LOC110529861 (LOC106571572)


Basic Information

Item Value
gene id LOC110529861
gene name LOC106571572
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 35537689 ~ 35546844 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612473.2
ccaattgtgcaccaccctatgggactcccaatcacggcgggttgtgatacagcctggaatcaaaccagggtctgtagtgacgtctctagcactgagatgcagtgcatttagaccgctgagccactctgGCAAAACAGTTGTAAGGGGAGTACTGTACATTTGTCTAACAATCCTGCTTGGTGGAAGTGTCAACGTCATCCTCCAGAAGGCTCCCTTCTGATTGGTGAATGGCTAGTTAGGGTGTGGTTAAAGTGCATATAACTGTATGCTATTGCTTTGGGGCTCTTCTGTTGGTTGTTGCTTCTAGTTGGGACCTTGTGTTGTCTATCCAGTTAGGTCAGGACTCAGGAGCAGTGTCAATTATCTAGCGTGCTGTTGGCTAAACTAAACTTTCCTCTGCATGACTGCCTCAGTGTCCACTCTCCTATTAGTTGAGTTGACTAAGATACCCTTCAGTCCCTCAGTTTTAGCCTAATCCTCCTGGCCTCGTACCCATCAGAGGGACACTCATCTCCTACTCCTTCCCCAAGAGATGTCTTCCCAGGCTTCTCTCCGACCTGCGGTGGTCCTGTCACTGGTTCTGGTTGTGTGGGCTCTGACAGGGCTGACCCATGCCCAGCCCAAGGCTTCTGTCCTGGACTTCTCAGCCAGCCTGGGTAACCTCCTCCCAAGCCTCAGCCGACCAGCCAACTCCAGCCAGATCTTCTATGGGGTAATGTTTGACGCTGGCAGCACTGGCACACGCATCCACGTCTATACCTTCATACAGAAAGACCCTGAGGAGTTACCAGTGCTGGATAATGAGATGTTCCATTCCATCAAGCCTGGTCTGTCAGCATACGCAGACATGCCTGAAATGGGTGGGTACACAGTGAGGCAGCTTCTGAAAGTGGCTAAGAAAACCGTCCCCCGGCTGGAATGGAAGAGAACCCCGCTGGTCTTGAAAGCTACAGCAGGACTCAGGCTGCTGCCCTCAGAGAAAGCCCAGGCTCTACTGGAACAGGTGCAGGATGTTTTTAATGAATCTCCCTTCTTCGTCCCAGACGATAGCGTCAGCATAATGAATGGTACAAATGAAGGAATCTTGGCGTGGGTTACTGTGAACTTTTTGACAGGTCACCTGTATGCTGAGACCAGGAAGACAGTGGGGATTCTGGATCTGGGGGGAGGATCGACTCAAATCACTTTTCTTCCTAAATCCAAGAAAACCATTGGAAGTTCTCCTGATGACTACATTGCCAGAATTGACATGTTCAACTCGACATATGAACTCTACACTCACAGCTACCTGGGTAATGGACTGATGGCAGCTAGACTGGCAGCCCTAGGAGCACTGGGGGCAGACGGGTTAGAGTGGAGAGTGTTCAAAAGCTCCTGCCTGCCTAAGAAGTTCAGAGAGGAGTGGAGCTTTGGAGGACTCACCTACATAGTCAGTGGGAAACCTGATGGTTATGTGGGATACAAGCTGTGTTACCAGGAAGTGCTGAAGGTGGTAAAGGGCATAGTTCACCAGCCCTATGAGTTGAAAGACACCAGTGTGTTCTACGCTTTCTCCTATTACTTTGACCGAGCCGTGGATGCAGGCCTTATTGACAGGACCCAAGGAGGAATGCTGGAGGTCAGGGACTTAAAGAAGAGAGCTAAAGAGGTGTGTAACAAGATGTCTAAGTACCGTCCGATCAACCCCTTCCTGTGTATGGACATGACCTATATCACCTGTCTGCTCAAAGACGGCTTTGGCTTCAAGGAGAACACTGTACTGCAGCTGACTAAGAAAGTCAACAACGTGGAGACAAGCTGGGCTTTAGGTGCCACGTTCAACCACTTCCAGAACCTAAAGATCCACAGATAGACAAGGAGCCACGGGTCTGGGTGGGCAGGAGGGGAAAACCACTGGATTAGATGGTGCTCAAAAATAAATGGACTGAGGAATTATTGTTGTTTTAAACATAAACAGCCTTTGTTCCTGCCTTGTTGTGGATTGTAATGTCTTAAAAATATGCCTTGCATCTTTGACTTACTATTTGACTATGAAGATTTGACATTTCTGAGATAACATTACAATTGTTACAACTATTTTTGTTACCCAACACCTAAATGGTTGGTCCTATAGTTCAGTAGGTCTGTTGTTTTCATGTGACTGGTTGCTATAGCACAGTGGTCTCATATTATTTACATCTCTATTAAAGCACTGGGGGCTGTCGCTGACTGAAATGCCACTATAGTTGTGTTACTGTATAAAAAGGTGGATATTTTGACCGTCTGTTTAATATCACTTGGGTGTGATctttattttcattaaaaaaataaactggTATGAGAGTGTGCTTTG
