTCTCAAACCCCTCCCTGGCCGACCTTGGACCGGCCCTGACAGGATCCTCCAGACAGGATGACCCTGACAGCCTCTGGACTGAACCACTGCAGCGAAATGAGGCCATGGATGCCAGTGCCCCTCCCTTGCAGGACACGGCCACAGAGGGCACGATGTCCTCGGAGGACCTCCCTCTCATCTTCGAGCCCTTTGATGTCACACCCGAAGGGGCGGGGGTAGCAGCGGCCACTCTCTCGCCTGACAACTCACAGCCGTCTGTCGCCATGGTTACCACGGGGATGCTGCTGTCAGAGGCGGATCTCGATCAGGCGGTCACTGCGGATACAGATGACACAGGGCCATCCCGTGTTCCGTCCCCAGTGCTACCAGATTGGACGTCGCCATGGCAGACATCCGGGGCCGAGATCTCTGAGCCCATCAGCCCCTCTGGTTCACCGATAGACCCGCCGCCTTCAGAGGCAGAACAGCTAGTACACCAGTCTGACACAGATGGCGGTGAGACCATACAGAACCTAGAGGAAACCCCGCCAACATCCGAAACCAATCCTATAAGCACCACCTCCCAGCAGATTACCATGACAATGGTCACCAAGACAACCAAACTGCCTGCAGCCAAATCAGGTCTGGAGGAACTGGAGTCTGAAGAGGAgccagaggaggatgaggaggatgagaaCACGGAGGAGTCAGAGGAAGAGGACAGTGAAGAGGACCTGAATGAGACCCCCATCCCAGCCCCCACCCGACCTCCCTACAGCCTCATCCCCCCACCCCCTGTCTGGGTGCAGCGCAACCAGGGCCTGATGCGTAGATGGGTGGAACTGATCAGAGAAAAGgcAGGGTATGTGTCTGGGATGTTGGTCCCGGTGGGCATTGGCATCGCAGGGGCCCTGCTTATCGTTGGGGCCCTCTACAGCATCAGGATGATCCACCGTAAGAGGAACAGCTTCAAACACCAGCGCAGGAGGAAGGTCAGACACACCGAGCAACCCAGGGAGCCAAGCAGCAACGGGCAGGACCAAGCCATGCTATTGGCTGACAGCTCCGAGGACGAGTTCTGATCCCTCCCACATTTCCATGACTACCACATCGCCAATCACTATGGGCCGCCTGGCTATGAGACAATGGGGGAAGTTTGCGTACTACTGCCAGACGGGTGGGTTTTTGAAATGTAAAACATGGTAGAATGTTTGCACACCTACGTAGTTACAGGTGCACAGAGGGAAAATTATAGAACATTTTAAGAGACTCCAGGCTATTGACATTCTTGTATGATCAACAATGTGTTGATCACAACCCAGTTTGAGATCCTTTCAAACACACACTGCATAAAGCGATGTCAGTGTGTTGATGCCTCTTTTTTTTCCTAATGACTGGCTCTGTAATTAAAACGCTAGAGGGGACACCTACATCGCATACAATAGGCTCTCAGTTTATAAAGCTTAGCAGGGTTACATTTCAATAGtctaaagtggcttcctctccttgtctcctttcctacATTTTAGGAAGGAAGCCACTTCAGACTATAGAGATCCACATACTGGAGTAATATTGCCACATACTATATTGTTCATAGCACATCATAGACACTGGAAGAAGAAAAAGCATAAGCTCTCGGCATCAGTTGCATTAAGTAAATATGTATTGAAAACACTGACAGCGGTTCTTGGATTCAACCTTGTCAATTGTTGAAGGCCAAAGGCATGTCATCATCCTACTTTGAAAGCATGCAGCAGGAACCAGCTCTGTgtatctactgtgtgtgtgtgtacagtatactgATATTTTTCCTCTTGTTGCTCCTCCTGACAACGTTAGGTTTTTCCTCCAGTGCATGGCAACAACCTTTTTCATAACTGTATATACAAGGCTAATACTTAATTAATCATCTCTATATCATTTCCCATTTAATCGTCCATTACTCTACAGAAAGCCCAAGTCATTTGGAGTCATTACAGACACGCTGACGGATTTGTAAAGGGAGACCACTTGTATTGTTCACTCAGCTTCTGTCCTGTACTGTATGGTTGTTTTTCCAAACAGTGTAGCAATAGAATGTTCTTAATTTGCACTGGTACCTGAAAGGACAGCAGGTTGAcgtttgtcatgaatcttgcccttgAGGTGGAATGGAGCCATttccgctagatgggccagcttcaaagtcaaaattggctattgtaaaaatgtatgaaaacaaaatGTAGCTTTAGatttaaggttagacattagggttagcagtgtggttaaggttaggttaaaaaaaatctgattttaggactttgtggctgtgccagctagtgactacTCTCTAAAGCTGCCTcaagaacaagattcatgatggTAAAAAAAAGTCAGGTGAAAGGCTCAGCATCCTCGAGTTTTGGCTATCAGCCCCTCTTACGCTCTCTGCTACAGCGTTGATGCCACTGGGATCTAAATTCATCTCTTTATTTAGTTCTGTGGTTGATCTAAACTGTCTGCCTTTAAGCACTAAATATCACAAAGGTGTTTTCAAAAATCAAATTCCATGTATTTAAGTAATCTTGCATTGCTATTTATAGTAGTCACTCATTTCAAGTCTGTGAAATGTGTCATTTTGTGTGACCGTCTCCTGGTAGGTTGCTTGAGATAAGCCTGTGAATATGCAATAATACTGTATCATATGGGTTCTGTAAAATTGTCAACATTTGTCTTTCTTTCTATAGATATCAAATGTGAAGTATTTACCAATAAAGCTCTGTTTGGGAAGGGC
>XM_021612462.2
AGCACCACAGTCGCGCGCATGCACACGCACTCCGAAGCATACATTGGTTGATGCTGATCAGTACAATAATAAAGACTAGGCTATTCCTTCAGCTTGCTTCCGGATCGATATTGGCAGTTTATTGATATGATATTGAAGCTGTTGTAATATACAACCCTTTGTTTAAAGGAAAgcctggggaggggaggggggggggggggggcataccgCCCTTTGCAATGAGGTAAACATCATTCCCTTCTTTGACTCTGGCAGTTGAATCTCCACACCATTTGGGTGTGACCTGCCCCTGTCGCCTGACCCCTCCCTTCTAGCCACTGcgacccctctctccttctccatgtttACTTTGTggtgagagatgggagagatgctcTTCTCTGTGACCCTCCATCACCTCCTTCTGGCAGGGGTTTGTCTCTGCGTCTACAGCACCCCAGTTCCGCCCCTCCACGACTACGCACCCTCCACACAGGACAGTGGCTGTGATGGACAAGCTGGAGAGCCAATGGAGGGAGAGCCCTGTTTAACACCAGCAACACCTGCCAGTGTCATATCAACAAGTGTTCAATCTGGACCCTCTGATCCTGGCAGACTGTCCTATGGGATGGCAGAACACAGGACTGGCAGCTGGACTGACCTATCAGAGAATGTAGGAGCAGGGGGAGGCACTGGCCCAGATGTGGACGGAAGCGAACTAGGGGGGATAGAGCCAGTGACGCAGGTAGGAAACAGGGACAGTCATGGACGAGGAGTGGCTGGGGCTGAGAGCCAGGGGAGGGAGGCTAAGACGGGGGCTGCCTCTGAGAGCTTGTTTGAGGGGAAGGAGACTCACAGACAGCCTGCAGAAGCTCCAGAACTCTACACAGACAAAGAGATGAGAGTAGGGCCCGAAGAGAAAACCATGGAGAATGTACCTATTACCACCACTGGGGCAATGTTAGCTTCCATAGGAGAGAAGCACGGGATGACAGAGGCCGTGAATACATCTAGAGCTGCTTTACATGATGCCTCCGCAGCAGCCAGAGCCCCAGAGCCAGACAGCCAGTCAGGGACGCACCcagctggggagaggagagacctcATCCTAGAAGAGAGGCCAGACctccatggaggagaggagggggaagtcaGACAGAGCTTGACCGACGTCGGAGCTCCTCTTCTGAGCCAGGAGACAGAGACGACCAGACCAAGCTCCTTATCTCCCCAAAGCATCCTTAAACACTCACCTTTGACCTCCATCCCTCCGTCAGTATGGGGATCCAGAGGAGAAGCTTCATTGCTGCCCCCTAGTGGTCTAGAGGCCACCGGCCCTGCCACTCCGTGGCACCAAGATGGAGAGACAGCGCCTTCTCTCTCAAACCCCTCCCTGGCCGACCTTGGACCGGCCCTGACAGGATCCTCCAGACAGGATGACCCTGACAGCCTCTGGACTGAACCACTGCAGCGAAATGAGGCCATGGATGCCAGTGCCCCTCCCTTGCAGGACACGGCCACAGAGGGCACGATGTCCTCGGAGGACCTCCCTCTCATCTTCGAGCCCTTTGATGTCACACCCGAAGGGGCGGGGGTAGCAGCGGCCACTCTCTCGCCTGACAACTCACAGCCGTCTGTCGCCATGGTTACCACGGGGATGCTGCTGTCAGAGGCGGATCTCGATCAGGCGGTCACTGCGGATACAGATGACACAGGGCCATCCCGTGTTCCGTCCCCAGTGCTACCAGATTGGACGTCGCCATGGCAGACATCCGGGGCCGAGATCTCTGAGCCCATCAGCCCCTCTGGTTCACCGATAGACCCGCCGCCTTCAGAGGCAGAACAGCTAGTACACCAGTCTGACACAGATGGCGGTGAGACCATACAGAACCTAGAGGAAACCCCGCCAACATCCGAAACCAATCCTATAAGCACCACCTCCCAGCAGATTACCATGACAATGGTCACCAAGACAACCAAACTGCCTGCAGCCAAATCAGGTCTGGAGGAACTGGAGTCTGAAGAGGAgccagaggaggatgaggaggatgagaaCACGGAGGAGTCAGAGGAAGAGGACAGTGAAGAGGACCTGAATGAGACCCCCATCCCAGCCCCCACCCGACCTCCCTACAGCCTCATCCCCCCACCCCCTGTCTGGGTGCAGCGCAACCAGGGCCTGATGCGTAGATGGGTGGAACTGATCAGAGAAAAGgcAGGGTATGTGTCTGGGATGTTGGTCCCGGTGGGCATTGGCATCGCAGGGGCCCTGCTTATCGTTGGGGCCCTCTACAGCATCAGGATGATCCACCGTAAGAGGAACAGCTTCAAACACCAGCGCAGGAGGAAGCAACCCAGGGAGCCAAGCAGCAACGGGCAGGACCAAGCCATGCTATTGGCTGACAGCTCCGAGGACGAGTTCTGATCCCTCCCACATTTCCATGACTACCACATCGCCAATCACTATGGGCCGCCTGGCTATGAGACAATGGGGGAAGTTTGCGTACTACTGCCAGACGGGTGGGTTTTTGAAATGTAAAACATGGTAGAATGTTTGCACACCTACGTAGTTACAGGTGCACAGAGGGAAAATTATAGAACATTTTAAGAGACTCCAGGCTATTGACATTCTTGTATGATCAACAATGTGTTGATCACAACCCAGTTTGAGATCCTTTCAAACACACACTGCATAAAGCGATGTCAGTGTGTTGATGCCTCTTTTTTTTCCTAATGACTGGCTCTGTAATTAAAACGCTAGAGGGGACACCTACATCGCATACAATAGGCTCTCAGTTTATAAAGCTTAGCAGGGTTACATTTCAATAGtctaaagtggcttcctctccttgtctcctttcctacATTTTAGGAAGGAAGCCACTTCAGACTATAGAGATCCACATACTGGAGTAATATTGCCACATACTATATTGTTCATAGCACATCATAGACACTGGAAGAAGAAAAAGCATAAGCTCTCGGCATCAGTTGCATTAAGTAAATATGTATTGAAAACACTGACAGCGGTTCTTGGATTCAACCTTGTCAATTGTTGAAGGCCAAAGGCATGTCATCATCCTACTTTGAAAGCATGCAGCAGGAACCAGCTCTGTgtatctactgtgtgtgtgtgtacagtatactgATATTTTTCCTCTTGTTGCTCCTCCTGACAACGTTAGGTTTTTCCTCCAGTGCATGGCAACAACCTTTTTCATAACTGTATATACAAGGCTAATACTTAATTAATCATCTCTATATCATTTCCCATTTAATCGTCCATTACTCTACAGAAAGCCCAAGTCATTTGGAGTCATTACAGACACGCTGACGGATTTGTAAAGGGAGACCACTTGTATTGTTCACTCAGCTTCTGTCCTGTACTGTATGGTTGTTTTTCCAAACAGTGTAGCAATAGAATGTTCTTAATTTGCACTGGTACCTGAAAGGACAGCAGGTTGAcgtttgtcatgaatcttgcccttgAGGTGGAATGGAGCCATttccgctagatgggccagcttcaaagtcaaaattggctattgtaaaaatgtatgaaaacaaaatGTAGCTTTAGatttaaggttagacattagggttagcagtgtggttaaggttaggttaaaaaaaatctgattttaggactttgtggctgtgccagctagtgactacTCTCTAAAGCTGCCTcaagaacaagattcatgatggTAAAAAAAAGTCAGGTGAAAGGCTCAGCATCCTCGAGTTTTGGCTATCAGCCCCTCTTACGCTCTCTGCTACAGCGTTGATGCCACTGGGATCTAAATTCATCTCTTTATTTAGTTCTGTGGTTGATCTAAACTGTCTGCCTTTAAGCACTAAATATCACAAAGGTGTTTTCAAAAATCAAATTCCATGTATTTAAGTAATCTTGCATTGCTATTTATAGTAGTCACTCATTTCAAGTCTGTGAAATGTGTCATTTTGTGTGACCGTCTCCTGGTAGGTTGCTTGAGATAAGCCTGTGAATATGCAATAATACTGTATCATATGGGTTCTGTAAAATTGTCAACATTTGTCTTTCTTTCTATAGATATCAAATGTGAAGTATTTACCAATAAAGCTCTGTTTGGGAAGGGC