>XM_021612474.2
gtagtgtatatttatGAATAATTGTGTTAACAAATAGGTACGTGTGTTGCAACATTGTTGTTTTGCAGCATCAATAGGGCGAAGAGCCATGAGGTCACGTTCATGAGCACAACATTGATGACGTAGGTACACCCTCCAGTTTAGCTGTAGCAGGTGGATGTTGACATGAATAGTAAaatcattagctagctagatatgtaTTTTTTCTTATGGCTGTGACGACCTGTATTGCCCGAGAAGAAATGTATATCATTTTGTTTTATTTGCAGTACATTTTGTGGTCTCTTCGGGAAGAAGTCACTGATTAGCCTAGTTAGATAGCTAGCACGTTAGCTGTCAATTGGTAAATCGTGCAACGGCATGGGTCAACTGCTGTCAGAAATGAGCTCAATATAAACTTTTGTGCCTATTTTATTCCAAGCATTTATTTACAGAACATGCCACTATATAGGTAGCAGCTATCGTTTCTTTATTTGCATGCAgtgtaagttagctagctagcacaaaAATGTGTTAATTAAAGAAATGTAGGCGAGTCGACAAGGCAGGACCATGACATTATCAGAGTCCCTCAGTTTTAGCCTAATCCTCCTGGCCTCGTACCCATCAGAGGGACACTCATCTCCTACTCCTTCCCCAAGAGATGTCTTCCCAGGCTTCTCTCCGACCTGCGGTGGTCCTGTCACTGGTTCTGGTTGTGTGGGCTCTGACAGGGCTGACCCATGCCCAGCCCAAGGCTTCTGTCCTGGACTTCTCAGCCAGCCTGGGTAACCTCCTCCCAAGCCTCAGCCGACCAGCCAACTCCAGCCAGATCTTCTATGGGGTAATGTTTGACGCTGGCAGCACTGGCACACGCATCCACGTCTATACCTTCATACAGAAAGACCCTGAGGAGTTACCAGTGCTGGATAATGAGATGTTCCATTCCATCAAGCCTGGTCTGTCAGCATACGCAGACATGCCTGAAATGGGTGGGTACACAGTGAGGCAGCTTCTGAAAGTGGCTAAGAAAACCGTCCCCCGGCTGGAATGGAAGAGAACCCCGCTGGTCTTGAAAGCTACAGCAGGACTCAGGCTGCTGCCCTCAGAGAAAGCCCAGGCTCTACTGGAACAGGTGCAGGATGTTTTTAATGAATCTCCCTTCTTCGTCCCAGACGATAGCGTCAGCATAATGAATGGTACAAATGAAGGAATCTTGGCGTGGGTTACTGTGAACTTTTTGACAGGTCACCTGTATGCTGAGACCAGGAAGACAGTGGGGATTCTGGATCTGGGGGGAGGATCGACTCAAATCACTTTTCTTCCTAAATCCAAGAAAACCATTGGAAGTTCTCCTGATGACTACATTGCCAGAATTGACATGTTCAACTCGACATATGAACTCTACACTCACAGCTACCTGGGTAATGGACTGATGGCAGCTAGACTGGCAGCCCTAGGAGCACTGGGGGCAGACGGGTTAGAGTGGAGAGTGTTCAAAAGCTCCTGCCTGCCTAAGAAGTTCAGAGAGGAGTGGAGCTTTGGAGGACTCACCTACATAGTCAGTGGGAAACCTGATGGTTATGTGGGATACAAGCTGTGTTACCAGGAAGTGCTGAAGGTGGTAAAGGGCATAGTTCACCAGCCCTATGAGTTGAAAGACACCAGTGTGTTCTACGCTTTCTCCTATTACTTTGACCGAGCCGTGGATGCAGGCCTTATTGACAGGACCCAAGGAGGAATGCTGGAGGTCAGGGACTTAAAGAAGAGAGCTAAAGAGGTGTGTAACAAGATGTCTAAGTACCGTCCGATCAACCCCTTCCTGTGTATGGACATGACCTATATCACCTGTCTGCTCAAAGACGGCTTTGGCTTCAAGGAGAACACTGTACTGCAGCTGACTAAGAAAGTCAACAACGTGGAGACAAGCTGGGCTTTAGGTGCCACGTTCAACCACTTCCAGAACCTAAAGATCCACAGATAGACAAGGAGCCACGGGTCTGGGTGGGCAGGAGGGGAAAACCACTGGATTAGATGGTGCTCAAAAATAAATGGACTGAGGAATTATTGTTGTTTTAAACATAAACAGCCTTTGTTCCTGCCTTGTTGTGGATTGTAATGTCTTAAAAATATGCCTTGCATCTTTGACTTACTATTTGACTATGAAGATTTGACATTTCTGAGATAACATTACAATTGTTACAACTATTTTTGTTACCCAACACCTAAATGGTTGGTCCTATAGTTCAGTAGGTCTGTTGTTTTCATGTGACTGGTTGCTATAGCACAGTGGTCTCATATTATTTACATCTCTATTAAAGCACTGGGGGCTGTCGCTGACTGAAATGCCACTATAGTTGTGTTACTGTATAAAAAGGTGGATATTTTGACCGTCTGTTTAATATCACTTGGGTGTGATctttattttcattaaaaaaataaactggTATGAGAGTGTGCTTTG