Function

NR:

description
uncharacterized protein C14orf37-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612460.2 False 4115 mRNA 0.50 8 35462273 35473851
XM_021612462.2 True 4101 mRNA 0.50 8 35462273 35473852

Neighbor

gene id symbol gene type direction distance location
LOC110529854 LOC106571577 coding downstream 33136 35426316 ~ 35429137 (-)
LOC110529851 prpf39 coding downstream 140468 35306928 ~ 35321805 (-)
LOC110529850 fau coding downstream 157543 35302554 ~ 35304730 (-)
LOC118965512 NA coding downstream 662969 34797845 ~ 34799304 (-)
LOC110529848 LOC106571583 coding downstream 912145 34545156 ~ 34550128 (-)
LOC110529861 LOC106571572 coding upstream 63837 35537689 ~ 35546844 (-)
LOC110529862 LOC106571571 coding upstream 79556 35553221 ~ 35608497 (-)
LOC110529864 LOC106571569 coding upstream 154300 35628152 ~ 35632437 (-)
LOC110529865 LOC106571568 coding upstream 159621 35633473 ~ 35705333 (-)
LOC110529866 LOC106571566 coding upstream 234189 35708041 ~ 35798020 (-)
G701353 NA non-coding downstream 51115 35410941 ~ 35411158 (-)
G701291 NA non-coding downstream 166937 35289149 ~ 35295336 (-)
G701204 NA non-coding downstream 274270 35187594 ~ 35188003 (-)
G701190 NA non-coding downstream 288755 35173298 ~ 35173518 (-)
G701151 NA non-coding downstream 343509 35110954 ~ 35118764 (-)
G701395 NA non-coding upstream 186498 35660350 ~ 35679252 (-)
G701486 NA non-coding upstream 248221 35722073 ~ 35722772 (-)
G701522 NA non-coding upstream 258389 35732241 ~ 35732648 (-)
G701533 NA non-coding upstream 287856 35761708 ~ 35761938 (-)
ankef1a LOC106571587 other downstream 1438388 34017010 ~ 34029131 (-)
G699468 NA other downstream 1509917 33943022 ~ 33952356 (-)
G698356 NA other downstream 2472212 32989245 ~ 32990061 (-)
G697774 LOC106571626 other downstream 2962863 32498799 ~ 32499410 (-)
LOC110529804 ypel5 other downstream 3244724 32214451 ~ 32217572 (-)
G701454 NA other upstream 109146 35582998 ~ 35589877 (-)
G701618 LOC106571560 other upstream 426771 35900623 ~ 35918175 (-)
LOC110529880 LOC106571768 other upstream 1881244 37355096 ~ 37361922 (-)
LOC110530908 otof other upstream 2015375 37474229 ~ 37626960 (-)

Expression


Co-expression Network