>XM_021612475.2
gtagtgtatatttatGAATAATTGTGTTAACAAATAGGTACGTGTGTTGCAACATTGTTGTTTTGCAGCATCAATAGGGCGAAGAGCCATGAGGTCACGTTCATGAGCACAACATTGATGACGTAGGTACACCCTCCAGTTTAGCTGTAGCAGGTGGATGTTGACATGAATAGTAAaatcattagctagctagatatgtaTTTTTTCTTATGGCTGTGACGACCTGTATTGCCCGAGAAGAAATGTATATCATTTTGTTTTATTTGCAGTACATTTTGTGGTCTCTTCGGGAAGAAGTCACTGATTAGCCTAGTTAGATAGCTAGCACGTTAGCTGTCAATTGGTAAATCGTGCAACGGCATGGGTCAACTGCTGTCAGAAATGAGCTCAATATAAACTTTTGTGCCTATTTTATTCCAAGCATTTATTTACAGAACATGCCACTATATAGGTAGCAGCTATCGTTTCTTTATTTGCATGCAgtgtaagttagctagctagcacaaaAATGTGTTAATTAAAGAAATGTAGGCGAGTCGACAAGGCAGGACCATGACATTATCAGAGAGATGTCTTCCCAGGCTTCTCTCCGACCTGCGGTGGTCCTGTCACTGGTTCTGGTTGTGTGGGCTCTGACAGGGCTGACCCATGCCCAGCCCAAGGCTTCTGTCCTGGACTTCTCAGCCAGCCTGGGTAACCTCCTCCCAAGCCTCAGCCGACCAGCCAACTCCAGCCAGATCTTCTATGGGGTAATGTTTGACGCTGGCAGCACTGGCACACGCATCCACGTCTATACCTTCATACAGAAAGACCCTGAGGAGTTACCAGTGCTGGATAATGAGATGTTCCATTCCATCAAGCCTGGTCTGTCAGCATACGCAGACATGCCTGAAATGGGTGGGTACACAGTGAGGCAGCTTCTGAAAGTGGCTAAGAAAACCGTCCCCCGGCTGGAATGGAAGAGAACCCCGCTGGTCTTGAAAGCTACAGCAGGACTCAGGCTGCTGCCCTCAGAGAAAGCCCAGGCTCTACTGGAACAGGTGCAGGATGTTTTTAATGAATCTCCCTTCTTCGTCCCAGACGATAGCGTCAGCATAATGAATGGTACAAATGAAGGAATCTTGGCGTGGGTTACTGTGAACTTTTTGACAGGTCACCTGTATGCTGAGACCAGGAAGACAGTGGGGATTCTGGATCTGGGGGGAGGATCGACTCAAATCACTTTTCTTCCTAAATCCAAGAAAACCATTGGAAGTTCTCCTGATGACTACATTGCCAGAATTGACATGTTCAACTCGACATATGAACTCTACACTCACAGCTACCTGGGTAATGGACTGATGGCAGCTAGACTGGCAGCCCTAGGAGCACTGGGGGCAGACGGGTTAGAGTGGAGAGTGTTCAAAAGCTCCTGCCTGCCTAAGAAGTTCAGAGAGGAGTGGAGCTTTGGAGGACTCACCTACATAGTCAGTGGGAAACCTGATGGTTATGTGGGATACAAGCTGTGTTACCAGGAAGTGCTGAAGGTGGTAAAGGGCATAGTTCACCAGCCCTATGAGTTGAAAGACACCAGTGTGTTCTACGCTTTCTCCTATTACTTTGACCGAGCCGTGGATGCAGGCCTTATTGACAGGACCCAAGGAGGAATGCTGGAGGTCAGGGACTTAAAGAAGAGAGCTAAAGAGGTGTGTAACAAGATGTCTAAGTACCGTCCGATCAACCCCTTCCTGTGTATGGACATGACCTATATCACCTGTCTGCTCAAAGACGGCTTTGGCTTCAAGGAGAACACTGTACTGCAGCTGACTAAGAAAGTCAACAACGTGGAGACAAGCTGGGCTTTAGGTGCCACGTTCAACCACTTCCAGAACCTAAAGATCCACAGATAGACAAGGAGCCACGGGTCTGGGTGGGCAGGAGGGGAAAACCACTGGATTAGATGGTGCTCAAAAATAAATGGACTGAGGAATTATTGTTGTTTTAAACATAAACAGCCTTTGTTCCTGCCTTGTTGTGGATTGTAATGTCTTAAAAATATGCCTTGCATCTTTGACTTACTATTTGACTATGAAGATTTGACATTTCTGAGATAACATTACAATTGTTACAACTATTTTTGTTACCCAACACCTAAATGGTTGGTCCTATAGTTCAGTAGGTCTGTTGTTTTCATGTGACTGGTTGCTATAGCACAGTGGTCTCATATTATTTACATCTCTATTAAAGCACTGGGGGCTGTCGCTGACTGAAATGCCACTATAGTTGTGTTACTGTATAAAAAGGTGGATATTTTGACCGTCTGTTTAATATCACTTGGGTGTGATctttattttcattaaaaaaataaactggTATGAGAGTGTGCTTTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K01511 ENTPD5_6; ectonucleoside triphosphate diphosphohydrolase 5/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612473.2 False 2332 mRNA 0.47 13 35537689 35545104
XM_021612474.2 False 2443 mRNA 0.45 14 35537689 35546844
XM_021612475.2 True 2369 mRNA 0.45 14 35537689 35546844

Neighbor

gene id symbol gene type direction distance location
LOC110529855 LOC106571575 coding downstream 63837 35462273 ~ 35473852 (-)
LOC110529854 LOC106571577 coding downstream 108552 35426316 ~ 35429137 (-)
LOC110529851 prpf39 coding downstream 215884 35306928 ~ 35321805 (-)
LOC110529850 fau coding downstream 232959 35302554 ~ 35304730 (-)
LOC118965512 NA coding downstream 738385 34797845 ~ 34799304 (-)
LOC110529862 LOC106571571 coding upstream 6564 35553221 ~ 35608497 (-)
LOC110529864 LOC106571569 coding upstream 81308 35628152 ~ 35632437 (-)
LOC110529865 LOC106571568 coding upstream 86629 35633473 ~ 35705333 (-)
LOC110529866 LOC106571566 coding upstream 161197 35708041 ~ 35798020 (-)
LOC118936680 LOC106571560 coding upstream 354807 35901651 ~ 35906701 (-)
G701362 NA non-coding downstream 35044 35458052 ~ 35502645 (-)
G701353 NA non-coding downstream 126531 35410941 ~ 35411158 (-)
G701291 NA non-coding downstream 242353 35289149 ~ 35295336 (-)
G701204 NA non-coding downstream 349686 35187594 ~ 35188003 (-)
G701190 NA non-coding downstream 364171 35173298 ~ 35173518 (-)
G701395 NA non-coding upstream 113506 35660350 ~ 35679252 (-)
G701486 NA non-coding upstream 175229 35722073 ~ 35722772 (-)
G701522 NA non-coding upstream 185397 35732241 ~ 35732648 (-)
G701533 NA non-coding upstream 214864 35761708 ~ 35761938 (-)
ankef1a LOC106571587 other downstream 1513804 34017010 ~ 34029131 (-)
G699468 NA other downstream 1585333 33943022 ~ 33952356 (-)
G698356 NA other downstream 2547628 32989245 ~ 32990061 (-)
G697774 LOC106571626 other downstream 3038279 32498799 ~ 32499410 (-)
LOC110529804 ypel5 other downstream 3320140 32214451 ~ 32217572 (-)
G701454 NA other upstream 36154 35582998 ~ 35589877 (-)
G701618 LOC106571560 other upstream 353779 35900623 ~ 35918175 (-)
LOC110529880 LOC106571768 other upstream 1808252 37355096 ~ 37361922 (-)
LOC110530908 otof other upstream 1942383 37474229 ~ 37626960 (-)

Expression


Co-expression Network